Experiment set1S558 for Paraburkholderia sabiae LMG 24235
Fumaric acid carbon source
Group: carbon sourceMedia: AB_minimal medium + Fumaric acid (20 mM)
Culturing: Psabiae_ML3b, tube, Aerobic, at 28 (C), shaken=180 rpm
By: Marta Torres on 12/5/24
Specific Phenotypes
For 1 genes in this experiment
For carbon source Fumaric acid in Paraburkholderia sabiae LMG 24235
For carbon source Fumaric acid across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Coenzyme B12 biosynthesis | 1 |
| Dissimilatory nitrite reductase | 1 |
| Experimental tye | 1 |
| Heme and Siroheme Biosynthesis | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| siroheme biosynthesis | 4 | 3 | 3 |
| factor 430 biosynthesis | 7 | 3 | 3 |
| cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) | 15 | 14 | 3 |
| cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation) | 13 | 12 | 2 |
| adenosylcobalamin biosynthesis I (anaerobic) | 36 | 31 | 3 |
| adenosylcobalamin biosynthesis II (aerobic) | 33 | 31 | 2 |