Experiment set1S553 for Paraburkholderia sabiae LMG 24235

Compare to:

D-Glucose carbon source

200 most important genes:

  gene name fitness t score description  
QEN71_RS01445 -4.7 -7.9 2,3-diphosphoglycerate-dependent phosphoglycerate mutase compare
QEN71_RS27825 -4.6 -9.7 phosphoribosyl-ATP diphosphatase compare
QEN71_RS00290 -4.3 -19.8 homoserine O-acetyltransferase compare
QEN71_RS04070 -4.2 -14.4 prephenate dehydratase compare
QEN71_RS27835 -4.2 -14.2 imidazole glycerol phosphate synthase subunit HisF compare
QEN71_RS26920 -4.2 -21.2 phosphogluconate dehydratase compare
QEN71_RS25260 -4.2 -15.5 CysB family HTH-type transcriptional regulator compare
QEN71_RS25220 -4.1 -4.4 CbiX/SirB N-terminal domain-containing protein compare
QEN71_RS09235 -4.1 -14.1 argininosuccinate synthase compare
QEN71_RS27840 -4.1 -13.5 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
QEN71_RS17655 -4.1 -16.0 tryptophan synthase subunit alpha compare
QEN71_RS27855 -4.0 -10.0 imidazoleglycerol-phosphate dehydratase HisB compare
QEN71_RS29480 -4.0 -20.2 cation:proton antiporter compare
QEN71_RS04065 -4.0 -14.3 3-phosphoserine/phosphohydroxythreonine transaminase compare
QEN71_RS24225 -4.0 -19.6 acetolactate synthase 3 catalytic subunit compare
QEN71_RS04710 -3.9 -17.9 trehalose-phosphatase compare
QEN71_RS17640 -3.9 -13.0 phosphoribosylanthranilate isomerase compare
QEN71_RS17645 -3.9 -7.9 tryptophan synthase subunit beta compare
QEN71_RS24595 -3.9 -15.1 transaldolase compare
QEN71_RS27560 -3.9 -13.1 anthranilate phosphoribosyltransferase compare
QEN71_RS27865 -3.9 -18.7 histidinol dehydrogenase compare
QEN71_RS27830 -3.9 -6.2 phosphoribosyl-AMP cyclohydrolase compare
QEN71_RS28040 -3.8 -10.7 shikimate kinase compare
QEN71_RS02425 -3.8 -3.7 phosphoglycerate kinase compare
QEN71_RS24970 -3.8 -9.2 argininosuccinate lyase compare
QEN71_RS02785 -3.8 -18.7 ornithine carbamoyltransferase compare
QEN71_RS24215 -3.8 -13.2 ketol-acid reductoisomerase compare
QEN71_RS21425 -3.7 -10.9 HAMP domain-containing sensor histidine kinase compare
QEN71_RS01990 -3.7 -25.7 FAD/FMN-binding oxidoreductase compare
QEN71_RS27870 -3.7 -15.9 ATP phosphoribosyltransferase compare
QEN71_RS37555 -3.7 -4.7 response regulator compare
QEN71_RS25255 -3.7 -13.9 nitrite/sulfite reductase compare
QEN71_RS03345 -3.7 -11.5 carbohydrate ABC transporter permease conserved
QEN71_RS27550 -3.7 -23.8 anthranilate synthase component I compare
QEN71_RS28010 -3.7 -26.0 glutamate synthase-related protein compare
QEN71_RS28080 -3.6 -14.8 diaminopimelate decarboxylase compare
QEN71_RS22160 -3.6 -17.6 phosphoserine phosphatase SerB compare
QEN71_RS27675 -3.6 -2.5 peptide chain release factor N(5)-glutamine methyltransferase compare
QEN71_RS26460 -3.6 -9.2 HAD family hydrolase compare
QEN71_RS06025 -3.6 -14.2 ATP phosphoribosyltransferase regulatory subunit compare
QEN71_RS06040 -3.6 -19.6 potassium transporter Kup compare
QEN71_RS21920 -3.6 -22.5 phosphoribosylformylglycinamidine synthase compare
QEN71_RS22400 -3.6 -13.2 threonine synthase compare
QEN71_RS03335 -3.5 -17.8 ABC transporter substrate-binding protein compare
QEN71_RS29475 -3.5 -16.4 YbdK family carboxylate-amine ligase compare
QEN71_RS28035 -3.5 -13.5 3-dehydroquinate synthase compare
QEN71_RS22405 -3.5 -15.4 homoserine dehydrogenase compare
QEN71_RS28005 -3.5 -6.2 glutamate synthase subunit beta compare
QEN71_RS27565 -3.5 -9.2 indole-3-glycerol phosphate synthase TrpC compare
QEN71_RS01985 -3.4 -18.8 threonine ammonia-lyase, biosynthetic compare
QEN71_RS26445 -3.4 -16.3 phosphoribosylformylglycinamidine cyclo-ligase compare
QEN71_RS01465 -3.4 -24.5 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
QEN71_RS05720 -3.4 -23.8 oxygen sensor histidine kinase FixL compare
QEN71_RS28715 -3.4 -8.1 methylenetetrahydrofolate reductase [NAD(P)H] compare
QEN71_RS27555 -3.4 -4.6 aminodeoxychorismate/anthranilate synthase component II compare
QEN71_RS17605 -3.3 -8.5 3-isopropylmalate dehydratase large subunit compare
QEN71_RS24090 -3.3 -16.7 NADH-quinone oxidoreductase subunit M compare
QEN71_RS26235 -3.3 -6.3 serine hydroxymethyltransferase compare
QEN71_RS00180 -3.3 -4.5 DUF4390 domain-containing protein compare
QEN71_RS17680 -3.3 -18.8 amidophosphoribosyltransferase compare
QEN71_RS21975 -3.3 -8.5 endopeptidase La compare
QEN71_RS02440 -3.3 -5.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
QEN71_RS03350 -3.3 -10.5 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC conserved
QEN71_RS25715 -3.2 -4.4 acetyltransferase compare
QEN71_RS24945 -3.2 -6.1 fused uroporphyrinogen-III synthase HemD/membrane protein HemX compare
QEN71_RS01460 -3.2 -12.9 protein-export chaperone SecB compare
QEN71_RS27845 -3.2 -14.8 imidazole glycerol phosphate synthase subunit HisH compare
QEN71_RS25730 -3.2 -6.1 ABC transporter permease compare
QEN71_RS27895 -3.2 -2.2 STAS domain-containing protein compare
QEN71_RS03340 -3.2 -11.1 sugar ABC transporter permease conserved
QEN71_RS24955 -3.2 -19.4 phosphoenolpyruvate carboxylase compare
QEN71_RS26600 -3.1 -6.9 pyrroline-5-carboxylate reductase compare
QEN71_RS27785 -3.1 -2.1 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
QEN71_RS21935 -3.1 -5.6 glucose-6-phosphate isomerase compare
QEN71_RS25235 -3.1 -12.1 sulfate adenylyltransferase subunit 1 compare
QEN71_RS03005 -3.1 -5.1 ATP-dependent Clp protease ATP-binding subunit ClpA compare
QEN71_RS24400 -3.1 -9.0 phosphoribosylamine--glycine ligase compare
QEN71_RS25725 -3.1 -10.8 ABC transporter ATP-binding protein compare
QEN71_RS27270 -3.0 -12.3 glutamate 5-kinase compare
QEN71_RS05215 -3.0 -13.0 chorismate synthase compare
QEN71_RS06150 -3.0 -2.1 aspartate kinase compare
QEN71_RS22205 -3.0 -22.4 class I poly(R)-hydroxyalkanoic acid synthase compare
QEN71_RS17620 -3.0 -7.1 3-isopropylmalate dehydrogenase compare
QEN71_RS04575 -2.9 -5.2 RNA polymerase sigma factor RpoE compare
QEN71_RS26780 -2.9 -3.5 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
QEN71_RS05740 -2.9 -7.1 phasin family protein compare
QEN71_RS04085 -2.9 -7.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
QEN71_RS27005 -2.9 -7.4 type I glyceraldehyde-3-phosphate dehydrogenase compare
QEN71_RS25245 -2.9 -3.4 phosphoadenylyl-sulfate reductase compare
QEN71_RS25710 -2.8 -6.0 GNAT family N-acetyltransferase compare
QEN71_RS27915 -2.8 -3.8 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
QEN71_RS17615 -2.8 -4.6 3-isopropylmalate dehydratase small subunit compare
QEN71_RS05480 -2.8 -19.2 phosphomethylpyrimidine synthase ThiC compare
QEN71_RS25630 -2.8 -4.2 NAD-dependent epimerase/dehydratase family protein compare
QEN71_RS25720 -2.8 -4.9 SAM-dependent methyltransferase compare
QEN71_RS03330 -2.7 -13.7 glucose-6-phosphate dehydrogenase compare
QEN71_RS42235 -2.7 -2.1 nitrogenase stabilizing/protective protein NifW compare
QEN71_RS25240 -2.7 -6.9 sulfate adenylyltransferase subunit CysD compare
QEN71_RS24450 -2.7 -17.2 O-antigen ligase family protein compare
QEN71_RS16440 -2.7 -3.2 presqualene diphosphate synthase HpnD compare
QEN71_RS02450 -2.7 -4.0 5-(carboxyamino)imidazole ribonucleotide synthase compare
QEN71_RS26855 -2.7 -1.8 dihydroorotase compare
QEN71_RS06455 -2.7 -8.6 RIP metalloprotease RseP compare
QEN71_RS17600 -2.6 -14.9 citrate synthase compare
QEN71_RS24220 -2.6 -4.9 acetolactate synthase small subunit compare
QEN71_RS06310 -2.6 -1.8 lysophospholipid transporter LplT compare
QEN71_RS17850 -2.6 -7.0 homoserine kinase compare
QEN71_RS01420 -2.6 -10.9 PTS sugar transporter subunit IIB compare
QEN71_RS01440 -2.6 -4.2 S41 family peptidase compare
QEN71_RS12345 -2.5 -6.2 PadR family transcriptional regulator compare
QEN71_RS24940 -2.5 -11.3 heme biosynthesis protein HemY compare
QEN71_RS08825 -2.5 -4.8 hypothetical protein compare
QEN71_RS06190 -2.4 -2.3 C40 family peptidase compare
QEN71_RS35790 -2.4 -11.0 LacI family DNA-binding transcriptional regulator compare
QEN71_RS05840 -2.4 -2.7 regulator compare
QEN71_RS20840 -2.4 -2.4 DUF1109 domain-containing protein compare
QEN71_RS27900 -2.4 -5.8 ABC transporter substrate-binding protein compare
QEN71_RS23045 -2.4 -12.6 cell division protein ZapE compare
QEN71_RS03320 -2.3 -7.6 bifunctional transcriptional regulator/glucokinase compare
QEN71_RS41430 -2.3 -17.1 GntR family transcriptional regulator compare
QEN71_RS26545 -2.3 -15.9 AsmA-like C-terminal region-containing protein compare
QEN71_RS24165 -2.3 -9.8 triose-phosphate isomerase compare
QEN71_RS16170 -2.3 -4.4 periplasmic heavy metal sensor compare
QEN71_RS24545 -2.3 -16.0 polyhydroxyalkanoate depolymerase compare
QEN71_RS25700 -2.3 -4.9 DegT/DnrJ/EryC1/StrS family aminotransferase compare
QEN71_RS21980 -2.2 -5.5 ATP-dependent Clp protease ATP-binding subunit ClpX compare
QEN71_RS25690 -2.2 -4.4 glycosyltransferase family 4 protein compare
QEN71_RS17880 -2.2 -15.7 TIGR00730 family Rossman fold protein compare
QEN71_RS25695 -2.2 -9.2 glycosyltransferase family 4 protein compare
QEN71_RS05750 -2.2 -12.4 IclR family transcriptional regulator compare
QEN71_RS03325 -2.2 -6.3 6-phosphogluconolactonase compare
QEN71_RS25250 -2.1 -6.7 DUF934 domain-containing protein compare
QEN71_RS26195 -2.1 -3.7 phage holin family protein compare
QEN71_RS01820 -2.1 -12.2 AI-2E family transporter compare
QEN71_RS09145 -2.0 -2.6 NAD(P)H-binding protein compare
QEN71_RS01240 -2.0 -2.3 acyl-ACP desaturase compare
QEN71_RS32445 -2.0 -1.6 DUF971 domain-containing protein compare
QEN71_RS27920 -2.0 -4.9 ABC transporter ATP-binding protein compare
QEN71_RS27190 -2.0 -7.2 carbohydrate kinase family protein compare
QEN71_RS25420 -1.9 -6.5 oligosaccharide flippase family protein compare
QEN71_RS15805 -1.9 -5.9 cyclic peptide export ABC transporter compare
QEN71_RS04080 -1.9 -6.3 prephenate dehydrogenase/arogenate dehydrogenase family protein compare
QEN71_RS00185 -1.9 -7.5 PAS domain-containing sensor histidine kinase compare
QEN71_RS25705 -1.9 -3.1 FdtA/QdtA family cupin domain-containing protein compare
QEN71_RS25675 -1.9 -11.5 hypothetical protein compare
QEN71_RS28105 -1.9 -2.2 c-type cytochrome compare
QEN71_RS26275 -1.9 -4.5 tol-pal system protein YbgF compare
QEN71_RS41030 -1.8 -3.9 XRE family transcriptional regulator compare
QEN71_RS10525 -1.8 -1.6 amidohydrolase family protein compare
QEN71_RS22190 -1.8 -8.2 polyhydroxyalkanoate synthesis repressor PhaR compare
QEN71_RS09470 -1.8 -2.4 hypothetical protein compare
QEN71_RS19420 -1.8 -7.0 p-hydroxycinnamoyl CoA hydratase/lyase compare
QEN71_RS23370 -1.8 -3.5 arginine/ornithine succinyltransferase subunit alpha compare
QEN71_RS01430 -1.8 -3.6 phosphoenolpyruvate--protein phosphotransferase compare
QEN71_RS24235 -1.8 -2.9 DUF3619 family protein compare
QEN71_RS27795 -1.7 -6.5 Do family serine endopeptidase compare
QEN71_RS24565 -1.7 -4.1 DUF1841 family protein compare
QEN71_RS40320 -1.7 -9.0 GntR family transcriptional regulator compare
QEN71_RS31970 -1.7 -1.1 helix-turn-helix domain-containing protein compare
QEN71_RS31390 -1.6 -4.7 FadR/GntR family transcriptional regulator compare
QEN71_RS31280 -1.6 -3.4 DUF4148 domain-containing protein compare
QEN71_RS29955 -1.6 -4.3 IclR family transcriptional regulator compare
QEN71_RS28980 -1.6 -5.7 chemotaxis response regulator CheY compare
QEN71_RS03230 -1.6 -5.2 YggT family protein compare
QEN71_RS02350 -1.6 -12.3 ADP-forming succinate--CoA ligase subunit beta compare
QEN71_RS14910 -1.6 -2.1 hypothetical protein compare
QEN71_RS24160 -1.6 -2.6 preprotein translocase subunit SecG compare
QEN71_RS24830 -1.6 -5.0 ABC transporter permease subunit compare
QEN71_RS26525 -1.5 -8.5 heat-inducible transcriptional repressor HrcA compare
QEN71_RS16775 -1.5 -7.3 chemotaxis protein CheB compare
QEN71_RS02345 -1.5 -4.8 DUF2889 domain-containing protein compare
QEN71_RS16780 -1.5 -6.6 CheR family methyltransferase compare
QEN71_RS25105 -1.5 -5.7 adenosylcobinamide-phosphate synthase CbiB compare
QEN71_RS11365 -1.5 -1.2 hypothetical protein compare
QEN71_RS02355 -1.5 -11.3 succinate--CoA ligase subunit alpha compare
QEN71_RS01715 -1.5 -6.5 tetratricopeptide repeat protein compare
QEN71_RS22195 -1.5 -5.5 3-ketoacyl-ACP reductase compare
QEN71_RS08505 -1.5 -1.8 undecaprenyl-phosphate glucose phosphotransferase compare
QEN71_RS04475 -1.5 -4.4 hypothetical protein compare
QEN71_RS01545 -1.5 -4.4 heme o synthase compare
QEN71_RS43280 -1.5 -1.8 DUF1788 domain-containing protein compare
QEN71_RS12935 -1.5 -3.0 glutamine synthetase family protein compare
QEN71_RS29005 -1.5 -5.8 chemotaxis protein CheW compare
QEN71_RS10440 -1.5 -2.6 respiratory nitrate reductase subunit gamma compare
QEN71_RS31085 -1.4 -2.4 helix-turn-helix domain-containing protein compare
QEN71_RS02150 -1.4 -3.2 lysophospholipid acyltransferase family protein compare
QEN71_RS00870 -1.4 -2.5 ATP-binding protein compare
QEN71_RS14065 -1.4 -1.3 hypothetical protein compare
QEN71_RS03220 -1.4 -7.5 tRNA (guanosine(46)-N7)-methyltransferase TrmB compare
QEN71_RS04235 -1.4 -5.9 CobD/CbiB family protein compare
QEN71_RS22015 -1.4 -7.2 squalene/phytoene synthase family protein compare
QEN71_RS02515 -1.4 -6.9 TetR family transcriptional regulator compare
QEN71_RS16915 -1.4 -1.9 cupin domain-containing protein compare
QEN71_RS27940 -1.4 -5.3 FAD-dependent oxidoreductase compare
QEN71_RS17855 -1.4 -3.7 hypothetical protein compare
QEN71_RS07475 -1.4 -1.5 hypothetical protein compare
QEN71_RS24890 -1.3 -5.6 P-II family nitrogen regulator compare
QEN71_RS36740 -1.3 -1.2 lytic transglycosylase domain-containing protein compare
QEN71_RS04240 -1.3 -1.3 DUF2007 domain-containing protein compare
QEN71_RS10925 -1.3 -1.0 helix-turn-helix domain-containing protein compare


Specific Phenotypes

For 7 genes in this experiment

For carbon source D-Glucose in Paraburkholderia sabiae LMG 24235

For carbon source D-Glucose across organisms