Experiment set1S55 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; spin-x control

200 most detrimental genes:

  gene name fitness t score description  
MPMX19_06989 +1.1 4.2 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_03195 +1.1 3.5 hypothetical protein compare
MPMX19_01479 +1.0 6.1 hypothetical protein compare
MPMX19_01067 +0.8 2.5 hypothetical protein compare
MPMX19_00852 +0.8 2.0 hypothetical protein compare
MPMX19_03439 +0.8 2.0 hypothetical protein compare
MPMX19_02531 +0.8 2.3 hypothetical protein compare
MPMX19_02811 +0.8 2.8 Long-chain-alcohol dehydrogenase 1 compare
MPMX19_01645 +0.8 1.9 HTH-type transcriptional regulator GltC compare
MPMX19_03069 +0.8 1.9 hypothetical protein compare
MPMX19_01864 +0.8 1.8 Regulatory protein AtoC compare
MPMX19_05726 +0.7 1.6 hypothetical protein compare
MPMX19_03916 +0.7 2.0 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
MPMX19_02536 +0.7 3.0 hypothetical protein compare
MPMX19_05181 +0.7 2.1 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_02816 +0.7 2.2 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_06519 +0.7 1.7 HTH-type transcriptional repressor NagR compare
MPMX19_01454 +0.7 2.2 hypothetical protein compare
MPMX19_01955 +0.7 1.8 Putative anti-sigma factor antagonist compare
MPMX19_04958 +0.7 1.7 Methyl-accepting chemotaxis protein compare
MPMX19_00044 +0.7 2.3 hypothetical protein compare
MPMX19_03756 +0.7 1.6 hypothetical protein compare
MPMX19_04271 +0.7 1.6 Response regulator rcp1 compare
MPMX19_03039 +0.6 1.4 Cyclic AMP receptor protein compare
MPMX19_05623 +0.6 3.5 Photosynthetic apparatus regulatory protein RegA compare
MPMX19_06351 +0.6 1.4 Arsenate reductase compare
MPMX19_06878 +0.6 2.9 Putative amino-acid ABC transporter-binding protein YhdW compare
MPMX19_00294 +0.6 2.1 Adaptive-response sensory-kinase SasA compare
MPMX19_03265 +0.6 4.3 Spermidine/putrescine import ATP-binding protein PotA compare
MPMX19_00212 +0.6 5.2 Nitrogen fixation regulation protein FixK compare
MPMX19_01789 +0.6 1.3 Urease subunit beta compare
MPMX19_05220 +0.6 1.2 hypothetical protein compare
MPMX19_04670 +0.6 2.6 hypothetical protein compare
MPMX19_02092 +0.6 2.0 hypothetical protein compare
MPMX19_03716 +0.6 2.8 hypothetical protein compare
MPMX19_03095 +0.6 1.6 hypothetical protein compare
MPMX19_04699 +0.6 2.7 hypothetical protein compare
MPMX19_01119 +0.6 1.9 hypothetical protein compare
MPMX19_06193 +0.6 1.6 Flagellar hook-basal body complex protein FliE compare
MPMX19_04633 +0.6 2.7 hypothetical protein compare
MPMX19_03707 +0.6 1.4 L-cystine import ATP-binding protein TcyC compare
MPMX19_05874 +0.6 1.9 2-keto-4-pentenoate hydratase compare
MPMX19_04120 +0.6 2.1 hypothetical protein compare
MPMX19_06904 +0.5 1.4 putative tautomerase compare
MPMX19_02538 +0.5 1.2 hypothetical protein compare
MPMX19_01073 +0.5 2.1 5'-nucleotidase compare
MPMX19_01401 +0.5 1.4 Ubiquinone biosynthesis accessory factor UbiK compare
MPMX19_05362 +0.5 1.7 hypothetical protein compare
MPMX19_00362 +0.5 2.1 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_03897 +0.5 2.1 hypothetical protein compare
MPMX19_00094 +0.5 1.4 hypothetical protein compare
MPMX19_00423 +0.5 2.2 (E)-2-((N-methylformamido)methylene)succinate hydrolase compare
MPMX19_05430 +0.5 1.3 HTH-type transcriptional regulator DmlR compare
MPMX19_00577 +0.5 2.7 Ribosomal RNA small subunit methyltransferase E compare
MPMX19_02094 +0.5 2.0 hypothetical protein compare
MPMX19_06979 +0.5 1.8 hypothetical protein compare
MPMX19_00074 +0.5 1.8 Electron transfer flavoprotein subunit beta compare
MPMX19_01050 +0.5 1.2 hypothetical protein compare
MPMX19_06520 +0.5 1.1 Nitrate import ATP-binding protein NrtC compare
MPMX19_04469 +0.5 2.5 hypothetical protein compare
MPMX19_00887 +0.5 1.4 hypothetical protein compare
MPMX19_05906 +0.5 1.0 hypothetical protein compare
MPMX19_02772 +0.5 1.5 N-acetylcysteine deacetylase compare
MPMX19_01012 +0.5 1.9 Cyclic pyranopterin monophosphate synthase compare
MPMX19_05193 +0.5 1.2 Taurine-binding periplasmic protein compare
MPMX19_06765 +0.5 1.3 Hydrogen peroxide-inducible genes activator compare
MPMX19_03609 +0.5 1.4 HTH-type transcriptional repressor NagR compare
MPMX19_06791 +0.5 2.3 Leucine-responsive regulatory protein compare
MPMX19_04393 +0.5 1.6 hypothetical protein compare
MPMX19_03109 +0.5 1.6 hypothetical protein compare
MPMX19_06171 +0.5 2.6 hypothetical protein compare
MPMX19_03448 +0.5 1.9 hypothetical protein compare
MPMX19_06773 +0.5 1.8 2-(R)-hydroxypropyl-CoM dehydrogenase compare
MPMX19_05738 +0.5 2.7 hypothetical protein compare
MPMX19_02765 +0.5 2.2 hypothetical protein compare
MPMX19_02466 +0.4 1.1 Octopine permease ATP-binding protein P compare
MPMX19_06579 +0.4 1.3 Carnitine monooxygenase oxygenase subunit compare
MPMX19_03262 +0.4 1.6 putative HTH-type transcriptional repressor ExuR compare
MPMX19_04560 +0.4 1.4 hypothetical protein compare
MPMX19_06467 +0.4 1.9 hypothetical protein compare
MPMX19_02511 +0.4 1.0 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase compare
MPMX19_06385 +0.4 1.4 hypothetical protein compare
MPMX19_05011 +0.4 2.0 tRNA (cytidine(34)-2'-O)-methyltransferase compare
MPMX19_00544 +0.4 1.2 hypothetical protein compare
MPMX19_03667 +0.4 1.5 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_02366 +0.4 2.4 hypothetical protein compare
MPMX19_01367 +0.4 1.3 Protein YhfA compare
MPMX19_04145 +0.4 1.2 hypothetical protein compare
MPMX19_06513 +0.4 2.7 putative N-succinyldiaminopimelate aminotransferase DapC compare
MPMX19_01235 +0.4 1.4 hypothetical protein compare
MPMX19_01702 +0.4 1.5 Inorganic triphosphatase compare
MPMX19_03445 +0.4 2.7 hypothetical protein compare
MPMX19_05762 +0.4 1.6 hypothetical protein compare
MPMX19_05690 +0.4 3.0 Protein phosphotransferase ChpT compare
MPMX19_01493 +0.4 0.9 Flagellar assembly protein FliX compare
MPMX19_06843 +0.4 1.4 hypothetical protein compare
MPMX19_06815 +0.4 1.6 hypothetical protein compare
MPMX19_02865 +0.4 1.8 hypothetical protein compare
MPMX19_04043 +0.4 1.3 Aldehyde-alcohol dehydrogenase compare
MPMX19_05622 +0.4 3.1 Sensor histidine kinase RegB compare
MPMX19_03934 +0.4 1.4 hypothetical protein compare
MPMX19_04743 +0.4 1.4 Formyltransferase/hydrolase complex subunit D compare
MPMX19_03320 +0.4 1.5 hypothetical protein compare
MPMX19_06197 +0.4 0.7 hypothetical protein compare
MPMX19_02502 +0.4 2.0 hypothetical protein compare
MPMX19_04783 +0.4 2.6 Ubiquinone biosynthesis O-methyltransferase, mitochondrial compare
MPMX19_03419 +0.4 2.8 hypothetical protein compare
MPMX19_03543 +0.4 1.5 putative ABC transporter ATP-binding protein YejF compare
MPMX19_06526 +0.4 1.6 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_06395 +0.4 1.7 Inner membrane protein YqaA compare
MPMX19_01376 +0.4 1.2 hypothetical protein compare
MPMX19_03292 +0.4 1.0 hypothetical protein compare
MPMX19_05896 +0.4 1.3 hypothetical protein compare
MPMX19_03462 +0.4 1.7 Acetate CoA-transferase subunit alpha compare
MPMX19_03655 +0.4 0.7 hypothetical protein compare
MPMX19_03757 +0.4 1.1 D-ribose pyranase compare
MPMX19_00611 +0.4 1.8 (3S)-malyl-CoA thioesterase compare
MPMX19_02706 +0.4 1.5 hypothetical protein compare
MPMX19_04392 +0.4 1.2 Bifunctional methionine biosynthesis protein MetXA/MetW compare
MPMX19_04684 +0.4 2.1 HTH-type transcriptional repressor RspR compare
MPMX19_06896 +0.4 1.5 L-aspartate oxidase compare
MPMX19_02918 +0.4 1.5 NAD(P)-dependent methylenetetrahydromethanopterin dehydrogenase compare
MPMX19_00320 +0.4 1.0 hypothetical protein compare
MPMX19_05725 +0.4 1.0 hypothetical protein compare
MPMX19_00204 +0.4 1.6 hypothetical protein compare
MPMX19_04262 +0.4 2.1 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_04990 +0.4 1.0 Hydrogen peroxide-inducible genes activator compare
MPMX19_05686 +0.4 1.5 Chemotaxis protein CheY compare
MPMX19_03579 +0.4 2.2 Sensor histidine kinase RcsC compare
MPMX19_05324 +0.4 2.5 hypothetical protein compare
MPMX19_06646 +0.4 1.7 hypothetical protein compare
MPMX19_04648 +0.4 1.6 hypothetical protein compare
MPMX19_01349 +0.4 2.5 hypothetical protein compare
MPMX19_06770 +0.4 1.8 NAD-dependent glycerol dehydrogenase compare
MPMX19_00966 +0.4 2.0 ATP-dependent zinc metalloprotease FtsH compare
MPMX19_02860 +0.4 1.3 hypothetical protein compare
MPMX19_03637 +0.4 2.1 Nopaline-binding periplasmic protein compare
MPMX19_05454 +0.4 1.0 hypothetical protein compare
MPMX19_01445 +0.4 1.3 hypothetical protein compare
MPMX19_02733 +0.4 2.2 Regulatory protein LuxO compare
MPMX19_02796 +0.4 1.7 Methanogen homoaconitase small subunit compare
MPMX19_02021 +0.4 2.0 Anti-sigma-E factor ChrR compare
MPMX19_05019 +0.4 2.2 Propionyl-CoA carboxylase beta chain compare
MPMX19_01141 +0.4 1.8 hypothetical protein compare
MPMX19_04082 +0.4 2.1 hypothetical protein compare
MPMX19_04484 +0.4 1.6 2-iminobutanoate/2-iminopropanoate deaminase compare
MPMX19_00152 +0.4 0.7 hypothetical protein compare
MPMX19_04759 +0.4 1.3 HTH-type transcriptional regulator LutR compare
MPMX19_06696 +0.4 1.0 hypothetical protein compare
MPMX19_05022 +0.4 1.8 hypothetical protein compare
MPMX19_01834 +0.4 0.5 hypothetical protein compare
MPMX19_01060 +0.4 2.4 Ferrous iron permease EfeU compare
MPMX19_02430 +0.4 2.1 hypothetical protein compare
MPMX19_06355 +0.4 1.8 hypothetical protein compare
MPMX19_00766 +0.4 1.3 hypothetical protein compare
MPMX19_05195 +0.4 1.4 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_02202 +0.4 0.9 hypothetical protein compare
MPMX19_03822 +0.4 0.7 Sulfur carrier protein FdhD compare
MPMX19_06269 +0.4 1.9 IS110 family transposase ISHne4 compare
MPMX19_05205 +0.4 1.1 hypothetical protein compare
MPMX19_00244 +0.4 1.8 hypothetical protein compare
MPMX19_04677 +0.4 1.4 Sulfate/thiosulfate import ATP-binding protein CysA compare
MPMX19_06506 +0.4 1.3 hypothetical protein compare
MPMX19_03163 +0.4 2.0 hypothetical protein compare
MPMX19_06498 +0.3 1.1 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_02664 +0.3 0.7 Arabinose 5-phosphate isomerase KdsD compare
MPMX19_06099 +0.3 2.8 hypothetical protein compare
MPMX19_02608 +0.3 1.6 hypothetical protein compare
MPMX19_06207 +0.3 0.9 hypothetical protein compare
MPMX19_01079 +0.3 1.5 hypothetical protein compare
MPMX19_04771 +0.3 2.2 Sialic acid TRAP transporter permease protein SiaT compare
MPMX19_00008 +0.3 1.0 hypothetical protein compare
MPMX19_06569 +0.3 1.0 hypothetical protein compare
MPMX19_03249 +0.3 2.6 Carnitine monooxygenase oxygenase subunit compare
MPMX19_04408 +0.3 1.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase compare
MPMX19_05459 +0.3 0.8 hypothetical protein compare
MPMX19_03676 +0.3 1.1 hypothetical protein compare
MPMX19_03450 +0.3 0.8 hypothetical protein compare
MPMX19_04919 +0.3 2.0 5-aminovalerate aminotransferase DavT compare
MPMX19_01757 +0.3 1.7 Ferredoxin--NADP reductase compare
MPMX19_02875 +0.3 0.9 hypothetical protein compare
MPMX19_06699 +0.3 2.0 Nickel/cobalt efflux system RcnA compare
MPMX19_06713 +0.3 1.6 hypothetical protein compare
MPMX19_00717 +0.3 1.6 hypothetical protein compare
MPMX19_04768 +0.3 1.9 Apulose-4-phosphate transketolase subunit A compare
MPMX19_05548 +0.3 1.5 D-methionine transport system permease protein MetI compare
MPMX19_05685 +0.3 2.3 Protein-glutamate methylesterase/protein-glutamine glutaminase 2 compare
MPMX19_00334 +0.3 0.7 hypothetical protein compare
MPMX19_04826 +0.3 1.3 hypothetical protein compare
MPMX19_03527 +0.3 1.5 hypothetical protein compare
MPMX19_02880 +0.3 1.4 hypothetical protein compare
MPMX19_06470 +0.3 1.3 4-hydroxy-3-prenylphenylpyruvate oxygenase/4-hydroxy-3-prenylbenzoate synthase compare
MPMX19_03787 +0.3 0.6 hypothetical protein compare
MPMX19_04786 +0.3 2.2 Thymidylate kinase compare
MPMX19_02871 +0.3 1.3 HTH-type transcriptional activator RhaR compare
MPMX19_03112 +0.3 1.9 Ribonuclease BN compare
MPMX19_04793 +0.3 1.9 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_04025 +0.3 1.5 hypothetical protein compare
MPMX19_04231 +0.3 1.9 hypothetical protein compare
MPMX19_03287 +0.3 1.5 6-aminohexanoate-cyclic-dimer hydrolase compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm; spin-x control experiments