Experiment set1S532 for Alteromonas macleodii MIT1002

Compare to:

Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3

200 most important genes:

  gene name fitness t score description  
MIT1002_03690 -8.2 -5.7 DnaK suppressor protein compare
MIT1002_02524 -7.9 -5.5 Amidophosphoribosyltransferase compare
MIT1002_00471 -7.9 -10.9 N-acetyl-gamma-glutamyl-phosphate reductase compare
MIT1002_00504 -7.9 -6.8 Acetolactate synthase isozyme 3 small subunit compare
MIT1002_02636 -7.9 -5.4 Imidazole glycerol phosphate synthase subunit HisH compare
MIT1002_01263 -7.8 -4.7 7-cyano-7-deazaguanine synthase compare
MIT1002_01027 -7.8 -13.0 Phosphoribosylformylglycinamidine synthase compare
MIT1002_00949 -7.8 -7.6 2-isopropylmalate synthase compare
MIT1002_01763 -7.7 -3.0 Putative pterin-4-alpha-carbinolamine dehydratase compare
MIT1002_00469 -7.7 -5.3 Ornithine carbamoyltransferase compare
MIT1002_04045 -7.6 -7.4 Ketol-acid reductoisomerase compare
MIT1002_01112 -7.6 -5.3 Homoserine O-succinyltransferase compare
MIT1002_03179 -7.6 -5.3 Cystathionine beta-lyase PatB compare
MIT1002_02220 -7.6 -5.3 Phosphoribosylglycinamide formyltransferase compare
MIT1002_00948 -7.6 -11.6 3-isopropylmalate dehydrogenase compare
MIT1002_02833 -7.6 -13.6 Malate synthase G compare
MIT1002_00522 -7.5 -5.2 N5-carboxyaminoimidazole ribonucleotide synthase compare
MIT1002_01035 -7.4 -4.7 anti-sigma28 factor FlgM compare
MIT1002_03139 -7.4 -14.3 Glutamate synthase [NADPH] large chain precursor compare
MIT1002_00467 -7.3 -5.1 Argininosuccinate lyase compare
MIT1002_00947 -7.3 -5.1 3-isopropylmalate dehydratase large subunit compare
MIT1002_01266 -7.3 -5.0 Asparagine synthetase B [glutamine-hydrolyzing] compare
MIT1002_03961 -7.3 -8.6 Phosphoribosylamine--glycine ligase compare
MIT1002_02266 -7.3 -5.0 Methionine gamma-lyase compare
MIT1002_02993 -7.2 -5.0 D-3-phosphoglycerate dehydrogenase compare
MIT1002_02831 -7.2 -11.0 Isocitrate lyase compare
MIT1002_02634 -7.2 -5.0 Histidinol-phosphate aminotransferase compare
MIT1002_03086 -7.2 -9.9 Aspartokinase I/homoserine dehydrogenase I compare
MIT1002_00485 -7.2 -5.0 Glycerol-3-phosphate dehydrogenase [NAD(P)+] compare
MIT1002_02635 -7.1 -4.9 Histidine biosynthesis bifunctional protein HisB compare
MIT1002_03140 -7.1 -4.9 Glutamate synthase [NADPH] small chain compare
MIT1002_00466 -7.1 -8.4 Amino-acid acetyltransferase compare
MIT1002_03516 -7.1 -11.8 Acetyl-coenzyme A synthetase compare
MIT1002_00468 -7.0 -6.9 Argininosuccinate synthase compare
MIT1002_00377 -7.0 -10.7 Branched-chain-amino-acid aminotransferase 2 compare
MIT1002_02639 -7.0 -8.4 Phosphoribosyl-ATP pyrophosphatase compare
MIT1002_02708 -7.0 -4.8 Phosphoserine phosphatase compare
MIT1002_02633 -7.0 -8.3 Histidinol dehydrogenase compare
MIT1002_01466 -7.0 -4.8 Carbamoyl-phosphate synthase small chain compare
MIT1002_04041 -6.9 -6.8 Dihydroxy-acid dehydratase compare
MIT1002_02219 -6.9 -11.6 Phosphoribosylformylglycinamidine cyclo-ligase compare
MIT1002_00424 -6.9 -8.2 Solvent efflux pump srpABC operon corepressor compare
MIT1002_01467 -6.9 -4.8 Carbamoyl-phosphate synthase large chain compare
MIT1002_03084 -6.9 -4.8 Threonine synthase compare
MIT1002_02638 -6.9 -8.2 Imidazole glycerol phosphate synthase subunit HisF compare
MIT1002_04040 -6.8 -15.2 L-threonine dehydratase biosynthetic IlvA compare
MIT1002_00160 -6.8 -4.7 Diaminopimelate decarboxylase compare
MIT1002_02429 -6.8 -16.0 Glucose-resistance amylase regulator compare
MIT1002_01885 -6.8 -4.7 Gamma-glutamyl phosphate reductase compare
MIT1002_03096 -6.8 -8.1 Isocitrate dehydrogenase kinase/phosphatase compare
MIT1002_03130 -6.8 -4.7 2-methylcitrate synthase compare
MIT1002_01984 -6.7 -4.7 queuosine biosynthesis protein QueD compare
MIT1002_02637 -6.7 -4.7 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MIT1002_03062 -6.7 -4.6 Pyrroline-5-carboxylate reductase compare
MIT1002_01429 -6.6 -4.6 Anthranilate synthase component II compare
MIT1002_01264 -6.6 -4.6 7-carboxy-7-deazaguanine synthase compare
MIT1002_01428 -6.6 -4.6 Anthranilate synthase component II compare
MIT1002_00946 -6.6 -11.8 3-isopropylmalate dehydratase small subunit 1 compare
MIT1002_00437 -6.6 -4.6 Succinylornithine transaminase/acetylornithine aminotransferase compare
MIT1002_03085 -6.5 -4.5 Homoserine kinase compare
MIT1002_00503 -6.4 -9.9 Acetolactate synthase isozyme 3 large subunit compare
MIT1002_02702 -6.4 -16.1 Serine hydroxymethyltransferase compare
MIT1002_01979 -6.4 -9.8 Carnitinyl-CoA dehydratase compare
MIT1002_04056 -6.4 -8.8 Glutamate 5-kinase compare
MIT1002_02832 -6.4 -4.4 Nodulation protein D 2 compare
MIT1002_00988 -6.4 -4.4 NADPH-dependent 7-cyano-7-deazaguanine reductase compare
MIT1002_02394 -6.4 -8.7 Glyceraldehyde-3-phosphate dehydrogenase compare
MIT1002_00826 -6.2 -3.6 Ribosome hibernation promoting factor compare
MIT1002_01430 -6.1 -4.2 Anthranilate synthase component 1 compare
MIT1002_03885 -6.1 -9.3 NADH dehydrogenase compare
MIT1002_00843 -6.1 -7.2 hypothetical protein compare
MIT1002_01129 -6.0 -3.0 Carbon storage regulator compare
MIT1002_02632 -6.0 -4.1 ATP phosphoribosyltransferase compare
MIT1002_00138 -6.0 -12.7 Histone deacetylase-like amidohydrolase compare
MIT1002_00076 -5.9 -3.2 transcriptional regulator, y4mF family compare
MIT1002_02991 -5.8 -4.0 putative 5-formyltetrahydrofolate cyclo-ligase compare
MIT1002_04044 -5.8 -19.2 HTH-type transcriptional regulator GltC compare
MIT1002_01295 -5.8 -5.6 Inner membrane protein YpjD compare
MIT1002_00423 -5.7 -3.9 Aspartate carbamoyltransferase catalytic chain compare
MIT1002_02760 -5.6 -3.9 ATP-dependent Clp protease proteolytic subunit precursor compare
MIT1002_00521 -5.6 -3.7 N5-carboxyaminoimidazole ribonucleotide mutase compare
MIT1002_00189 -5.6 -22.2 Galactokinase compare
MIT1002_01427 -5.5 -3.1 Tryptophan biosynthesis protein TrpCF compare
MIT1002_04092 -5.5 -3.8 putative type I restriction enzymeP M protein compare
MIT1002_02404 -5.5 -9.9 Glucokinase compare
MIT1002_01316 -5.4 -10.9 P-protein compare
MIT1002_02184 -5.4 -2.4 Orotidine 5'-phosphate decarboxylase compare
MIT1002_00188 -5.4 -11.6 Galactose-1-phosphate uridylyltransferase compare
MIT1002_03015 -5.4 -9.8 aspartoacylase compare
MIT1002_02811 -5.3 -24.6 preprotein translocase subunit SecD compare
MIT1002_02035 -5.3 -2.1 Dihydroorotate dehydrogenase (quinone) compare
MIT1002_00470 -5.3 -7.6 Acetylglutamate kinase compare
MIT1002_01736 -5.3 -18.4 Aminodeoxychorismate lyase compare
MIT1002_01544 -5.1 -13.3 D-alanyl-D-alanine carboxypeptidase compare
MIT1002_00074 -5.1 -2.8 tRNA-Arg compare
MIT1002_03488 -5.0 -3.5 Na(+)-translocating NADH-quinone reductase subunit A compare
MIT1002_01345 -5.0 -2.3 tRNA-Ser compare
MIT1002_00884 -5.0 -2.5 hypothetical protein compare
MIT1002_02188 -4.8 -3.3 Integration host factor subunit beta compare
MIT1002_00486 -4.8 -1.1 Protein-export protein SecB compare
MIT1002_01638 -4.8 -3.3 Integration host factor subunit alpha compare
MIT1002_03323 -4.7 -15.4 Sensor histidine kinase LiaS compare
MIT1002_02972 -4.7 -6.2 Glycine cleavage system H protein compare
MIT1002_02971 -4.7 -21.0 Glycine dehydrogenase [decarboxylating] compare
MIT1002_03978 -4.6 -3.2 General secretion pathway protein F compare
MIT1002_04134 -4.6 -20.3 Sporulation initiation inhibitor protein soj compare
MIT1002_03484 -4.6 -2.1 Na(+)-translocating NADH-quinone reductase subunit E compare
MIT1002_04036 -4.5 -3.8 LexA repressor compare
MIT1002_03321 -4.5 -14.4 Aldehyde dehydrogenase B compare
MIT1002_03979 -4.5 -1.8 Pullulanase secretion protein PulG compare
MIT1002_00815 -4.5 -3.1 Cytochrome b/c1 compare
MIT1002_02807 -4.5 -4.3 Inositol-1-monophosphatase compare
MIT1002_03977 -4.5 -3.1 Type II traffic warden ATPase compare
MIT1002_00115 -4.4 -2.0 Iron(III)-binding periplasmic protein compare
MIT1002_02973 -4.4 -14.7 Aminomethyltransferase compare
MIT1002_00816 -4.4 -3.0 Cytochrome c1 precursor compare
MIT1002_03805 -4.3 -2.4 hypothetical protein compare
MIT1002_03485 -4.3 -2.4 Na(+)-translocating NADH-quinone reductase subunit D compare
MIT1002_03980 -4.3 -3.0 General secretion pathway protein H compare
MIT1002_02810 -4.3 -9.7 preprotein translocase subunit SecF compare
MIT1002_03982 -4.3 -2.5 PilD-dependent protein PddD compare
MIT1002_03331 -4.2 -8.8 D-lactate dehydrogenase compare
MIT1002_01163 -4.2 -2.3 hypothetical protein compare
MIT1002_03487 -4.2 -2.9 Na(+)-translocating NADH-quinone reductase subunit B compare
MIT1002_00235 -4.2 -3.0 Glycogen synthase compare
MIT1002_02406 -4.2 -2.7 6-phosphogluconolactonase compare
MIT1002_03055 -4.2 -4.9 Glutathione synthetase compare
MIT1002_01457 -4.1 -1.3 Heat shock protein 70 compare
MIT1002_02757 -4.1 -14.4 Lon protease compare
MIT1002_03981 -4.1 -1.8 Putative general secretion pathway protein I compare
MIT1002_00872 -4.1 -14.1 Polyphosphate kinase compare
MIT1002_00351 -4.1 -15.2 Degradation activator compare
MIT1002_00117 -4.0 -2.3 Maltose/maltodextrin import ATP-binding protein MalK compare
MIT1002_03486 -4.0 -2.8 Na(+)-translocating NADH-quinone reductase subunit C compare
MIT1002_03976 -4.0 -2.8 Pullulanase secretion envelope PulD compare
MIT1002_03909 -4.0 -11.8 NAD(P) transhydrogenase subunit alpha part 1 compare
MIT1002_03786 -4.0 -13.9 Modulator of FtsH protease HflK compare
MIT1002_03907 -4.0 -12.4 NAD(P) transhydrogenase subunit beta compare
MIT1002_04135 -4.0 -15.8 ParB/RepB/Spo0J family partition protein compare
MIT1002_00233 -4.0 -3.8 Dye resistance protein compare
MIT1002_01777 -3.9 -5.3 chromosome segregation protein SMC compare
MIT1002_03908 -3.9 -8.7 NAD(P) transhydrogenase subunit alpha compare
MIT1002_03110 -3.9 -7.0 Carboxynorspermidine/carboxyspermidine decarboxylase compare
MIT1002_02349 -3.9 -12.6 2-hydroxypropyl-CoM lyase compare
MIT1002_03983 -3.9 -2.7 Putative general secretion pathway protein K compare
MIT1002_03481 -3.9 -3.1 hypothetical protein compare
MIT1002_03785 -3.9 -11.3 Modulator of FtsH protease HflC compare
MIT1002_02348 -3.8 -12.1 hypothetical protein compare
MIT1002_02400 -3.8 -14.1 4-alpha-glucanotransferase compare
MIT1002_00161 -3.8 -3.7 putative small periplasmic lipoprotein compare
MIT1002_04093 -3.8 -1.2 Type I restriction modification DNA specificity domain protein compare
MIT1002_04050 -3.8 -1.2 hypothetical protein compare
MIT1002_02815 -3.8 -3.3 hypothetical protein compare
MIT1002_02306 -3.8 -5.7 Glutamate-pyruvate aminotransferase AlaA compare
MIT1002_01168 -3.8 -1.9 Flp pilus assembly protein TadD, contains TPR repeats compare
MIT1002_03137 -3.8 -8.3 Aerobic respiration control sensor protein ArcB compare
MIT1002_02581 -3.7 -3.7 Disulfide oxidoreductase compare
MIT1002_00068 -3.7 -8.5 Chorismate--pyruvate lyase compare
MIT1002_01925 -3.6 -1.9 hypothetical protein compare
MIT1002_01435 -3.6 -1.8 Ribosomal large subunit pseudouridine synthase B compare
MIT1002_01222 -3.6 -2.0 Glutamate--cysteine ligase compare
MIT1002_00970 -3.6 -8.7 UDP-glucose 4-epimerase compare
MIT1002_02012 -3.5 -12.9 Pyruvate dehydrogenase E1 component subunit alpha compare
MIT1002_00809 -3.5 -11.8 Sensor protein QseC compare
MIT1002_01001 -3.4 -7.7 PII uridylyl-transferase compare
MIT1002_02129 -3.4 -6.8 hypothetical protein compare
MIT1002_03984 -3.4 -2.4 General secretion pathway protein L compare
MIT1002_03698 -3.4 -5.3 tRNA (guanine-N(7)-)-methyltransferase compare
MIT1002_00814 -3.4 -4.7 Ubiquinol-cytochrome c reductase iron-sulfur subunit compare
MIT1002_02812 -3.4 -3.0 preprotein translocase subunit YajC compare
MIT1002_04233 -3.4 -2.7 hypothetical protein compare
MIT1002_00116 -3.3 -1.8 Spermidine/putrescine transport system permease protein PotB compare
MIT1002_02014 -3.3 -12.5 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex compare
MIT1002_02154 -3.2 -2.9 Response regulator UvrY compare
MIT1002_01119 -3.2 -11.1 HTH-type transcriptional regulator GltC compare
MIT1002_04124 -3.2 -2.2 Glucose-inhibited division protein A compare
MIT1002_02405 -3.2 -6.9 Phosphogluconate dehydratase compare
MIT1002_00100 -3.1 -10.7 Putative uroporphyrinogen-III C-methyltransferase compare
MIT1002_03186 -3.1 -10.2 Nitrogen regulation protein NR(I) compare
MIT1002_02573 -3.1 -7.1 hypothetical protein compare
MIT1002_02681 -3.1 -8.1 Transcriptional activator ChrR compare
MIT1002_02013 -3.1 -10.1 2-oxoisovalerate dehydrogenase subunit beta compare
MIT1002_01832 -3.0 -2.6 Cold shock-like protein CspD compare
MIT1002_00877 -3.0 -6.6 Repressor protein PhoU compare
MIT1002_00827 -3.0 -3.2 RNA polymerase sigma-54 factor 2 compare
MIT1002_03109 -2.9 -4.1 Saccharopine dehydrogenase compare
MIT1002_03003 -2.9 -6.6 Pyruvate dehydrogenase E1 component compare
MIT1002_01917 -2.9 -3.9 hypothetical protein compare
MIT1002_00670 -2.9 -1.8 Outer membrane protein TolC precursor compare
MIT1002_01981 -2.9 -10.2 Inner membrane protein YejM compare
MIT1002_03539 -2.9 -1.5 Bifunctional protein BirA compare
MIT1002_00844 -2.8 -7.1 AFG1-like ATPase compare
MIT1002_00066 -2.8 -7.6 Rhomboid protease GlpG compare
MIT1002_00114 -2.7 -2.1 hypothetical protein compare
MIT1002_00454 -2.7 -4.1 Penicillin-binding protein 1A compare
MIT1002_04120 -2.7 -1.5 F0F1 ATP synthase subunit I compare
MIT1002_02008 -2.7 -9.7 Para-aminobenzoate synthase component 1 compare
MIT1002_03658 -2.6 -5.4 putative zinc finger/helix-turn-helix protein, YgiT family compare
MIT1002_00436 -2.6 -3.9 Arginine N-succinyltransferase subunit beta compare
MIT1002_01515 -2.6 -5.5 Release factor glutamine methyltransferase compare


Specific Phenotypes

None in this experiment

For Alteromonas macleodii MIT1002 in mixed community experiments

For mixed community Mixed culture; Prochlorococcus marinus str. MIT9313 10:1 starting OD to HP15 across organisms