Experiment set1S525 for Alteromonas macleodii MIT1002

Compare to:

Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7

200 most important genes:

  gene name fitness t score description  
MIT1002_01422 -5.9 -5.2 hypothetical protein compare
MIT1002_03785 -5.2 -3.6 Modulator of FtsH protease HflC compare
MIT1002_00113 -5.0 -3.5 Putative peroxiredoxin compare
MIT1002_03690 -4.9 -3.4 DnaK suppressor protein compare
MIT1002_03908 -4.8 -4.7 NAD(P) transhydrogenase subunit alpha compare
MIT1002_00351 -4.8 -5.7 Degradation activator compare
MIT1002_03786 -4.8 -3.3 Modulator of FtsH protease HflK compare
MIT1002_00471 -4.7 -3.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
MIT1002_00504 -4.7 -3.2 Acetolactate synthase isozyme 3 small subunit compare
MIT1002_02348 -4.6 -5.5 hypothetical protein compare
MIT1002_02429 -4.5 -3.1 Glucose-resistance amylase regulator compare
MIT1002_04045 -4.5 -3.1 Ketol-acid reductoisomerase compare
MIT1002_01027 -4.5 -3.1 Phosphoribosylformylglycinamidine synthase compare
MIT1002_02524 -4.5 -3.1 Amidophosphoribosyltransferase compare
MIT1002_00948 -4.5 -3.1 3-isopropylmalate dehydrogenase compare
MIT1002_00189 -4.4 -3.1 Galactokinase compare
MIT1002_02833 -4.4 -3.1 Malate synthase G compare
MIT1002_01827 -4.4 -3.1 High frequency lysogenization protein HflD compare
MIT1002_00469 -4.4 -3.0 Ornithine carbamoyltransferase compare
MIT1002_03909 -4.4 -6.0 NAD(P) transhydrogenase subunit alpha part 1 compare
MIT1002_01263 -4.4 -3.0 7-cyano-7-deazaguanine synthase compare
MIT1002_03516 -4.4 -3.0 Acetyl-coenzyme A synthetase compare
MIT1002_03034 -4.4 -6.7 cell division protein MraZ compare
MIT1002_00949 -4.3 -3.0 2-isopropylmalate synthase compare
MIT1002_01763 -4.3 -2.2 Putative pterin-4-alpha-carbinolamine dehydratase compare
MIT1002_02636 -4.3 -3.0 Imidazole glycerol phosphate synthase subunit HisH compare
MIT1002_03139 -4.3 -3.0 Glutamate synthase [NADPH] large chain precursor compare
MIT1002_03907 -4.3 -2.9 NAD(P) transhydrogenase subunit beta compare
MIT1002_00826 -4.2 -2.6 Ribosome hibernation promoting factor compare
MIT1002_00946 -4.2 -2.9 3-isopropylmalate dehydratase small subunit 1 compare
MIT1002_00377 -4.2 -2.9 Branched-chain-amino-acid aminotransferase 2 compare
MIT1002_00933 -4.2 -2.9 Inner membrane protein YohK compare
MIT1002_03179 -4.2 -2.9 Cystathionine beta-lyase PatB compare
MIT1002_01112 -4.2 -2.9 Homoserine O-succinyltransferase compare
MIT1002_04040 -4.2 -2.9 L-threonine dehydratase biosynthetic IlvA compare
MIT1002_00522 -4.2 -2.9 N5-carboxyaminoimidazole ribonucleotide synthase compare
MIT1002_03961 -4.2 -2.9 Phosphoribosylamine--glycine ligase compare
MIT1002_02220 -4.1 -2.9 Phosphoribosylglycinamide formyltransferase compare
MIT1002_01122 -4.1 -2.9 Bicarbonate transporter BicA compare
MIT1002_02219 -4.1 -2.8 Phosphoribosylformylglycinamidine cyclo-ligase compare
MIT1002_02831 -4.1 -2.8 Isocitrate lyase compare
MIT1002_03300 -4.1 -8.7 HTH-type transcriptional regulator UlaR compare
MIT1002_00467 -4.0 -2.8 Argininosuccinate lyase compare
MIT1002_03086 -4.0 -2.8 Aspartokinase I/homoserine dehydrogenase I compare
MIT1002_01119 -4.0 -2.8 HTH-type transcriptional regulator GltC compare
MIT1002_03015 -4.0 -2.8 aspartoacylase compare
MIT1002_01035 -4.0 -2.8 anti-sigma28 factor FlgM compare
MIT1002_02287 -4.0 -2.7 Electron transfer flavoprotein small subunit compare
MIT1002_01362 -3.9 -9.5 Virulence-associated outer membrane protein Vir-90 compare
MIT1002_04044 -3.9 -2.7 HTH-type transcriptional regulator GltC compare
MIT1002_01266 -3.9 -2.7 Asparagine synthetase B [glutamine-hydrolyzing] compare
MIT1002_02349 -3.9 -4.6 2-hydroxypropyl-CoM lyase compare
MIT1002_00188 -3.9 -2.7 Galactose-1-phosphate uridylyltransferase compare
MIT1002_00068 -3.9 -2.7 Chorismate--pyruvate lyase compare
MIT1002_00947 -3.9 -2.7 3-isopropylmalate dehydratase large subunit compare
MIT1002_02993 -3.9 -2.7 D-3-phosphoglycerate dehydrogenase compare
MIT1002_00466 -3.9 -2.7 Amino-acid acetyltransferase compare
MIT1002_02639 -3.8 -2.7 Phosphoribosyl-ATP pyrophosphatase compare
MIT1002_02638 -3.8 -2.7 Imidazole glycerol phosphate synthase subunit HisF compare
MIT1002_02008 -3.8 -5.9 Para-aminobenzoate synthase component 1 compare
MIT1002_00485 -3.8 -2.6 Glycerol-3-phosphate dehydrogenase [NAD(P)+] compare
MIT1002_02154 -3.8 -1.9 Response regulator UvrY compare
MIT1002_02266 -3.8 -2.6 Methionine gamma-lyase compare
MIT1002_00809 -3.8 -2.6 Sensor protein QseC compare
MIT1002_01840 -3.8 -5.2 Protease 4 compare
MIT1002_03539 -3.8 -2.0 Bifunctional protein BirA compare
MIT1002_03698 -3.8 -2.6 tRNA (guanine-N(7)-)-methyltransferase compare
MIT1002_03321 -3.8 -2.6 Aldehyde dehydrogenase B compare
MIT1002_02811 -3.7 -2.6 preprotein translocase subunit SecD compare
MIT1002_04041 -3.7 -2.6 Dihydroxy-acid dehydratase compare
MIT1002_03140 -3.7 -2.6 Glutamate synthase [NADPH] small chain compare
MIT1002_02634 -3.7 -2.6 Histidinol-phosphate aminotransferase compare
MIT1002_00468 -3.7 -4.4 Argininosuccinate synthase compare
MIT1002_02702 -3.6 -2.5 Serine hydroxymethyltransferase compare
MIT1002_02633 -3.6 -2.5 Histidinol dehydrogenase compare
MIT1002_02810 -3.6 -2.5 preprotein translocase subunit SecF compare
MIT1002_03885 -3.6 -2.5 NADH dehydrogenase compare
MIT1002_02635 -3.6 -2.5 Histidine biosynthesis bifunctional protein HisB compare
MIT1002_01265 -3.6 -5.5 hypothetical protein compare
MIT1002_03828 -3.6 -5.0 Taurine catabolism dioxygenase TauD, TfdA family compare
MIT1002_03096 -3.6 -2.5 Isocitrate dehydrogenase kinase/phosphatase compare
MIT1002_01816 -3.6 -16.8 Phosphoenolpyruvate synthase compare
MIT1002_02231 -3.6 -2.5 Phosphoglycolate phosphatase compare
MIT1002_00823 -3.6 -2.5 Phosphocarrier protein NPr compare
MIT1002_00470 -3.6 -8.5 Acetylglutamate kinase compare
MIT1002_01420 -3.6 -2.5 Virulence sensor histidine kinase PhoQ compare
MIT1002_00503 -3.5 -2.4 Acetolactate synthase isozyme 3 large subunit compare
MIT1002_01466 -3.5 -2.4 Carbamoyl-phosphate synthase small chain compare
MIT1002_01979 -3.5 -2.4 Carnitinyl-CoA dehydratase compare
MIT1002_00260 -3.5 -1.1 hypothetical protein compare
MIT1002_02971 -3.5 -5.9 Glycine dehydrogenase [decarboxylating] compare
MIT1002_00160 -3.5 -2.4 Diaminopimelate decarboxylase compare
MIT1002_02708 -3.5 -2.4 Phosphoserine phosphatase compare
MIT1002_03331 -3.5 -2.4 D-lactate dehydrogenase compare
MIT1002_03084 -3.5 -2.4 Threonine synthase compare
MIT1002_00138 -3.5 -4.1 Histone deacetylase-like amidohydrolase compare
MIT1002_00099 -3.4 -3.4 putative protoheme IX biogenesis protein compare
MIT1002_02126 -3.4 -2.1 Bacterioferritin compare
MIT1002_00843 -3.4 -2.4 hypothetical protein compare
MIT1002_00887 -3.4 -1.1 hypothetical protein compare
MIT1002_01467 -3.4 -2.4 Carbamoyl-phosphate synthase large chain compare
MIT1002_00100 -3.4 -2.4 Putative uroporphyrinogen-III C-methyltransferase compare
MIT1002_01736 -3.4 -2.4 Aminodeoxychorismate lyase compare
MIT1002_00161 -3.4 -2.4 putative small periplasmic lipoprotein compare
MIT1002_03408 -3.4 -1.1 hypothetical protein compare
MIT1002_03130 -3.4 -2.3 2-methylcitrate synthase compare
MIT1002_02306 -3.4 -2.3 Glutamate-pyruvate aminotransferase AlaA compare
MIT1002_03185 -3.4 -4.0 Nitrogen regulation protein NR(II) compare
MIT1002_02012 -3.4 -7.8 Pyruvate dehydrogenase E1 component subunit alpha compare
MIT1002_03062 -3.4 -2.3 Pyrroline-5-carboxylate reductase compare
MIT1002_02570 -3.3 -3.3 hypothetical protein compare
MIT1002_00439 -3.3 -6.0 Para-aminobenzoate synthase glutamine amidotransferase component II compare
MIT1002_02572 -3.3 -2.3 HTH-type transcriptional regulator QacR compare
MIT1002_00932 -3.3 -1.8 holin-like protein compare
MIT1002_02684 -3.3 -7.1 SnoaL-like domain protein compare
MIT1002_02286 -3.3 -2.3 Electron transfer flavoprotein large subunit compare
MIT1002_01885 -3.3 -2.3 Gamma-glutamyl phosphate reductase compare
MIT1002_01264 -3.3 -2.3 7-carboxy-7-deazaguanine synthase compare
MIT1002_02757 -3.3 -5.9 Lon protease compare
MIT1002_00437 -3.3 -2.3 Succinylornithine transaminase/acetylornithine aminotransferase compare
MIT1002_02972 -3.3 -2.3 Glycine cleavage system H protein compare
MIT1002_03323 -3.3 -4.5 Sensor histidine kinase LiaS compare
MIT1002_02020 -3.3 -4.5 Purine catabolism protein PucG compare
MIT1002_02394 -3.3 -2.2 Glyceraldehyde-3-phosphate dehydrogenase compare
MIT1002_03993 -3.3 -7.3 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MIT1002_01984 -3.2 -2.2 queuosine biosynthesis protein QueD compare
MIT1002_02014 -3.2 -4.4 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex compare
MIT1002_02576 -3.2 -5.4 hypothetical protein compare
MIT1002_02288 -3.2 -16.6 Electron transfer flavoprotein-ubiquinone oxidoreductase compare
MIT1002_03670 -3.2 -4.9 5,10-methylenetetrahydrofolate reductase compare
MIT1002_02637 -3.2 -2.2 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MIT1002_03965 -3.2 -9.4 Phosphoribulokinase, plasmid compare
MIT1002_01440 -3.2 -9.8 putative membrane protein compare
MIT1002_01150 -3.2 -7.0 Leucine-responsive regulatory protein compare
MIT1002_01662 -3.2 -2.2 Polyketide cyclase / dehydrase and lipid transport compare
MIT1002_03869 -3.2 -1.0 CsbD-like protein compare
MIT1002_02815 -3.2 -1.9 hypothetical protein compare
MIT1002_01428 -3.2 -2.2 Anthranilate synthase component II compare
MIT1002_02400 -3.1 -4.3 4-alpha-glucanotransferase compare
MIT1002_04134 -3.1 -3.1 Sporulation initiation inhibitor protein soj compare
MIT1002_02571 -3.1 -2.2 Diacylglycerol O-acyltransferase compare
MIT1002_00033 -3.1 -1.0 23S ribosomal RNA compare
MIT1002_01429 -3.1 -2.2 Anthranilate synthase component II compare
MIT1002_03085 -3.1 -2.2 Homoserine kinase compare
MIT1002_02973 -3.1 -3.7 Aminomethyltransferase compare
MIT1002_00648 -3.0 -6.5 Phosphoenolpyruvate-protein phosphotransferase compare
MIT1002_02013 -3.0 -5.0 2-oxoisovalerate dehydrogenase subunit beta compare
MIT1002_02404 -3.0 -2.1 Glucokinase compare
MIT1002_03317 -3.0 -2.1 Transcriptional regulatory protein DevR (DosR) compare
MIT1002_01834 -3.0 -7.2 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MIT1002_01340 -3.0 -3.5 tol-pal system protein YbgF compare
MIT1002_03319 -3.0 -5.7 hypothetical protein compare
MIT1002_02832 -3.0 -2.0 Nodulation protein D 2 compare
MIT1002_03200 -3.0 -2.0 RDD family protein compare
MIT1002_03830 -3.0 -5.7 HTH-type transcriptional repressor YvoA compare
MIT1002_04103 -2.9 -5.9 Galactose operon repressor compare
MIT1002_01143 -2.9 -2.8 Phage shock protein A compare
MIT1002_02892 -2.9 -2.8 HTH-type transcriptional repressor CytR compare
MIT1002_03493 -2.9 -4.4 Arginine repressor compare
MIT1002_00988 -2.8 -2.0 NADPH-dependent 7-cyano-7-deazaguanine reductase compare
MIT1002_02391 -2.8 -0.9 putative membrane protein compare
MIT1002_01295 -2.8 -2.0 Inner membrane protein YpjD compare
MIT1002_01647 -2.8 -1.3 putative glycosyltransferase compare
MIT1002_02441 -2.8 -1.9 Helix-turn-helix domain protein compare
MIT1002_00486 -2.8 -0.9 Protein-export protein SecB compare
MIT1002_00825 -2.8 -3.3 Nitrogen regulatory protein compare
MIT1002_01777 -2.8 -1.9 chromosome segregation protein SMC compare
MIT1002_01981 -2.8 -1.9 Inner membrane protein YejM compare
MIT1002_00066 -2.8 -2.7 Rhomboid protease GlpG compare
MIT1002_01923 -2.7 -5.3 Cell division protein ZipA compare
MIT1002_03186 -2.7 -1.9 Nitrogen regulation protein NR(I) compare
MIT1002_01132 -2.7 -0.9 tRNA-Arg compare
MIT1002_01917 -2.7 -1.9 hypothetical protein compare
MIT1002_04131 -2.7 -1.9 Putative membrane protein insertion efficiency factor compare
MIT1002_00970 -2.7 -2.6 UDP-glucose 4-epimerase compare
MIT1002_01316 -2.7 -1.9 P-protein compare
MIT1002_03788 -2.7 -2.5 Host factor-I protein compare
MIT1002_01001 -2.7 -3.2 PII uridylyl-transferase compare
MIT1002_02041 -2.7 -1.4 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase compare
MIT1002_02577 -2.7 -2.1 poly(hydroxyalkanoate) granule-associated protein compare
MIT1002_01544 -2.7 -1.8 D-alanyl-D-alanine carboxypeptidase compare
MIT1002_01430 -2.6 -1.8 Anthranilate synthase component 1 compare
MIT1002_00353 -2.6 -5.6 Cytoplasmic trehalase compare
MIT1002_01702 -2.6 -4.4 Glutamate-aspartate carrier protein compare
MIT1002_00753 -2.6 -1.8 Phosphate-binding protein PstS 1 precursor compare
MIT1002_02682 -2.6 -2.5 Sigma-W factor compare
MIT1002_02221 -2.6 -3.5 hypothetical protein compare
MIT1002_03116 -2.6 -1.8 Spore coat protein SA compare
MIT1002_02686 -2.6 -5.5 protoporphyrinogen oxidase compare
MIT1002_01497 -2.6 -0.8 tRNA-Met compare
MIT1002_00076 -2.5 -1.7 transcriptional regulator, y4mF family compare
MIT1002_02879 -2.5 -8.5 Glutamate-ammonia-ligase adenylyltransferase compare
MIT1002_01157 -2.5 -1.7 Outer membrane cobalamin translocator compare
MIT1002_04028 -2.5 -6.7 Cytochrome oxidase assembly protein compare
MIT1002_04026 -2.5 -4.2 BsSco compare
MIT1002_01129 -2.5 -1.7 Carbon storage regulator compare
MIT1002_02291 -2.5 -1.0 hypothetical protein compare
MIT1002_04030 -2.5 -7.9 hypothetical protein compare
MIT1002_04027 -2.5 -8.0 Protoheme IX farnesyltransferase compare
MIT1002_02991 -2.5 -1.7 putative 5-formyltetrahydrofolate cyclo-ligase compare


Specific Phenotypes

For 2 genes in this experiment

For mixed community Mixed culture; Prochlorococcus marinus str. MED4 10:1 starting OD to HP15 in Alteromonas macleodii MIT1002

For mixed community Mixed culture; Prochlorococcus marinus str. MED4 10:1 starting OD to HP15 across organisms