Experiment set1S521 for Alteromonas macleodii MIT1002

Compare to:

Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 6

200 most important genes:

  gene name fitness t score description  
MIT1002_01422 -7.1 -4.7 hypothetical protein compare
MIT1002_03785 -5.5 -3.8 Modulator of FtsH protease HflC compare
MIT1002_02348 -5.2 -3.6 hypothetical protein compare
MIT1002_03690 -5.2 -3.6 DnaK suppressor protein compare
MIT1002_03908 -5.1 -5.0 NAD(P) transhydrogenase subunit alpha compare
MIT1002_03786 -5.1 -3.5 Modulator of FtsH protease HflK compare
MIT1002_00471 -5.0 -3.5 N-acetyl-gamma-glutamyl-phosphate reductase compare
MIT1002_02429 -5.0 -3.5 Glucose-resistance amylase regulator compare
MIT1002_00504 -5.0 -3.5 Acetolactate synthase isozyme 3 small subunit compare
MIT1002_00113 -5.0 -4.9 Putative peroxiredoxin compare
MIT1002_02524 -5.0 -3.4 Amidophosphoribosyltransferase compare
MIT1002_00351 -5.0 -7.6 Degradation activator compare
MIT1002_01827 -4.9 -3.4 High frequency lysogenization protein HflD compare
MIT1002_01027 -4.9 -3.4 Phosphoribosylformylglycinamidine synthase compare
MIT1002_00948 -4.9 -3.4 3-isopropylmalate dehydrogenase compare
MIT1002_04045 -4.9 -3.4 Ketol-acid reductoisomerase compare
MIT1002_02833 -4.8 -3.3 Malate synthase G compare
MIT1002_01263 -4.8 -3.3 7-cyano-7-deazaguanine synthase compare
MIT1002_00949 -4.8 -3.3 2-isopropylmalate synthase compare
MIT1002_01763 -4.8 -2.5 Putative pterin-4-alpha-carbinolamine dehydratase compare
MIT1002_00189 -4.7 -4.6 Galactokinase compare
MIT1002_02636 -4.7 -3.3 Imidazole glycerol phosphate synthase subunit HisH compare
MIT1002_00469 -4.7 -3.3 Ornithine carbamoyltransferase compare
MIT1002_03139 -4.7 -3.2 Glutamate synthase [NADPH] large chain precursor compare
MIT1002_00946 -4.7 -3.2 3-isopropylmalate dehydratase small subunit 1 compare
MIT1002_03516 -4.7 -3.2 Acetyl-coenzyme A synthetase compare
MIT1002_00933 -4.7 -3.2 Inner membrane protein YohK compare
MIT1002_03179 -4.6 -3.2 Cystathionine beta-lyase PatB compare
MIT1002_03909 -4.6 -7.7 NAD(P) transhydrogenase subunit alpha part 1 compare
MIT1002_00826 -4.6 -2.8 Ribosome hibernation promoting factor compare
MIT1002_02220 -4.6 -3.2 Phosphoribosylglycinamide formyltransferase compare
MIT1002_03907 -4.6 -3.2 NAD(P) transhydrogenase subunit beta compare
MIT1002_01112 -4.6 -3.2 Homoserine O-succinyltransferase compare
MIT1002_02219 -4.6 -3.2 Phosphoribosylformylglycinamidine cyclo-ligase compare
MIT1002_00377 -4.6 -3.2 Branched-chain-amino-acid aminotransferase 2 compare
MIT1002_00522 -4.5 -3.1 N5-carboxyaminoimidazole ribonucleotide synthase compare
MIT1002_04040 -4.5 -3.1 L-threonine dehydratase biosynthetic IlvA compare
MIT1002_03961 -4.5 -3.1 Phosphoribosylamine--glycine ligase compare
MIT1002_02831 -4.5 -3.1 Isocitrate lyase compare
MIT1002_02349 -4.5 -3.1 2-hydroxypropyl-CoM lyase compare
MIT1002_01122 -4.4 -6.1 Bicarbonate transporter BicA compare
MIT1002_01119 -4.4 -3.1 HTH-type transcriptional regulator GltC compare
MIT1002_03086 -4.4 -3.0 Aspartokinase I/homoserine dehydrogenase I compare
MIT1002_00467 -4.3 -3.0 Argininosuccinate lyase compare
MIT1002_01266 -4.3 -3.0 Asparagine synthetase B [glutamine-hydrolyzing] compare
MIT1002_02154 -4.3 -2.2 Response regulator UvrY compare
MIT1002_00947 -4.3 -3.0 3-isopropylmalate dehydratase large subunit compare
MIT1002_02639 -4.3 -3.0 Phosphoribosyl-ATP pyrophosphatase compare
MIT1002_02638 -4.3 -3.0 Imidazole glycerol phosphate synthase subunit HisF compare
MIT1002_02266 -4.3 -2.9 Methionine gamma-lyase compare
MIT1002_04044 -4.2 -2.9 HTH-type transcriptional regulator GltC compare
MIT1002_00468 -4.2 -2.9 Argininosuccinate synthase compare
MIT1002_02993 -4.2 -2.9 D-3-phosphoglycerate dehydrogenase compare
MIT1002_03015 -4.2 -4.1 aspartoacylase compare
MIT1002_02634 -4.2 -2.9 Histidinol-phosphate aminotransferase compare
MIT1002_00466 -4.2 -2.9 Amino-acid acetyltransferase compare
MIT1002_00188 -4.2 -2.9 Galactose-1-phosphate uridylyltransferase compare
MIT1002_00485 -4.2 -2.9 Glycerol-3-phosphate dehydrogenase [NAD(P)+] compare
MIT1002_00809 -4.2 -2.9 Sensor protein QseC compare
MIT1002_00068 -4.2 -2.9 Chorismate--pyruvate lyase compare
MIT1002_03140 -4.1 -2.9 Glutamate synthase [NADPH] small chain compare
MIT1002_00138 -4.1 -2.9 Histone deacetylase-like amidohydrolase compare
MIT1002_02633 -4.1 -2.9 Histidinol dehydrogenase compare
MIT1002_02811 -4.1 -2.9 preprotein translocase subunit SecD compare
MIT1002_03321 -4.1 -4.0 Aldehyde dehydrogenase B compare
MIT1002_02702 -4.1 -2.8 Serine hydroxymethyltransferase compare
MIT1002_02635 -4.1 -2.8 Histidine biosynthesis bifunctional protein HisB compare
MIT1002_03539 -4.1 -2.2 Bifunctional protein BirA compare
MIT1002_04041 -4.0 -2.8 Dihydroxy-acid dehydratase compare
MIT1002_03698 -4.0 -2.8 tRNA (guanine-N(7)-)-methyltransferase compare
MIT1002_02810 -4.0 -2.8 preprotein translocase subunit SecF compare
MIT1002_02231 -4.0 -2.8 Phosphoglycolate phosphatase compare
MIT1002_01420 -4.0 -2.8 Virulence sensor histidine kinase PhoQ compare
MIT1002_01979 -4.0 -2.8 Carnitinyl-CoA dehydratase compare
MIT1002_03096 -4.0 -2.8 Isocitrate dehydrogenase kinase/phosphatase compare
MIT1002_01466 -4.0 -2.7 Carbamoyl-phosphate synthase small chain compare
MIT1002_03885 -4.0 -2.7 NADH dehydrogenase compare
MIT1002_02287 -4.0 -5.4 Electron transfer flavoprotein small subunit compare
MIT1002_02708 -3.9 -2.7 Phosphoserine phosphatase compare
MIT1002_00470 -3.9 -9.6 Acetylglutamate kinase compare
MIT1002_01736 -3.9 -2.7 Aminodeoxychorismate lyase compare
MIT1002_01265 -3.9 -7.9 hypothetical protein compare
MIT1002_00503 -3.9 -2.7 Acetolactate synthase isozyme 3 large subunit compare
MIT1002_03084 -3.9 -2.7 Threonine synthase compare
MIT1002_02306 -3.9 -2.7 Glutamate-pyruvate aminotransferase AlaA compare
MIT1002_01467 -3.9 -3.8 Carbamoyl-phosphate synthase large chain compare
MIT1002_02008 -3.8 -8.2 Para-aminobenzoate synthase component 1 compare
MIT1002_00099 -3.8 -2.6 putative protoheme IX biogenesis protein compare
MIT1002_00843 -3.8 -2.6 hypothetical protein compare
MIT1002_03130 -3.8 -2.6 2-methylcitrate synthase compare
MIT1002_00160 -3.8 -2.6 Diaminopimelate decarboxylase compare
MIT1002_03185 -3.8 -4.5 Nitrogen regulation protein NR(II) compare
MIT1002_01885 -3.8 -2.6 Gamma-glutamyl phosphate reductase compare
MIT1002_00932 -3.8 -2.1 holin-like protein compare
MIT1002_01984 -3.7 -2.6 queuosine biosynthesis protein QueD compare
MIT1002_03062 -3.7 -2.6 Pyrroline-5-carboxylate reductase compare
MIT1002_02394 -3.7 -2.6 Glyceraldehyde-3-phosphate dehydrogenase compare
MIT1002_00161 -3.7 -2.6 putative small periplasmic lipoprotein compare
MIT1002_03828 -3.7 -7.9 Taurine catabolism dioxygenase TauD, TfdA family compare
MIT1002_00439 -3.7 -7.1 Para-aminobenzoate synthase glutamine amidotransferase component II compare
MIT1002_01264 -3.7 -2.5 7-carboxy-7-deazaguanine synthase compare
MIT1002_02757 -3.7 -7.1 Lon protease compare
MIT1002_03300 -3.7 -10.9 HTH-type transcriptional regulator UlaR compare
MIT1002_02637 -3.6 -2.5 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MIT1002_01428 -3.6 -2.5 Anthranilate synthase component II compare
MIT1002_02571 -3.6 -2.5 Diacylglycerol O-acyltransferase compare
MIT1002_02400 -3.6 -4.3 4-alpha-glucanotransferase compare
MIT1002_00100 -3.6 -4.9 Putative uroporphyrinogen-III C-methyltransferase compare
MIT1002_01429 -3.6 -2.5 Anthranilate synthase component II compare
MIT1002_03034 -3.6 -5.0 cell division protein MraZ compare
MIT1002_00437 -3.6 -2.5 Succinylornithine transaminase/acetylornithine aminotransferase compare
MIT1002_00199 -3.6 -9.5 Glycerol-3-phosphate regulon repressor compare
MIT1002_03993 -3.6 -8.3 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MIT1002_02020 -3.5 -5.4 Purine catabolism protein PucG compare
MIT1002_03085 -3.5 -2.4 Homoserine kinase compare
MIT1002_03331 -3.5 -4.2 D-lactate dehydrogenase compare
MIT1002_03323 -3.5 -5.3 Sensor histidine kinase LiaS compare
MIT1002_02971 -3.5 -9.3 Glycine dehydrogenase [decarboxylating] compare
MIT1002_01662 -3.5 -3.4 Polyketide cyclase / dehydrase and lipid transport compare
MIT1002_02404 -3.4 -2.4 Glucokinase compare
MIT1002_02973 -3.4 -5.7 Aminomethyltransferase compare
MIT1002_02572 -3.4 -5.7 HTH-type transcriptional regulator QacR compare
MIT1002_03317 -3.4 -2.3 Transcriptional regulatory protein DevR (DosR) compare
MIT1002_00823 -3.4 -3.3 Phosphocarrier protein NPr compare
MIT1002_03200 -3.4 -2.3 RDD family protein compare
MIT1002_00648 -3.3 -6.0 Phosphoenolpyruvate-protein phosphotransferase compare
MIT1002_02832 -3.3 -2.3 Nodulation protein D 2 compare
MIT1002_01340 -3.3 -3.2 tol-pal system protein YbgF compare
MIT1002_04134 -3.3 -2.3 Sporulation initiation inhibitor protein soj compare
MIT1002_01981 -3.3 -2.3 Inner membrane protein YejM compare
MIT1002_02441 -3.3 -2.3 Helix-turn-helix domain protein compare
MIT1002_01834 -3.3 -8.9 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MIT1002_00033 -3.3 -1.1 23S ribosomal RNA compare
MIT1002_01295 -3.2 -2.2 Inner membrane protein YpjD compare
MIT1002_01001 -3.2 -3.2 PII uridylyl-transferase compare
MIT1002_00997 -3.2 -1.0 hypothetical protein compare
MIT1002_02288 -3.2 -21.8 Electron transfer flavoprotein-ubiquinone oxidoreductase compare
MIT1002_01917 -3.2 -2.2 hypothetical protein compare
MIT1002_03186 -3.2 -2.2 Nitrogen regulation protein NR(I) compare
MIT1002_01544 -3.1 -2.2 D-alanyl-D-alanine carboxypeptidase compare
MIT1002_01316 -3.1 -2.2 P-protein compare
MIT1002_01430 -3.1 -2.1 Anthranilate synthase component 1 compare
MIT1002_02892 -3.1 -3.0 HTH-type transcriptional repressor CytR compare
MIT1002_00988 -3.1 -3.0 NADPH-dependent 7-cyano-7-deazaguanine reductase compare
MIT1002_03965 -3.1 -10.1 Phosphoribulokinase, plasmid compare
MIT1002_01816 -3.1 -16.6 Phosphoenolpyruvate synthase compare
MIT1002_02682 -3.1 -3.0 Sigma-W factor compare
MIT1002_04131 -3.0 -2.1 Putative membrane protein insertion efficiency factor compare
MIT1002_03116 -3.0 -2.1 Spore coat protein SA compare
MIT1002_01035 -3.0 -3.6 anti-sigma28 factor FlgM compare
MIT1002_01995 -3.0 -6.1 putative rhodanese-related sulfurtransferase compare
MIT1002_00486 -3.0 -1.0 Protein-export protein SecB compare
MIT1002_01777 -3.0 -2.9 chromosome segregation protein SMC compare
MIT1002_01157 -3.0 -2.0 Outer membrane cobalamin translocator compare
MIT1002_03058 -3.0 -1.3 hypothetical protein compare
MIT1002_01129 -2.9 -2.0 Carbon storage regulator compare
MIT1002_01923 -2.9 -7.8 Cell division protein ZipA compare
MIT1002_02632 -2.9 -2.0 ATP phosphoribosyltransferase compare
MIT1002_00888 -2.9 -4.0 Organic hydroperoxide resistance transcriptional regulator compare
MIT1002_03371 -2.9 -3.4 HTH-type transcriptional repressor FabR compare
MIT1002_01217 -2.9 -2.0 2-dehydropantoate 2-reductase compare
MIT1002_03050 -2.9 -10.9 3-oxoacyl-[acyl-carrier-protein] synthase 3 compare
MIT1002_01143 -2.8 -3.9 Phage shock protein A compare
MIT1002_00076 -2.8 -1.9 transcriptional regulator, y4mF family compare
MIT1002_02991 -2.8 -1.9 putative 5-formyltetrahydrofolate cyclo-ligase compare
MIT1002_00742 -2.8 -5.6 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
MIT1002_02653 -2.8 -1.3 Nucleoid-associated protein YbaB compare
MIT1002_02573 -2.7 -1.9 hypothetical protein compare
MIT1002_02014 -2.7 -8.8 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex compare
MIT1002_02286 -2.7 -5.5 Electron transfer flavoprotein large subunit compare
MIT1002_02570 -2.7 -7.1 hypothetical protein compare
MIT1002_03616 -2.7 -1.9 NAD(P)H-flavin reductase compare
MIT1002_00833 -2.7 -1.8 Inner membrane protein YrbG compare
MIT1002_01676 -2.7 -0.9 Exodeoxyribonuclease I compare
MIT1002_04026 -2.7 -4.8 BsSco compare
MIT1002_00883 -2.6 -1.8 putative transmembrane transcriptional regulator (anti-sigma factor) compare
MIT1002_00872 -2.6 -7.6 Polyphosphate kinase compare
MIT1002_00423 -2.6 -1.8 Aspartate carbamoyltransferase catalytic chain compare
MIT1002_01526 -2.6 -0.8 putative transposase OrfB compare
MIT1002_03082 -2.6 -2.2 hypothetical protein compare
MIT1002_00066 -2.6 -3.1 Rhomboid protease GlpG compare
MIT1002_02221 -2.6 -4.7 hypothetical protein compare
MIT1002_00877 -2.6 -1.8 Repressor protein PhoU compare
MIT1002_00647 -2.6 -3.5 RNA pyrophosphohydrolase compare
MIT1002_00521 -2.6 -1.8 N5-carboxyaminoimidazole ribonucleotide mutase compare
MIT1002_02760 -2.6 -1.8 ATP-dependent Clp protease proteolytic subunit precursor compare
MIT1002_03162 -2.6 -1.4 Iron-sulfur cluster insertion protein ErpA compare
MIT1002_01833 -2.6 -1.7 ATP-dependent Clp protease adapter protein ClpS compare
MIT1002_02684 -2.6 -6.6 SnoaL-like domain protein compare
MIT1002_04092 -2.5 -1.7 putative type I restriction enzymeP M protein compare
MIT1002_01352 -2.5 -9.1 Aspartate-semialdehyde dehydrogenase compare
MIT1002_03026 -2.5 -1.1 Cell division protein FtsW compare
MIT1002_01427 -2.5 -1.7 Tryptophan biosynthesis protein TrpCF compare
MIT1002_00844 -2.5 -2.4 AFG1-like ATPase compare
MIT1002_02815 -2.5 -2.1 hypothetical protein compare
MIT1002_00410 -2.5 -1.3 hypothetical protein compare
MIT1002_01192 -2.4 -4.0 Peptide chain release factor 3 compare
MIT1002_04103 -2.4 -7.9 Galactose operon repressor compare
MIT1002_00827 -2.4 -1.7 RNA polymerase sigma-54 factor 2 compare
MIT1002_01840 -2.4 -7.8 Protease 4 compare


Specific Phenotypes

For 1 genes in this experiment

For mixed community Mixed culture; Prochlorococcus marinus str. MED4 10:1 starting OD to HP15 in Alteromonas macleodii MIT1002

For mixed community Mixed culture; Prochlorococcus marinus str. MED4 10:1 starting OD to HP15 across organisms