Experiment set1S517 for Paraburkholderia sabiae LMG 24235

Compare to:

LB_noSalt with Cobalt chloride hexahydrate 0.25 mM

200 most important genes:

  gene name fitness t score description  
QEN71_RS42235 -3.7 -2.5 nitrogenase stabilizing/protective protein NifW compare
QEN71_RS00180 -3.3 -5.0 DUF4390 domain-containing protein compare
QEN71_RS06190 -3.3 -2.2 C40 family peptidase compare
QEN71_RS01745 -3.3 -5.9 PTS sugar transporter subunit IIA compare
QEN71_RS05615 -3.0 -3.5 oxidative damage protection protein compare
QEN71_RS27915 -2.9 -3.4 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
QEN71_RS28105 -2.9 -2.0 c-type cytochrome compare
QEN71_RS28920 -2.9 -2.4 flagellar basal body rod protein FlgB compare
QEN71_RS01945 -2.9 -2.1 MarR family transcriptional regulator compare
QEN71_RS27900 -2.9 -5.8 ABC transporter substrate-binding protein compare
QEN71_RS26780 -2.8 -4.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
QEN71_RS27920 -2.8 -4.6 ABC transporter ATP-binding protein compare
QEN71_RS06310 -2.7 -1.9 lysophospholipid transporter LplT compare
QEN71_RS21425 -2.7 -11.0 HAMP domain-containing sensor histidine kinase compare
QEN71_RS25690 -2.7 -4.1 glycosyltransferase family 4 protein compare
QEN71_RS05450 -2.5 -3.4 outer membrane protein assembly factor BamC compare
QEN71_RS27785 -2.5 -2.9 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
QEN71_RS25705 -2.4 -3.2 FdtA/QdtA family cupin domain-containing protein compare
QEN71_RS02150 -2.3 -3.8 lysophospholipid acyltransferase family protein compare
QEN71_RS26950 -2.3 -2.6 LPS assembly lipoprotein LptE compare
QEN71_RS37615 -2.2 -1.8 DoxX family protein compare
QEN71_RS17545 -2.2 -4.2 hypothetical protein compare
QEN71_RS25715 -2.1 -5.2 acetyltransferase compare
QEN71_RS27675 -2.1 -3.4 peptide chain release factor N(5)-glutamine methyltransferase compare
QEN71_RS11870 -2.1 -2.8 alkanesulfonate monooxygenase compare
QEN71_RS06505 -2.0 -8.2 phosphoenolpyruvate synthase compare
QEN71_RS02425 -1.9 -2.5 phosphoglycerate kinase compare
QEN71_RS33430 -1.9 -1.3 hypothetical protein compare
QEN71_RS22510 -1.9 -4.3 anti-sigma factor compare
QEN71_RS26480 -1.9 -2.9 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
QEN71_RS28940 -1.9 -5.0 RNA polymerase sigma factor FliA compare
QEN71_RS37145 -1.9 -4.4 TetR family transcriptional regulator compare
QEN71_RS26855 -1.8 -2.4 dihydroorotase compare
QEN71_RS00185 -1.8 -6.2 PAS domain-containing sensor histidine kinase compare
QEN71_RS16440 -1.8 -2.4 presqualene diphosphate synthase HpnD compare
QEN71_RS27345 -1.8 -2.3 bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ compare
QEN71_RS25700 -1.8 -4.6 DegT/DnrJ/EryC1/StrS family aminotransferase compare
QEN71_RS25695 -1.7 -7.9 glycosyltransferase family 4 protein compare
QEN71_RS25630 -1.7 -4.6 NAD-dependent epimerase/dehydratase family protein compare
QEN71_RS41735 -1.7 -2.0 DUF1488 family protein compare
QEN71_RS01445 -1.7 -5.7 2,3-diphosphoglycerate-dependent phosphoglycerate mutase compare
QEN71_RS06355 -1.7 -5.3 succinyl-diaminopimelate desuccinylase compare
QEN71_RS25710 -1.7 -6.6 GNAT family N-acetyltransferase compare
QEN71_RS14065 -1.7 -2.0 hypothetical protein compare
QEN71_RS01820 -1.6 -11.0 AI-2E family transporter compare
QEN71_RS16000 -1.6 -1.5 LysR substrate-binding domain-containing protein compare
QEN71_RS43335 -1.6 -2.1 hypothetical protein compare
QEN71_RS27895 -1.6 -1.8 STAS domain-containing protein compare
QEN71_RS21975 -1.6 -6.3 endopeptidase La compare
QEN71_RS13970 -1.6 -2.3 VOC family protein compare
QEN71_RS23370 -1.6 -3.4 arginine/ornithine succinyltransferase subunit alpha compare
QEN71_RS25720 -1.5 -5.0 SAM-dependent methyltransferase compare
QEN71_RS27795 -1.5 -5.8 Do family serine endopeptidase compare
QEN71_RS10925 -1.5 -1.2 helix-turn-helix domain-containing protein compare
QEN71_RS26775 -1.5 -4.2 Fis family transcriptional regulator compare
QEN71_RS19340 -1.5 -2.5 BON domain-containing protein compare
QEN71_RS25725 -1.5 -8.5 ABC transporter ATP-binding protein compare
QEN71_RS23380 -1.5 -1.8 GlxA family transcriptional regulator compare
QEN71_RS10525 -1.5 -1.5 amidohydrolase family protein compare
QEN71_RS25045 -1.4 -10.1 translocation/assembly module TamB domain-containing protein compare
QEN71_RS03260 -1.4 -4.1 UbiD family decarboxylase compare
QEN71_RS16515 -1.4 -2.6 DNA-binding protein compare
QEN71_RS20350 -1.4 -2.6 hypothetical protein compare
QEN71_RS03745 -1.4 -3.5 TlpA family protein disulfide reductase compare
QEN71_RS11760 -1.4 -1.8 tautomerase family protein compare
QEN71_RS06500 -1.4 -1.7 pyruvate, water dikinase regulatory protein compare
QEN71_RS27005 -1.4 -4.9 type I glyceraldehyde-3-phosphate dehydrogenase compare
QEN71_RS18635 -1.4 -1.6 hypothetical protein compare
QEN71_RS04575 -1.4 -5.4 RNA polymerase sigma factor RpoE compare
QEN71_RS25730 -1.4 -4.7 ABC transporter permease compare
QEN71_RS26275 -1.3 -3.7 tol-pal system protein YbgF compare
QEN71_RS28990 -1.3 -3.6 chemoreceptor glutamine deamidase CheD compare
QEN71_RS01545 -1.3 -4.3 heme o synthase compare
QEN71_RS30880 -1.3 -3.4 hypothetical protein compare
QEN71_RS11365 -1.3 -1.2 hypothetical protein compare
QEN71_RS21420 -1.3 -1.7 response regulator compare
QEN71_RS33650 -1.3 -2.6 substrate-binding domain-containing protein compare
QEN71_RS18740 -1.3 -1.3 hypothetical protein compare
QEN71_RS01440 -1.3 -4.0 S41 family peptidase compare
QEN71_RS44385 -1.3 -1.6 integrase compare
QEN71_RS25420 -1.3 -4.5 oligosaccharide flippase family protein compare
QEN71_RS21935 -1.3 -5.0 glucose-6-phosphate isomerase compare
QEN71_RS29690 -1.3 -1.7 hypothetical protein compare
QEN71_RS07830 -1.3 -1.4 hypothetical protein compare
QEN71_RS03785 -1.3 -5.4 aminopeptidase N compare
QEN71_RS17135 -1.3 -1.1 hypothetical protein compare
QEN71_RS22400 -1.2 -6.2 threonine synthase compare
QEN71_RS32235 -1.2 -2.1 cytochrome P460 family protein compare
QEN71_RS15560 -1.2 -3.1 catalase compare
QEN71_RS37590 -1.2 -1.3 DUF4148 domain-containing protein compare
QEN71_RS07610 -1.2 -1.5 hypothetical protein compare
QEN71_RS01240 -1.2 -1.4 acyl-ACP desaturase compare
QEN71_RS05840 -1.2 -1.9 regulator compare
QEN71_RS44550 -1.2 -2.6 tyrosine-type recombinase/integrase compare
QEN71_RS38865 -1.2 -3.3 Ohr family peroxiredoxin compare
QEN71_RS01430 -1.2 -3.2 phosphoenolpyruvate--protein phosphotransferase compare
QEN71_RS28925 -1.2 -5.2 flagellar basal body P-ring formation chaperone FlgA compare
QEN71_RS22330 -1.2 -2.4 glycosyltransferase family 39 protein compare
QEN71_RS21065 -1.1 -1.4 sigma factor-like helix-turn-helix DNA-binding protein compare
QEN71_RS28070 -1.1 -4.3 iron donor protein CyaY compare
QEN71_RS32715 -1.1 -1.3 formylmethanofuran dehydrogenase compare
QEN71_RS24825 -1.1 -3.2 nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein compare
QEN71_RS01305 -1.1 -3.3 DUF493 family protein compare
QEN71_RS03880 -1.1 -3.6 hypothetical protein compare
QEN71_RS28915 -1.1 -4.1 flagellar basal body rod protein FlgC compare
QEN71_RS17600 -1.1 -8.5 citrate synthase compare
QEN71_RS36410 -1.1 -1.0 HutD family protein compare
QEN71_RS26195 -1.1 -1.9 phage holin family protein compare
QEN71_RS22015 -1.1 -6.4 squalene/phytoene synthase family protein compare
QEN71_RS39775 -1.1 -1.5 alcohol dehydrogenase catalytic domain-containing protein compare
QEN71_RS29895 -1.0 -1.9 hypothetical protein compare
QEN71_RS03740 -1.0 -4.0 sialidase family protein compare
QEN71_RS36600 -1.0 -2.0 carbohydrate ABC transporter permease compare
QEN71_RS38345 -1.0 -1.0 CBS domain-containing protein compare
QEN71_RS40510 -1.0 -1.3 IS110 family transposase compare
QEN71_RS36660 -1.0 -1.4 DeoR/GlpR family DNA-binding transcription regulator compare
QEN71_RS24005 -1.0 -1.2 putative toxin-antitoxin system toxin component, PIN family compare
QEN71_RS36010 -1.0 -1.6 MFS transporter compare
QEN71_RS18650 -1.0 -2.1 BON domain-containing protein compare
QEN71_RS16400 -1.0 -5.7 adenosyl-hopene transferase HpnH compare
QEN71_RS25050 -1.0 -7.5 autotransporter assembly complex family protein compare
QEN71_RS08645 -1.0 -1.3 GTP cyclohydrolase II compare
QEN71_RS30180 -1.0 -1.2 hypothetical protein compare
QEN71_RS33865 -1.0 -1.8 sugar-binding transcriptional regulator compare
QEN71_RS34915 -1.0 -1.6 IS1182 family transposase compare
QEN71_RS32485 -1.0 -1.0 aminotransferase class V-fold PLP-dependent enzyme compare
QEN71_RS04890 -1.0 -1.7 hypothetical protein compare
QEN71_RS03970 -1.0 -2.9 tetratricopeptide repeat protein compare
QEN71_RS34310 -1.0 -2.1 hypothetical protein compare
QEN71_RS28980 -1.0 -2.9 chemotaxis response regulator CheY compare
QEN71_RS36025 -1.0 -2.0 cupin domain-containing protein compare
QEN71_RS03980 -1.0 -2.5 cation diffusion facilitator family transporter compare
QEN71_RS06455 -1.0 -4.8 RIP metalloprotease RseP compare
QEN71_RS15745 -1.0 -2.0 DUF3331 domain-containing protein compare
QEN71_RS43465 -1.0 -2.7 hypothetical protein compare
QEN71_RS05420 -0.9 -1.0 amino acid ABC transporter ATP-binding protein compare
QEN71_RS03645 -0.9 -1.7 ribonuclease PH compare
QEN71_RS27910 -0.9 -3.2 outer membrane lipid asymmetry maintenance protein MlaD compare
QEN71_RS24565 -0.9 -2.9 DUF1841 family protein compare
QEN71_RS17975 -0.9 -4.2 helix-turn-helix domain-containing protein compare
QEN71_RS04845 -0.9 -3.3 phosphate regulon transcriptional regulator PhoB compare
QEN71_RS03690 -0.9 -4.0 porin compare
QEN71_RS04600 -0.9 -4.7 translation elongation factor 4 compare
QEN71_RS07090 -0.9 -4.7 ABC-F family ATPase compare
QEN71_RS28885 -0.9 -2.1 flagellar basal body P-ring protein FlgI compare
QEN71_RS03090 -0.9 -3.3 peptidylprolyl isomerase compare
QEN71_RS32800 -0.9 -1.0 dihydroneopterin aldolase compare
QEN71_RS44240 -0.9 -1.1 transposase compare
QEN71_RS28095 -0.9 -2.9 c-type cytochrome biogenesis protein CcsB compare
QEN71_RS44285 -0.9 -3.0 IS110 family transposase compare
QEN71_RS33070 -0.9 -1.0 YMGG-like glycine zipper-containing protein compare
QEN71_RS28895 -0.9 -2.1 flagellar basal-body rod protein FlgG compare
QEN71_RS24720 -0.9 -1.2 DUF4399 domain-containing protein compare
QEN71_RS36740 -0.9 -1.5 lytic transglycosylase domain-containing protein compare
QEN71_RS32030 -0.9 -1.8 GNAT family N-acetyltransferase compare
QEN71_RS22785 -0.9 -2.0 hypothetical protein compare
QEN71_RS13040 -0.9 -1.9 LysR substrate-binding domain-containing protein compare
QEN71_RS22490 -0.9 -1.6 50S ribosomal protein L9 compare
QEN71_RS01420 -0.9 -3.3 PTS sugar transporter subunit IIB compare
QEN71_RS15805 -0.9 -3.5 cyclic peptide export ABC transporter compare
QEN71_RS26895 -0.9 -3.4 LysR substrate-binding domain-containing protein compare
QEN71_RS22925 -0.9 -4.3 ribonuclease R compare
QEN71_RS24450 -0.9 -6.9 O-antigen ligase family protein compare
QEN71_RS43010 -0.9 -1.0 cold-shock protein compare
QEN71_RS25350 -0.9 -1.3 urea ABC transporter ATP-binding protein UrtD compare
QEN71_RS03990 -0.9 -1.3 formate dehydrogenase subunit delta compare
QEN71_RS40590 -0.9 -2.5 transposase DNA-binding-containing protein compare
QEN71_RS02350 -0.8 -7.5 ADP-forming succinate--CoA ligase subunit beta compare
QEN71_RS09845 -0.8 -0.8 peptide-methionine (R)-S-oxide reductase MsrB compare
QEN71_RS32445 -0.8 -1.0 DUF971 domain-containing protein compare
QEN71_RS38825 -0.8 -2.8 aldo/keto reductase compare
QEN71_RS34635 -0.8 -1.0 helix-turn-helix transcriptional regulator compare
QEN71_RS16900 -0.8 -1.7 hypothetical protein compare
QEN71_RS15475 -0.8 -1.9 protein tyrosine phosphatase compare
QEN71_RS19370 -0.8 -1.1 hypothetical protein compare
QEN71_RS02355 -0.8 -6.9 succinate--CoA ligase subunit alpha compare
QEN71_RS24745 -0.8 -0.9 hypothetical protein compare
QEN71_RS34050 -0.8 -2.3 aspartate kinase compare
QEN71_RS11065 -0.8 -1.9 proline/glycine betaine ABC transporter permease compare
QEN71_RS37535 -0.8 -1.2 DUF3331 domain-containing protein compare
QEN71_RS42775 -0.8 -0.9 transposase zinc-binding domain-containing protein compare
QEN71_RS42455 -0.8 -1.8 IS110 family transposase compare
QEN71_RS21980 -0.8 -3.3 ATP-dependent Clp protease ATP-binding subunit ClpX compare
QEN71_RS17850 -0.8 -2.5 homoserine kinase compare
QEN71_RS35240 -0.8 -1.0 IS5/IS1182 family transposase compare
QEN71_RS25205 -0.8 -2.6 leucyl aminopeptidase compare
QEN71_RS44225 -0.8 -2.0 hypothetical protein compare
QEN71_RS16405 -0.8 -2.9 ABC transporter substrate-binding protein compare
QEN71_RS16220 -0.8 -1.4 DUF1427 family protein compare
QEN71_RS00360 -0.8 -2.7 DUF484 family protein compare
QEN71_RS38410 -0.8 -3.7 sugar ABC transporter ATP-binding protein compare
QEN71_RS34610 -0.8 -3.2 type VI secretion system tip protein TssI/VgrG compare
QEN71_RS42940 -0.8 -1.5 CopG family transcriptional regulator compare
QEN71_RS17490 -0.8 -2.6 ATPase, T2SS/T4P/T4SS family compare
QEN71_RS03975 -0.8 -3.1 metalloregulator ArsR/SmtB family transcription factor compare
QEN71_RS18320 -0.8 -2.0 thiolase family protein compare
QEN71_RS39265 -0.8 -0.9 LysR family transcriptional regulator compare
QEN71_RS12795 -0.8 -1.4 hypothetical protein compare
QEN71_RS25425 -0.8 -2.2 glycosyltransferase compare
QEN71_RS15225 -0.8 -2.9 GTP cyclohydrolase FolE2 compare


Specific Phenotypes

None in this experiment

For Paraburkholderia sabiae LMG 24235 in stress experiments

For stress Cobalt chloride hexahydrate across organisms