Experiment set1S51 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum

200 most important genes:

  gene name fitness t score description  
MPMX19_03906 -4.4 -17.7 Pca regulon regulatory protein compare
MPMX19_04112 -3.1 -7.9 hypothetical protein compare
MPMX19_05680 -2.8 -5.4 Cell cycle response regulator CtrA compare
MPMX19_06547 -2.6 -8.1 hypothetical protein compare
MPMX19_00530 -2.5 -4.8 Orotate phosphoribosyltransferase compare
MPMX19_02543 -2.5 -2.9 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_00838 -2.5 -4.0 GTP pyrophosphokinase rsh compare
MPMX19_04208 -2.3 -5.1 flagellum biosynthesis repressor protein FlbT compare
MPMX19_02267 -2.3 -1.6 hypothetical protein compare
MPMX19_02657 -2.2 -17.4 Glutamate synthase [NADPH] large chain compare
MPMX19_01483 -2.1 -12.2 Flagellar basal-body rod protein FlgG compare
MPMX19_00862 -2.1 -10.2 hypothetical protein compare
MPMX19_05678 -2.1 -7.3 hypothetical protein compare
MPMX19_02511 -2.1 -3.1 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase compare
MPMX19_01545 -2.0 -1.4 Lon protease compare
MPMX19_00866 -2.0 -9.5 Flagellar biosynthetic protein FliR compare
MPMX19_01053 -2.0 -4.5 Dihydroorotase compare
MPMX19_01054 -2.0 -6.9 Aspartate carbamoyltransferase compare
MPMX19_00129 -1.9 -2.5 hypothetical protein compare
MPMX19_00705 -1.9 -4.0 Cell division coordinator CpoB compare
MPMX19_00841 -1.9 -2.6 Holo-[acyl-carrier-protein] synthase compare
MPMX19_01113 -1.9 -3.0 Adaptive-response sensory-kinase SasA compare
MPMX19_00128 -1.9 -10.9 hypothetical protein compare
MPMX19_00864 -1.8 -4.7 Flagellar hook-basal body complex protein FliE compare
MPMX19_01718 -1.8 -3.1 Ribosomal large subunit pseudouridine synthase C compare
MPMX19_03194 -1.7 -3.1 hypothetical protein compare
MPMX19_00867 -1.7 -12.2 Flagellar biosynthetic protein FlhB compare
MPMX19_04087 -1.7 -4.2 Flagellum site-determining protein YlxH compare
MPMX19_02658 -1.7 -11.0 Glutamate synthase [NADPH] small chain compare
MPMX19_00858 -1.7 -5.6 Flagellar biosynthetic protein FliP compare
MPMX19_01484 -1.6 -5.6 Flagellar basal-body rod protein FlgG compare
MPMX19_02320 -1.6 -1.6 HTH-type transcriptional regulator GltR compare
MPMX19_06967 -1.6 -2.5 hypothetical protein compare
MPMX19_04008 -1.6 -2.9 Beta-peptidyl aminopeptidase BapA compare
MPMX19_04094 -1.6 -9.5 Flagellar M-ring protein compare
MPMX19_04093 -1.6 -4.5 hypothetical protein compare
MPMX19_00208 -1.5 -2.1 hypothetical protein compare
MPMX19_05679 -1.5 -9.5 Flagellum-specific ATP synthase compare
MPMX19_04000 -1.5 -3.1 Flagellar motor switch protein FliG compare
MPMX19_04114 -1.5 -2.9 hypothetical protein compare
MPMX19_02674 -1.5 -2.3 NADH:quinone reductase compare
MPMX19_00794 -1.5 -4.2 Transcriptional activator protein CopR compare
MPMX19_03694 -1.5 -2.0 hypothetical protein compare
MPMX19_00311 -1.4 -12.1 hypothetical protein compare
MPMX19_00126 -1.4 -2.7 hypothetical protein compare
MPMX19_02084 -1.4 -2.2 hypothetical protein compare
MPMX19_06644 -1.4 -11.4 GDP-mannose 4,6-dehydratase compare
MPMX19_06211 -1.4 -2.2 tRNA-Ala compare
MPMX19_01497 -1.4 -3.6 hypothetical protein compare
MPMX19_01796 -1.4 -1.7 hypothetical protein compare
MPMX19_04222 -1.4 -10.4 hypothetical protein compare
MPMX19_04149 -1.3 -2.8 hypothetical protein compare
MPMX19_04089 -1.3 -9.4 Flagellar biosynthesis protein FlhA compare
MPMX19_06179 -1.3 -1.8 putative SURF1-like protein compare
MPMX19_04092 -1.3 -5.9 Flagellar motor switch protein FliN compare
MPMX19_00863 -1.3 -6.2 Flagellar basal-body rod protein FlgC compare
MPMX19_00714 -1.3 -6.3 Ferrous-iron efflux pump FieF compare
MPMX19_02011 -1.3 -2.8 RNA helicase CrhR compare
MPMX19_01884 -1.3 -2.8 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_01076 -1.3 -2.2 Molybdopterin synthase catalytic subunit compare
MPMX19_02981 -1.2 -4.8 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_05727 -1.2 -6.2 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_02675 -1.2 -9.7 Phosphoenolpyruvate-dependent phosphotransferase system compare
MPMX19_04205 -1.2 -3.5 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_01822 -1.2 -5.6 2-isopropylmalate synthase compare
MPMX19_05872 -1.2 -2.9 Redox-sensitive transcriptional activator SoxR compare
MPMX19_04954 -1.2 -2.5 Putative hydro-lyase compare
MPMX19_00854 -1.2 -10.1 hypothetical protein compare
MPMX19_05387 -1.2 -2.1 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
MPMX19_05825 -1.2 -2.8 hypothetical protein compare
MPMX19_00182 -1.2 -2.4 hypothetical protein compare
MPMX19_02714 -1.2 -2.0 hypothetical protein compare
MPMX19_00167 -1.2 -1.9 hypothetical protein compare
MPMX19_04869 -1.1 -4.2 DNA polymerase I compare
MPMX19_06253 -1.1 -2.3 hypothetical protein compare
MPMX19_03752 -1.1 -2.1 hypothetical protein compare
MPMX19_02559 -1.1 -2.7 7-methyl-GTP pyrophosphatase compare
MPMX19_03491 -1.1 -2.1 putative FAD-linked oxidoreductase compare
MPMX19_04207 -1.1 -3.1 hypothetical protein compare
MPMX19_00152 -1.1 -2.1 hypothetical protein compare
MPMX19_01630 -1.1 -3.1 Phosphoribosylamine--glycine ligase compare
MPMX19_01400 -1.1 -2.7 hypothetical protein compare
MPMX19_04903 -1.0 -3.0 hypothetical protein compare
MPMX19_05442 -1.0 -2.5 Ribosomal large subunit pseudouridine synthase D compare
MPMX19_06337 -1.0 -3.3 Arsenic resistance transcriptional regulator ArsR1 compare
MPMX19_01243 -1.0 -1.6 hypothetical protein compare
MPMX19_01485 -1.0 -7.3 hypothetical protein compare
MPMX19_00906 -1.0 -7.4 Amidophosphoribosyltransferase compare
MPMX19_01883 -1.0 -5.4 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_06193 -1.0 -2.0 Flagellar hook-basal body complex protein FliE compare
MPMX19_06734 -1.0 -8.5 Alginate biosynthesis protein AlgA compare
MPMX19_05714 -1.0 -5.7 hypothetical protein compare
MPMX19_01645 -1.0 -2.2 HTH-type transcriptional regulator GltC compare
MPMX19_01494 -1.0 -5.3 Flagellar P-ring protein compare
MPMX19_06353 -1.0 -1.4 hypothetical protein compare
MPMX19_03724 -1.0 -1.6 hypothetical protein compare
MPMX19_02268 -1.0 -3.1 hypothetical protein compare
MPMX19_04171 -0.9 -1.7 16S ribosomal RNA compare
MPMX19_04206 -0.9 -4.1 3-oxoacyl-[acyl-carrier-protein] synthase 3 compare
MPMX19_01153 -0.9 -2.6 hypothetical protein compare
MPMX19_04258 -0.9 -1.9 hypothetical protein compare
MPMX19_05459 -0.9 -1.7 hypothetical protein compare
MPMX19_01998 -0.9 -4.2 3-isopropylmalate dehydratase large subunit compare
MPMX19_00694 -0.9 -2.2 2',3'-cyclic-nucleotide 2'-phosphodiesterase compare
MPMX19_02664 -0.9 -1.4 Arabinose 5-phosphate isomerase KdsD compare
MPMX19_05119 -0.9 -6.9 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_01777 -0.9 -2.5 2-aminoadipate transaminase compare
MPMX19_04200 -0.9 -5.4 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase compare
MPMX19_04199 -0.9 -5.5 Pseudaminic acid synthase compare
MPMX19_01703 -0.9 -1.5 hypothetical protein compare
MPMX19_02379 -0.9 -2.8 hypothetical protein compare
MPMX19_01249 -0.9 -1.5 Periplasmic serine endoprotease DegP compare
MPMX19_04996 -0.9 -2.0 hypothetical protein compare
MPMX19_04218 -0.9 -4.1 Protein phosphatase PrpC compare
MPMX19_00142 -0.9 -1.4 hypothetical protein compare
MPMX19_04013 -0.9 -2.1 hypothetical protein compare
MPMX19_01496 -0.9 -5.2 hypothetical protein compare
MPMX19_01304 -0.9 -5.4 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_03760 -0.9 -2.4 Ribose import binding protein RbsB compare
MPMX19_06577 -0.9 -6.1 hypothetical protein compare
MPMX19_01486 -0.9 -5.5 Flagellar L-ring protein compare
MPMX19_06544 -0.8 -6.6 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) compare
MPMX19_01560 -0.8 -1.5 3'-5' exonuclease DinG compare
MPMX19_01365 -0.8 -1.3 hypothetical protein compare
MPMX19_02779 -0.8 -1.3 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_03734 -0.8 -1.2 RutC family protein YjgH compare
MPMX19_06545 -0.8 -7.0 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase compare
MPMX19_02979 -0.8 -2.8 Hydrogen cyanide synthase subunit HcnB compare
MPMX19_00609 -0.8 -2.1 Chemotaxis protein CheY compare
MPMX19_01395 -0.8 -1.6 hypothetical protein compare
MPMX19_05144 -0.8 -1.2 hypothetical protein compare
MPMX19_03420 -0.8 -1.6 hypothetical protein compare
MPMX19_04624 -0.8 -4.5 hypothetical protein compare
MPMX19_03822 -0.8 -1.6 Sulfur carrier protein FdhD compare
MPMX19_00194 -0.8 -3.0 hypothetical protein compare
MPMX19_00089 -0.8 -2.1 hypothetical protein compare
MPMX19_02980 -0.8 -1.2 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_03787 -0.8 -1.1 hypothetical protein compare
MPMX19_06768 -0.8 -2.0 hypothetical protein compare
MPMX19_06381 -0.8 -1.3 putative manganese efflux pump MntP compare
MPMX19_00304 -0.8 -2.2 Phosphatidylcholine synthase compare
MPMX19_06090 -0.8 -1.2 Pyruvate dehydrogenase complex repressor compare
MPMX19_03890 -0.8 -2.7 Riboflavin transport system permease protein RibX compare
MPMX19_04179 -0.7 -4.0 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_02531 -0.7 -1.0 hypothetical protein compare
MPMX19_04466 -0.7 -1.4 hypothetical protein compare
MPMX19_05313 -0.7 -1.1 4,4'-diapolycopene aldehyde oxidase compare
MPMX19_00134 -0.7 -2.3 hypothetical protein compare
MPMX19_06880 -0.7 -1.5 Validamycin A dioxygenase compare
MPMX19_00149 -0.7 -3.4 hypothetical protein compare
MPMX19_02736 -0.7 -4.7 Tryptophan synthase beta chain compare
MPMX19_05658 -0.7 -1.3 hypothetical protein compare
MPMX19_00234 -0.7 -2.4 hypothetical protein compare
MPMX19_02136 -0.7 -1.0 Phage shock protein A compare
MPMX19_06001 -0.7 -2.7 hypothetical protein compare
MPMX19_06475 -0.7 -2.2 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_01708 -0.7 -2.1 hypothetical protein compare
MPMX19_05472 -0.7 -2.4 hypothetical protein compare
MPMX19_06306 -0.7 -2.0 hypothetical protein compare
MPMX19_02516 -0.7 -3.0 hypothetical protein compare
MPMX19_03784 -0.7 -1.4 hypothetical protein compare
MPMX19_02177 -0.7 -1.9 Succinylornithine transaminase/acetylornithine aminotransferase compare
MPMX19_04921 -0.7 -1.7 HTH-type transcriptional regulator PuuR compare
MPMX19_05796 -0.7 -2.3 HTH-type transcriptional repressor BdcR compare
MPMX19_06111 -0.7 -2.4 Non-motile and phage-resistance protein compare
MPMX19_04647 -0.7 -2.1 hypothetical protein compare
MPMX19_06580 -0.7 -3.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_01720 -0.7 -1.9 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB compare
MPMX19_01376 -0.7 -1.9 hypothetical protein compare
MPMX19_02080 -0.7 -2.8 Translation initiation factor IF-3 compare
MPMX19_00139 -0.7 -2.6 hypothetical protein compare
MPMX19_06044 -0.7 -1.3 hypothetical protein compare
MPMX19_04081 -0.7 -1.3 hypothetical protein compare
MPMX19_00633 -0.7 -3.8 Intermembrane phospholipid transport system lipoprotein MlaA compare
MPMX19_06746 -0.7 -0.9 Chemotaxis protein CheW compare
MPMX19_06271 -0.7 -4.8 hypothetical protein compare
MPMX19_03859 -0.7 -1.7 hypothetical protein compare
MPMX19_00472 -0.7 -1.6 Protein HesB, heterocyst compare
MPMX19_04615 -0.7 -1.1 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_00696 -0.7 -3.0 Crossover junction endodeoxyribonuclease RuvC compare
MPMX19_02927 -0.6 -1.7 5,6,7,8-tetrahydromethanopterin hydro-lyase compare
MPMX19_02613 -0.6 -1.7 hypothetical protein compare
MPMX19_02120 -0.6 -1.6 hypothetical protein compare
MPMX19_02862 -0.6 -2.6 hypothetical protein compare
MPMX19_03367 -0.6 -2.0 Magnetosome membrane protein 22 compare
MPMX19_00538 -0.6 -4.5 GTP 3',8-cyclase compare
MPMX19_00157 -0.6 -4.6 hypothetical protein compare
MPMX19_01481 -0.6 -4.2 Flagellar motor switch protein FliM compare
MPMX19_03499 -0.6 -1.7 Formate dehydrogenase, cytochrome b556(fdo) subunit compare
MPMX19_00140 -0.6 -3.4 hypothetical protein compare
MPMX19_00976 -0.6 -1.4 ATP-dependent RNA helicase RhlE compare
MPMX19_00237 -0.6 -2.0 Cysteine synthase compare
MPMX19_03959 -0.6 -1.2 hypothetical protein compare
MPMX19_04219 -0.6 -2.3 hypothetical protein compare
MPMX19_00366 -0.6 -1.9 hypothetical protein compare
MPMX19_03691 -0.6 -2.7 hypothetical protein compare
MPMX19_03976 -0.6 -2.5 hypothetical protein compare
MPMX19_06297 -0.6 -0.8 hypothetical protein compare
MPMX19_06449 -0.6 -1.7 hypothetical protein compare
MPMX19_01729 -0.6 -1.2 Ethylmalonyl-CoA/methylmalonyl-CoA epimerase compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in mixed community experiments

For mixed community Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum across organisms