Experiment set1S506 for Alteromonas macleodii MIT1002

Compare to:

Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 1

200 most important genes:

  gene name fitness t score description  
MIT1002_03690 -7.0 -13.5 DnaK suppressor protein compare
MIT1002_00843 -6.9 -4.8 hypothetical protein compare
MIT1002_03488 -5.1 -3.5 Na(+)-translocating NADH-quinone reductase subunit A compare
MIT1002_03979 -4.6 -2.0 Pullulanase secretion protein PulG compare
MIT1002_00115 -4.5 -2.3 Iron(III)-binding periplasmic protein compare
MIT1002_03805 -4.5 -2.8 hypothetical protein compare
MIT1002_04092 -4.5 -8.5 putative type I restriction enzymeP M protein compare
MIT1002_03982 -4.4 -2.9 PilD-dependent protein PddD compare
MIT1002_03981 -4.2 -2.1 Putative general secretion pathway protein I compare
MIT1002_01163 -4.2 -2.6 hypothetical protein compare
MIT1002_03978 -4.1 -4.9 General secretion pathway protein F compare
MIT1002_02406 -4.1 -2.8 6-phosphogluconolactonase compare
MIT1002_02035 -4.0 -2.2 Dihydroorotate dehydrogenase (quinone) compare
MIT1002_00883 -4.0 -5.5 putative transmembrane transcriptional regulator (anti-sigma factor) compare
MIT1002_04093 -3.9 -1.4 Type I restriction modification DNA specificity domain protein compare
MIT1002_03977 -3.9 -5.3 Type II traffic warden ATPase compare
MIT1002_03985 -3.8 -3.7 General secretion pathway protein M compare
MIT1002_01168 -3.8 -2.1 Flp pilus assembly protein TadD, contains TPR repeats compare
MIT1002_00521 -3.7 -6.3 N5-carboxyaminoimidazole ribonucleotide mutase compare
MIT1002_03984 -3.5 -2.4 General secretion pathway protein L compare
MIT1002_01295 -3.4 -4.5 Inner membrane protein YpjD compare
MIT1002_02993 -3.4 -5.6 D-3-phosphoglycerate dehydrogenase compare
MIT1002_00235 -3.3 -3.3 Glycogen synthase compare
MIT1002_03976 -3.3 -7.3 Pullulanase secretion envelope PulD compare
MIT1002_02188 -3.1 -4.1 Integration host factor subunit beta compare
MIT1002_00076 -3.1 -4.2 transcriptional regulator, y4mF family compare
MIT1002_01869 -3.1 -2.0 Preprotein translocase band 1 subunit compare
MIT1002_03983 -3.1 -5.4 Putative general secretion pathway protein K compare
MIT1002_03980 -3.1 -4.0 General secretion pathway protein H compare
MIT1002_00670 -3.0 -2.0 Outer membrane protein TolC precursor compare
MIT1002_03485 -3.0 -2.7 Na(+)-translocating NADH-quinone reductase subunit D compare
MIT1002_03487 -2.9 -4.5 Na(+)-translocating NADH-quinone reductase subunit B compare
MIT1002_00116 -2.9 -2.4 Spermidine/putrescine transport system permease protein PotB compare
MIT1002_01427 -2.8 -2.9 Tryptophan biosynthesis protein TrpCF compare
MIT1002_00012 -2.8 -3.9 Cytochrome c4 precursor compare
MIT1002_00486 -2.7 -1.2 Protein-export protein SecB compare
MIT1002_01430 -2.7 -6.8 Anthranilate synthase component 1 compare
MIT1002_01429 -2.6 -4.3 Anthranilate synthase component II compare
MIT1002_01435 -2.5 -2.3 Ribosomal large subunit pseudouridine synthase B compare
MIT1002_03130 -2.5 -5.7 2-methylcitrate synthase compare
MIT1002_03139 -2.4 -17.4 Glutamate synthase [NADPH] large chain precursor compare
MIT1002_04045 -2.4 -8.6 Ketol-acid reductoisomerase compare
MIT1002_00816 -2.4 -4.0 Cytochrome c1 precursor compare
MIT1002_02184 -2.4 -2.4 Orotidine 5'-phosphate decarboxylase compare
MIT1002_03486 -2.4 -3.0 Na(+)-translocating NADH-quinone reductase subunit C compare
MIT1002_01929 -2.3 -1.0 Trm112p-like protein compare
MIT1002_01011 -2.3 -5.6 Regulator of sigma E protease compare
MIT1002_03140 -2.3 -11.1 Glutamate synthase [NADPH] small chain compare
MIT1002_02708 -2.2 -7.1 Phosphoserine phosphatase compare
MIT1002_03084 -2.2 -9.1 Threonine synthase compare
MIT1002_02638 -2.2 -7.7 Imidazole glycerol phosphate synthase subunit HisF compare
MIT1002_03086 -2.1 -11.9 Aspartokinase I/homoserine dehydrogenase I compare
MIT1002_00814 -2.1 -3.9 Ubiquinol-cytochrome c reductase iron-sulfur subunit compare
MIT1002_00423 -2.0 -4.0 Aspartate carbamoyltransferase catalytic chain compare
MIT1002_04124 -2.0 -3.7 Glucose-inhibited division protein A compare
MIT1002_03484 -2.0 -1.8 Na(+)-translocating NADH-quinone reductase subunit E compare
MIT1002_01428 -2.0 -6.1 Anthranilate synthase component II compare
MIT1002_00752 -2.0 -2.6 Phosphate regulon sensor protein PhoR compare
MIT1002_01266 -1.9 -8.4 Asparagine synthetase B [glutamine-hydrolyzing] compare
MIT1002_00469 -1.9 -9.6 Ornithine carbamoyltransferase compare
MIT1002_00683 -1.9 -4.1 Elongation factor P--(R)-beta-lysine ligase compare
MIT1002_02760 -1.9 -2.6 ATP-dependent Clp protease proteolytic subunit precursor compare
MIT1002_00160 -1.8 -4.0 Diaminopimelate decarboxylase compare
MIT1002_02759 -1.8 -3.4 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MIT1002_02718 -1.8 -3.6 Sigma-E factor negative regulatory protein compare
MIT1002_00468 -1.8 -8.9 Argininosuccinate synthase compare
MIT1002_02633 -1.8 -8.8 Histidinol dehydrogenase compare
MIT1002_02573 -1.8 -5.1 hypothetical protein compare
MIT1002_02634 -1.8 -6.9 Histidinol-phosphate aminotransferase compare
MIT1002_00471 -1.8 -9.9 N-acetyl-gamma-glutamyl-phosphate reductase compare
MIT1002_00117 -1.8 -2.0 Maltose/maltodextrin import ATP-binding protein MalK compare
MIT1002_00485 -1.8 -6.5 Glycerol-3-phosphate dehydrogenase [NAD(P)+] compare
MIT1002_01467 -1.8 -9.7 Carbamoyl-phosphate synthase large chain compare
MIT1002_03062 -1.7 -3.4 Pyrroline-5-carboxylate reductase compare
MIT1002_02635 -1.7 -7.1 Histidine biosynthesis bifunctional protein HisB compare
MIT1002_02831 -1.7 -9.3 Isocitrate lyase compare
MIT1002_03055 -1.7 -4.5 Glutathione synthetase compare
MIT1002_02394 -1.7 -7.1 Glyceraldehyde-3-phosphate dehydrogenase compare
MIT1002_02639 -1.7 -6.1 Phosphoribosyl-ATP pyrophosphatase compare
MIT1002_01696 -1.7 -1.0 tRNA-Asp compare
MIT1002_00074 -1.7 -2.4 tRNA-Arg compare
MIT1002_00467 -1.7 -8.8 Argininosuccinate lyase compare
MIT1002_00470 -1.7 -7.2 Acetylglutamate kinase compare
MIT1002_00522 -1.7 -6.3 N5-carboxyaminoimidazole ribonucleotide synthase compare
MIT1002_04120 -1.6 -1.4 F0F1 ATP synthase subunit I compare
MIT1002_03058 -1.6 -1.5 hypothetical protein compare
MIT1002_03567 -1.6 -6.8 mycofactocin system glycosyltransferase compare
MIT1002_01979 -1.6 -6.9 Carnitinyl-CoA dehydratase compare
MIT1002_00946 -1.6 -5.9 3-isopropylmalate dehydratase small subunit 1 compare
MIT1002_01222 -1.6 -1.7 Glutamate--cysteine ligase compare
MIT1002_00377 -1.6 -6.6 Branched-chain-amino-acid aminotransferase 2 compare
MIT1002_00948 -1.6 -7.8 3-isopropylmalate dehydrogenase compare
MIT1002_02636 -1.6 -5.1 Imidazole glycerol phosphate synthase subunit HisH compare
MIT1002_04041 -1.6 -8.8 Dihydroxy-acid dehydratase compare
MIT1002_00947 -1.6 -7.2 3-isopropylmalate dehydratase large subunit compare
MIT1002_00111 -1.6 -3.9 ATP-dependent DNA helicase RecG compare
MIT1002_00503 -1.6 -8.5 Acetolactate synthase isozyme 3 large subunit compare
MIT1002_00410 -1.6 -2.0 hypothetical protein compare
MIT1002_00454 -1.5 -2.9 Penicillin-binding protein 1A compare
MIT1002_04036 -1.5 -3.2 LexA repressor compare
MIT1002_02637 -1.5 -4.5 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MIT1002_00949 -1.5 -8.5 2-isopropylmalate synthase compare
MIT1002_00466 -1.5 -7.2 Amino-acid acetyltransferase compare
MIT1002_02220 -1.5 -6.7 Phosphoribosylglycinamide formyltransferase compare
MIT1002_03628 -1.5 -2.3 Cold shock-like protein CspG compare
MIT1002_02833 -1.5 -8.8 Malate synthase G compare
MIT1002_03002 -1.4 -3.3 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex compare
MIT1002_03806 -1.4 -2.8 hypothetical protein compare
MIT1002_03581 -1.4 -5.3 Mannose-1-phosphate guanylyltransferase 1 compare
MIT1002_01638 -1.4 -2.6 Integration host factor subunit alpha compare
MIT1002_00437 -1.4 -7.1 Succinylornithine transaminase/acetylornithine aminotransferase compare
MIT1002_00070 -1.4 -1.1 Membrane fusogenic activity compare
MIT1002_03786 -1.4 -7.9 Modulator of FtsH protease HflK compare
MIT1002_01676 -1.4 -0.7 Exodeoxyribonuclease I compare
MIT1002_00504 -1.4 -5.8 Acetolactate synthase isozyme 3 small subunit compare
MIT1002_03516 -1.4 -6.6 Acetyl-coenzyme A synthetase compare
MIT1002_02133 -1.4 -2.1 putative integral membrane protein linked to a cation pump compare
MIT1002_03085 -1.4 -3.8 Homoserine kinase compare
MIT1002_01466 -1.3 -4.3 Carbamoyl-phosphate synthase small chain compare
MIT1002_02219 -1.3 -7.4 Phosphoribosylformylglycinamidine cyclo-ligase compare
MIT1002_03110 -1.3 -3.8 Carboxynorspermidine/carboxyspermidine decarboxylase compare
MIT1002_02429 -1.3 -6.1 Glucose-resistance amylase regulator compare
MIT1002_01112 -1.3 -4.4 Homoserine O-succinyltransferase compare
MIT1002_03658 -1.3 -3.7 putative zinc finger/helix-turn-helix protein, YgiT family compare
MIT1002_02286 -1.3 -5.2 Electron transfer flavoprotein large subunit compare
MIT1002_02810 -1.3 -4.7 preprotein translocase subunit SecF compare
MIT1002_01457 -1.3 -0.7 Heat shock protein 70 compare
MIT1002_00107 -1.3 -2.0 DNA-directed RNA polymerase subunit omega compare
MIT1002_02524 -1.3 -7.1 Amidophosphoribosyltransferase compare
MIT1002_03483 -1.3 -1.1 Na(+)-translocating NADH-quinone reductase subunit F compare
MIT1002_02404 -1.3 -3.7 Glucokinase compare
MIT1002_02682 -1.3 -4.1 Sigma-W factor compare
MIT1002_02832 -1.3 -4.5 Nodulation protein D 2 compare
MIT1002_03546 -1.3 -2.1 5S ribosomal RNA compare
MIT1002_00161 -1.3 -2.2 putative small periplasmic lipoprotein compare
MIT1002_03179 -1.3 -6.1 Cystathionine beta-lyase PatB compare
MIT1002_01345 -1.2 -1.3 tRNA-Ser compare
MIT1002_02632 -1.2 -4.6 ATP phosphoribosyltransferase compare
MIT1002_03785 -1.2 -6.3 Modulator of FtsH protease HflC compare
MIT1002_03957 -1.2 -3.4 putative tRNA-dihydrouridine synthase compare
MIT1002_01027 -1.2 -9.7 Phosphoribosylformylglycinamidine synthase compare
MIT1002_03096 -1.2 -5.9 Isocitrate dehydrogenase kinase/phosphatase compare
MIT1002_04145 -1.2 -2.0 hypothetical protein compare
MIT1002_00932 -1.2 -1.6 holin-like protein compare
MIT1002_02041 -1.2 -1.6 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase compare
MIT1002_02525 -1.2 -3.0 Pur regulon 18 kDa protein compare
MIT1002_00100 -1.2 -5.7 Putative uroporphyrinogen-III C-methyltransferase compare
MIT1002_02130 -1.1 -1.0 cbb3-type cytochrome c oxidase subunit II compare
MIT1002_03215 -1.1 -2.2 putative ATP-binding protein involved in virulence compare
MIT1002_02543 -1.1 -1.1 hypothetical protein compare
MIT1002_01143 -1.1 -2.8 Phage shock protein A compare
MIT1002_02266 -1.1 -4.5 Methionine gamma-lyase compare
MIT1002_03317 -1.1 -2.9 Transcriptional regulatory protein DevR (DosR) compare
MIT1002_04040 -1.1 -6.7 L-threonine dehydratase biosynthetic IlvA compare
MIT1002_00436 -1.1 -2.7 Arginine N-succinyltransferase subunit beta compare
MIT1002_03906 -1.1 -2.7 hypothetical protein compare
MIT1002_03371 -1.1 -1.8 HTH-type transcriptional repressor FabR compare
MIT1002_03539 -1.1 -1.8 Bifunctional protein BirA compare
MIT1002_04050 -1.1 -1.2 hypothetical protein compare
MIT1002_02677 -1.1 -7.8 Heat shock protein F84.1 compare
MIT1002_02372 -1.1 -1.1 Biofilm growth-associated repressor compare
MIT1002_03423 -1.1 -1.0 hypothetical protein compare
MIT1002_01035 -1.1 -2.9 anti-sigma28 factor FlgM compare
MIT1002_00114 -1.1 -1.3 hypothetical protein compare
MIT1002_01497 -1.1 -0.7 tRNA-Met compare
MIT1002_03114 -1.1 -2.3 Lipoprotein activator of PBP from the outer membrane A compare
MIT1002_00032 -1.1 -1.2 16S ribosomal RNA compare
MIT1002_00602 -1.1 -1.3 hypothetical protein compare
MIT1002_02812 -1.0 -2.2 preprotein translocase subunit YajC compare
MIT1002_02211 -1.0 -5.1 TPR repeat-containing protein YfgC precursor compare
MIT1002_01917 -1.0 -1.3 hypothetical protein compare
MIT1002_00884 -1.0 -1.2 hypothetical protein compare
MIT1002_00955 -1.0 -2.3 Recombinase A compare
MIT1002_01885 -1.0 -4.5 Gamma-glutamyl phosphate reductase compare
MIT1002_02129 -1.0 -2.4 hypothetical protein compare
MIT1002_00933 -1.0 -4.7 Inner membrane protein YohK compare
MIT1002_01263 -1.0 -3.0 7-cyano-7-deazaguanine synthase compare
MIT1002_02407 -1.0 -1.4 Glucose-6-phosphate 1-dehydrogenase compare
MIT1002_03742 -1.0 -2.2 tRNA-Trp compare
MIT1002_03961 -1.0 -6.4 Phosphoribosylamine--glycine ligase compare
MIT1002_03771 -1.0 -2.9 N-acetylglucosamine repressor compare
MIT1002_01316 -1.0 -4.7 P-protein compare
MIT1002_02381 -1.0 -1.3 hypothetical protein compare
MIT1002_00575 -1.0 -6.3 Fatty acid oxidation complex subunit alpha compare
MIT1002_03188 -1.0 -2.4 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
MIT1002_01351 -1.0 -2.3 putative enzyme related to lactoylglutathione lyase compare
MIT1002_02031 -1.0 -5.8 hypothetical protein compare
MIT1002_03698 -1.0 -3.1 tRNA (guanine-N(7)-)-methyltransferase compare
MIT1002_03034 -1.0 -2.6 cell division protein MraZ compare
MIT1002_00398 -1.0 -1.1 hypothetical protein compare
MIT1002_03843 -1.0 -3.1 Galactose operon repressor compare
MIT1002_01464 -1.0 -3.3 Ni/Fe-hydrogenase, b-type cytochrome subunit compare
MIT1002_03623 -0.9 -5.2 hypothetical protein compare
MIT1002_02390 -0.9 -2.0 hypothetical protein compare
MIT1002_02042 -0.9 -2.1 hypothetical protein compare
MIT1002_02785 -0.9 -3.4 Outer membrane protein assembly factor BamB precursor compare
MIT1002_00242 -0.9 -1.6 hypothetical protein compare
MIT1002_03408 -0.9 -0.8 hypothetical protein compare
MIT1002_03965 -0.9 -4.8 Phosphoribulokinase, plasmid compare
MIT1002_03318 -0.9 -5.3 Sensor protein EvgS precursor compare


Specific Phenotypes

None in this experiment

For Alteromonas macleodii MIT1002 in mixed community experiments

For mixed community Mixed culture; Prochlorococcus marinus str. MED4 10:1 starting OD to HP15 across organisms