Experiment set1S505 for Paraburkholderia sabiae LMG 24235
D-Glucose carbon source
Group: carbon sourceMedia: AB_minimal medium + D-Glucose (20 mM)
Culturing: Psabiae_ML3b, tube, Aerobic, at 30 (C), shaken=180 rpm
By: Marta Torres on 12/5/24
Specific Phenotypes
For 7 genes in this experiment
For carbon source D-Glucose in Paraburkholderia sabiae LMG 24235
For carbon source D-Glucose across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Chitin and N-acetylglucosamine utilization | 2 |
| Entner-Doudoroff Pathway | 1 |
| Glycerol and Glycerol-3-phosphate Uptake and Utilization | 1 |
| Pentose phosphate pathway | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Pentose phosphate pathway
- Biosynthesis of alkaloids derived from histidine and purine
- Biosynthesis of plant hormones
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| pentose phosphate pathway (oxidative branch) I | 3 | 3 | 1 |
| formaldehyde oxidation I | 6 | 3 | 1 |
| pentose phosphate pathway | 8 | 8 | 1 |
| Entner-Doudoroff pathway I | 9 | 9 | 1 |
| superpathway of glucose and xylose degradation | 17 | 17 | 1 |
| superpathway of glycolysis and the Entner-Doudoroff pathway | 17 | 15 | 1 |
| heterolactic fermentation | 18 | 16 | 1 |