Experiment set1S50 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum

200 most important genes:

  gene name fitness t score description  
MPMX19_03906 -4.9 -14.3 Pca regulon regulatory protein compare
MPMX19_01955 -3.2 -3.1 Putative anti-sigma factor antagonist compare
MPMX19_06547 -3.1 -9.0 hypothetical protein compare
MPMX19_05680 -3.0 -4.9 Cell cycle response regulator CtrA compare
MPMX19_01495 -2.8 -3.1 hypothetical protein compare
MPMX19_04087 -2.6 -4.7 Flagellum site-determining protein YlxH compare
MPMX19_00862 -2.4 -11.4 hypothetical protein compare
MPMX19_04092 -2.4 -8.9 Flagellar motor switch protein FliN compare
MPMX19_01054 -2.4 -7.0 Aspartate carbamoyltransferase compare
MPMX19_00705 -2.3 -3.8 Cell division coordinator CpoB compare
MPMX19_04112 -2.3 -3.7 hypothetical protein compare
MPMX19_00126 -2.3 -4.2 hypothetical protein compare
MPMX19_05678 -2.3 -8.0 hypothetical protein compare
MPMX19_02267 -2.2 -1.5 hypothetical protein compare
MPMX19_01483 -2.2 -12.6 Flagellar basal-body rod protein FlgG compare
MPMX19_00128 -2.1 -12.8 hypothetical protein compare
MPMX19_05679 -2.1 -11.7 Flagellum-specific ATP synthase compare
MPMX19_02657 -2.1 -16.8 Glutamate synthase [NADPH] large chain compare
MPMX19_03724 -2.1 -2.8 hypothetical protein compare
MPMX19_04114 -2.1 -3.3 hypothetical protein compare
MPMX19_00858 -2.1 -6.6 Flagellar biosynthetic protein FliP compare
MPMX19_01497 -2.0 -4.9 hypothetical protein compare
MPMX19_06985 -2.0 -3.2 L-malyl-CoA/beta-methylmalyl-CoA lyase compare
MPMX19_05023 -2.0 -2.6 hypothetical protein compare
MPMX19_00867 -2.0 -13.4 Flagellar biosynthetic protein FlhB compare
MPMX19_00863 -1.9 -8.5 Flagellar basal-body rod protein FlgC compare
MPMX19_02658 -1.9 -12.2 Glutamate synthase [NADPH] small chain compare
MPMX19_00838 -1.9 -3.5 GTP pyrophosphokinase rsh compare
MPMX19_04094 -1.8 -10.3 Flagellar M-ring protein compare
MPMX19_00530 -1.8 -4.0 Orotate phosphoribosyltransferase compare
MPMX19_04863 -1.8 -2.4 Transcriptional regulatory protein LnrK compare
MPMX19_00714 -1.8 -7.7 Ferrous-iron efflux pump FieF compare
MPMX19_02674 -1.7 -2.3 NADH:quinone reductase compare
MPMX19_01484 -1.7 -7.5 Flagellar basal-body rod protein FlgG compare
MPMX19_01075 -1.7 -2.7 Molybdopterin synthase sulfur carrier subunit compare
MPMX19_01243 -1.7 -2.5 hypothetical protein compare
MPMX19_04000 -1.7 -3.8 Flagellar motor switch protein FliG compare
MPMX19_01834 -1.7 -2.5 hypothetical protein compare
MPMX19_03635 -1.7 -1.6 DNA-binding transcriptional activator DecR compare
MPMX19_02980 -1.7 -1.8 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_00866 -1.6 -7.9 Flagellar biosynthetic protein FliR compare
MPMX19_00311 -1.5 -12.4 hypothetical protein compare
MPMX19_04222 -1.5 -10.9 hypothetical protein compare
MPMX19_00503 -1.4 -4.6 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MPMX19_05387 -1.4 -2.4 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
MPMX19_04089 -1.4 -10.0 Flagellar biosynthesis protein FlhA compare
MPMX19_01630 -1.4 -4.1 Phosphoribosylamine--glycine ligase compare
MPMX19_00854 -1.4 -11.8 hypothetical protein compare
MPMX19_00304 -1.4 -3.1 Phosphatidylcholine synthase compare
MPMX19_06880 -1.4 -2.3 Validamycin A dioxygenase compare
MPMX19_04554 -1.4 -4.0 Response regulator PleD compare
MPMX19_02981 -1.4 -4.8 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_00841 -1.4 -2.3 Holo-[acyl-carrier-protein] synthase compare
MPMX19_06914 -1.3 -1.8 Acyl-CoA dehydrogenase FadE27 compare
MPMX19_04390 -1.3 -2.9 hypothetical protein compare
MPMX19_06644 -1.3 -10.5 GDP-mannose 4,6-dehydratase compare
MPMX19_04205 -1.3 -3.6 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_04948 -1.3 -2.1 HTH-type transcriptional regulator GltR compare
MPMX19_00020 -1.2 -2.0 hypothetical protein compare
MPMX19_01577 -1.2 -3.7 hypothetical protein compare
MPMX19_02207 -1.2 -2.8 N-(5'-phosphoribosyl)anthranilate isomerase compare
MPMX19_00864 -1.2 -3.8 Flagellar hook-basal body complex protein FliE compare
MPMX19_05906 -1.2 -2.1 hypothetical protein compare
MPMX19_03722 -1.2 -2.0 hypothetical protein compare
MPMX19_04200 -1.2 -6.4 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase compare
MPMX19_03450 -1.2 -1.2 hypothetical protein compare
MPMX19_02543 -1.2 -2.2 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_00794 -1.1 -3.4 Transcriptional activator protein CopR compare
MPMX19_06734 -1.1 -9.4 Alginate biosynthesis protein AlgA compare
MPMX19_02268 -1.1 -3.1 hypothetical protein compare
MPMX19_01113 -1.1 -2.4 Adaptive-response sensory-kinase SasA compare
MPMX19_01718 -1.1 -1.9 Ribosomal large subunit pseudouridine synthase C compare
MPMX19_04171 -1.1 -2.0 16S ribosomal RNA compare
MPMX19_03169 -1.1 -2.0 Dihydroanticapsin 7-dehydrogenase compare
MPMX19_05605 -1.1 -2.7 hypothetical protein compare
MPMX19_00887 -1.1 -1.6 hypothetical protein compare
MPMX19_01304 -1.1 -6.6 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_04093 -1.1 -3.3 hypothetical protein compare
MPMX19_02675 -1.1 -8.0 Phosphoenolpyruvate-dependent phosphotransferase system compare
MPMX19_01883 -1.1 -4.9 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_00976 -1.0 -2.0 ATP-dependent RNA helicase RhlE compare
MPMX19_05727 -1.0 -5.2 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_00182 -1.0 -2.2 hypothetical protein compare
MPMX19_04206 -1.0 -3.9 3-oxoacyl-[acyl-carrier-protein] synthase 3 compare
MPMX19_03634 -1.0 -2.7 Arginase compare
MPMX19_01485 -1.0 -6.7 hypothetical protein compare
MPMX19_00094 -1.0 -2.4 hypothetical protein compare
MPMX19_01496 -1.0 -4.7 hypothetical protein compare
MPMX19_00906 -1.0 -7.2 Amidophosphoribosyltransferase compare
MPMX19_01822 -1.0 -4.5 2-isopropylmalate synthase compare
MPMX19_04208 -1.0 -3.1 flagellum biosynthesis repressor protein FlbT compare
MPMX19_05044 -1.0 -1.9 hypothetical protein compare
MPMX19_06577 -1.0 -6.0 hypothetical protein compare
MPMX19_01201 -1.0 -2.6 hypothetical protein compare
MPMX19_03295 -1.0 -2.3 HTH-type transcriptional regulator McbR compare
MPMX19_06785 -1.0 -1.5 L-idonate 5-dehydrogenase (NAD(P)(+)) compare
MPMX19_05714 -1.0 -5.2 hypothetical protein compare
MPMX19_05831 -1.0 -2.7 Protein/nucleic acid deglycase 2 compare
MPMX19_06322 -1.0 -2.0 hypothetical protein compare
MPMX19_05235 -0.9 -2.9 HTH-type transcriptional regulator BetI compare
MPMX19_01053 -0.9 -2.8 Dihydroorotase compare
MPMX19_05773 -0.9 -2.8 Putative 1,2-phenylacetyl-CoA epoxidase, subunit D compare
MPMX19_01249 -0.9 -1.4 Periplasmic serine endoprotease DegP compare
MPMX19_03196 -0.9 -2.8 hypothetical protein compare
MPMX19_01597 -0.9 -1.7 23S rRNA (uridine(2479)-2'-O)-methyltransferase compare
MPMX19_06544 -0.9 -6.9 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) compare
MPMX19_04199 -0.9 -4.7 Pseudaminic acid synthase compare
MPMX19_00129 -0.9 -1.2 hypothetical protein compare
MPMX19_00262 -0.9 -1.7 Thiazole synthase compare
MPMX19_00860 -0.9 -2.5 hypothetical protein compare
MPMX19_04218 -0.9 -4.1 Protein phosphatase PrpC compare
MPMX19_02737 -0.9 -3.8 Tryptophan synthase alpha chain compare
MPMX19_01085 -0.9 -3.8 hypothetical protein compare
MPMX19_02736 -0.9 -5.7 Tryptophan synthase beta chain compare
MPMX19_06545 -0.9 -7.3 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase compare
MPMX19_05119 -0.9 -6.2 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_01084 -0.9 -2.9 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_06090 -0.9 -1.8 Pyruvate dehydrogenase complex repressor compare
MPMX19_03558 -0.9 -2.3 hypothetical protein compare
MPMX19_04958 -0.9 -2.1 Methyl-accepting chemotaxis protein compare
MPMX19_00680 -0.9 -1.9 Elongation factor P--(R)-beta-lysine ligase compare
MPMX19_05361 -0.9 -4.1 CRP-like cAMP-activated global transcriptional regulator compare
MPMX19_05388 -0.9 -2.7 Leucine-responsive regulatory protein compare
MPMX19_00904 -0.9 -4.9 DNA repair protein RadA compare
MPMX19_03654 -0.8 -2.2 Fructokinase compare
MPMX19_06211 -0.8 -1.8 tRNA-Ala compare
MPMX19_04362 -0.8 -1.4 Cytidine deaminase compare
MPMX19_01494 -0.8 -4.8 Flagellar P-ring protein compare
MPMX19_02177 -0.8 -2.3 Succinylornithine transaminase/acetylornithine aminotransferase compare
MPMX19_00145 -0.8 -3.8 DNA adenine methyltransferase YhdJ compare
MPMX19_04985 -0.8 -1.5 HTH-type transcriptional regulator DmlR compare
MPMX19_00846 -0.8 -1.4 hypothetical protein compare
MPMX19_00609 -0.8 -2.3 Chemotaxis protein CheY compare
MPMX19_01400 -0.8 -1.9 hypothetical protein compare
MPMX19_01454 -0.8 -1.8 hypothetical protein compare
MPMX19_01014 -0.8 -3.2 Indole-3-glycerol phosphate synthase compare
MPMX19_03035 -0.8 -2.2 Protein YceI compare
MPMX19_03976 -0.8 -3.1 hypothetical protein compare
MPMX19_06179 -0.8 -1.2 putative SURF1-like protein compare
MPMX19_06819 -0.8 -1.4 hypothetical protein compare
MPMX19_00544 -0.8 -1.4 hypothetical protein compare
MPMX19_06422 -0.8 -2.5 hypothetical protein compare
MPMX19_06824 -0.8 -2.6 Flavin-dependent trigonelline monooxygenase, reductase component compare
MPMX19_06581 -0.8 -5.2 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 2 compare
MPMX19_06580 -0.8 -3.8 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_06743 -0.8 -2.2 Chemotaxis protein CheA compare
MPMX19_01796 -0.8 -1.3 hypothetical protein compare
MPMX19_06460 -0.8 -1.9 DNA-invertase hin compare
MPMX19_04204 -0.8 -4.6 D-alanine--D-alanyl carrier protein ligase compare
MPMX19_03197 -0.8 -1.6 hypothetical protein compare
MPMX19_01203 -0.7 -2.0 hypothetical protein compare
MPMX19_04115 -0.7 -1.0 Sensor histidine kinase RcsC compare
MPMX19_02806 -0.7 -1.3 HTH-type transcriptional regulator DmlR compare
MPMX19_01884 -0.7 -1.6 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_05070 -0.7 -3.3 hypothetical protein compare
MPMX19_05458 -0.7 -1.9 hypothetical protein compare
MPMX19_02392 -0.7 -5.9 Aspartate/prephenate aminotransferase compare
MPMX19_04623 -0.7 -3.1 hypothetical protein compare
MPMX19_06014 -0.7 -3.7 Histidinol-phosphate aminotransferase compare
MPMX19_04466 -0.7 -1.4 hypothetical protein compare
MPMX19_01998 -0.7 -3.2 3-isopropylmalate dehydratase large subunit compare
MPMX19_01545 -0.7 -1.1 Lon protease compare
MPMX19_05144 -0.7 -1.3 hypothetical protein compare
MPMX19_05442 -0.7 -1.8 Ribosomal large subunit pseudouridine synthase D compare
MPMX19_02876 -0.7 -2.4 hypothetical protein compare
MPMX19_01560 -0.7 -1.5 3'-5' exonuclease DinG compare
MPMX19_01645 -0.7 -1.3 HTH-type transcriptional regulator GltC compare
MPMX19_00142 -0.7 -1.4 hypothetical protein compare
MPMX19_05452 -0.7 -1.8 hypothetical protein compare
MPMX19_01486 -0.7 -4.2 Flagellar L-ring protein compare
MPMX19_03198 -0.7 -2.4 hypothetical protein compare
MPMX19_03491 -0.7 -1.3 putative FAD-linked oxidoreductase compare
MPMX19_05472 -0.7 -2.2 hypothetical protein compare
MPMX19_02979 -0.7 -2.7 Hydrogen cyanide synthase subunit HcnB compare
MPMX19_03859 -0.7 -1.4 hypothetical protein compare
MPMX19_04951 -0.7 -4.4 hypothetical protein compare
MPMX19_03157 -0.7 -1.3 hypothetical protein compare
MPMX19_03790 -0.7 -1.6 hypothetical protein compare
MPMX19_06306 -0.7 -2.5 hypothetical protein compare
MPMX19_04622 -0.7 -3.9 hypothetical protein compare
MPMX19_03586 -0.7 -1.6 HTH-type transcriptional repressor ComR compare
MPMX19_03096 -0.6 -1.0 hypothetical protein compare
MPMX19_06455 -0.6 -2.6 Tyrosine recombinase XerC compare
MPMX19_05982 -0.6 -1.0 hypothetical protein compare
MPMX19_06271 -0.6 -4.5 hypothetical protein compare
MPMX19_04696 -0.6 -1.9 Na(+)/H(+) antiporter subunit C1 compare
MPMX19_03756 -0.6 -1.5 hypothetical protein compare
MPMX19_06044 -0.6 -0.9 hypothetical protein compare
MPMX19_00572 -0.6 -2.2 Type-4 uracil-DNA glycosylase compare
MPMX19_06508 -0.6 -1.7 Nitrilotriacetate monooxygenase component A compare
MPMX19_02772 -0.6 -1.5 N-acetylcysteine deacetylase compare
MPMX19_01487 -0.6 -1.5 hypothetical protein compare
MPMX19_04956 -0.6 -3.1 5-oxoprolinase subunit B compare
MPMX19_01015 -0.6 -2.4 Anthranilate phosphoribosyltransferase compare
MPMX19_03803 -0.6 -1.5 hypothetical protein compare
MPMX19_02965 -0.6 -2.4 hypothetical protein compare
MPMX19_04430 -0.6 -1.5 hypothetical protein compare
MPMX19_01493 -0.6 -1.4 Flagellar assembly protein FliX compare
MPMX19_06253 -0.6 -1.5 hypothetical protein compare
MPMX19_01777 -0.6 -1.9 2-aminoadipate transaminase compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in mixed community experiments

For mixed community Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum across organisms