Experiment set1S495 for Alteromonas macleodii MIT1002

Compare to:

monoculture; Experiment C, time point 1

200 most important genes:

  gene name fitness t score description  
MIT1002_02348 -7.7 -5.4 hypothetical protein compare
MIT1002_00471 -7.7 -5.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
MIT1002_00948 -7.6 -5.3 3-isopropylmalate dehydrogenase compare
MIT1002_01027 -7.5 -7.3 Phosphoribosylformylglycinamidine synthase compare
MIT1002_00504 -7.5 -7.3 Acetolactate synthase isozyme 3 small subunit compare
MIT1002_02524 -7.5 -5.2 Amidophosphoribosyltransferase compare
MIT1002_00949 -7.5 -5.2 2-isopropylmalate synthase compare
MIT1002_02636 -7.5 -5.2 Imidazole glycerol phosphate synthase subunit HisH compare
MIT1002_00946 -7.4 -5.1 3-isopropylmalate dehydratase small subunit 1 compare
MIT1002_00469 -7.4 -5.1 Ornithine carbamoyltransferase compare
MIT1002_01112 -7.3 -5.0 Homoserine O-succinyltransferase compare
MIT1002_03139 -7.2 -8.6 Glutamate synthase [NADPH] large chain precursor compare
MIT1002_03690 -7.2 -9.9 DnaK suppressor protein compare
MIT1002_02220 -7.2 -5.0 Phosphoribosylglycinamide formyltransferase compare
MIT1002_00377 -7.2 -5.0 Branched-chain-amino-acid aminotransferase 2 compare
MIT1002_00522 -7.2 -5.0 N5-carboxyaminoimidazole ribonucleotide synthase compare
MIT1002_01119 -7.1 -4.9 HTH-type transcriptional regulator GltC compare
MIT1002_03086 -7.1 -4.9 Aspartokinase I/homoserine dehydrogenase I compare
MIT1002_04040 -7.1 -6.9 L-threonine dehydratase biosynthetic IlvA compare
MIT1002_03015 -7.0 -4.9 aspartoacylase compare
MIT1002_02219 -7.0 -6.9 Phosphoribosylformylglycinamidine cyclo-ligase compare
MIT1002_02349 -7.0 -4.9 2-hydroxypropyl-CoM lyase compare
MIT1002_01266 -7.0 -4.9 Asparagine synthetase B [glutamine-hydrolyzing] compare
MIT1002_00467 -7.0 -4.8 Argininosuccinate lyase compare
MIT1002_00947 -7.0 -4.8 3-isopropylmalate dehydratase large subunit compare
MIT1002_03961 -7.0 -8.3 Phosphoribosylamine--glycine ligase compare
MIT1002_02639 -6.9 -4.8 Phosphoribosyl-ATP pyrophosphatase compare
MIT1002_02993 -6.9 -4.8 D-3-phosphoglycerate dehydrogenase compare
MIT1002_02266 -6.9 -4.8 Methionine gamma-lyase compare
MIT1002_04044 -6.9 -4.8 HTH-type transcriptional regulator GltC compare
MIT1002_00466 -6.8 -4.7 Amino-acid acetyltransferase compare
MIT1002_03179 -6.8 -8.1 Cystathionine beta-lyase PatB compare
MIT1002_03140 -6.8 -4.7 Glutamate synthase [NADPH] small chain compare
MIT1002_02634 -6.8 -4.7 Histidinol-phosphate aminotransferase compare
MIT1002_02633 -6.8 -4.7 Histidinol dehydrogenase compare
MIT1002_04045 -6.8 -9.3 Ketol-acid reductoisomerase compare
MIT1002_02635 -6.7 -4.7 Histidine biosynthesis bifunctional protein HisB compare
MIT1002_03539 -6.7 -3.2 Bifunctional protein BirA compare
MIT1002_00468 -6.7 -6.5 Argininosuccinate synthase compare
MIT1002_02702 -6.7 -6.5 Serine hydroxymethyltransferase compare
MIT1002_01379 -6.7 -6.5 Biotin synthase compare
MIT1002_02638 -6.6 -6.5 Imidazole glycerol phosphate synthase subunit HisF compare
MIT1002_01466 -6.6 -4.6 Carbamoyl-phosphate synthase small chain compare
MIT1002_04041 -6.6 -6.5 Dihydroxy-acid dehydratase compare
MIT1002_02708 -6.6 -4.6 Phosphoserine phosphatase compare
MIT1002_00503 -6.6 -4.5 Acetolactate synthase isozyme 3 large subunit compare
MIT1002_03084 -6.6 -4.5 Threonine synthase compare
MIT1002_01467 -6.6 -4.5 Carbamoyl-phosphate synthase large chain compare
MIT1002_00160 -6.5 -4.5 Diaminopimelate decarboxylase compare
MIT1002_00161 -6.4 -4.2 putative small periplasmic lipoprotein compare
MIT1002_03062 -6.4 -4.4 Pyrroline-5-carboxylate reductase compare
MIT1002_01885 -6.4 -4.4 Gamma-glutamyl phosphate reductase compare
MIT1002_02637 -6.3 -4.4 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MIT1002_01429 -6.3 -4.4 Anthranilate synthase component II compare
MIT1002_01428 -6.3 -4.4 Anthranilate synthase component II compare
MIT1002_03085 -6.2 -4.3 Homoserine kinase compare
MIT1002_00437 -6.0 -5.9 Succinylornithine transaminase/acetylornithine aminotransferase compare
MIT1002_01430 -5.8 -4.0 Anthranilate synthase component 1 compare
MIT1002_03186 -5.7 -6.8 Nitrogen regulation protein NR(I) compare
MIT1002_01129 -5.7 -3.4 Carbon storage regulator compare
MIT1002_02008 -5.6 -12.2 Para-aminobenzoate synthase component 1 compare
MIT1002_01380 -5.6 -13.0 8-amino-7-oxononanoate synthase compare
MIT1002_02632 -5.6 -3.8 ATP phosphoribosyltransferase compare
MIT1002_01378 -5.6 -12.4 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
MIT1002_03616 -5.4 -3.7 NAD(P)H-flavin reductase compare
MIT1002_01736 -5.4 -15.2 Aminodeoxychorismate lyase compare
MIT1002_00423 -5.3 -3.7 Aspartate carbamoyltransferase catalytic chain compare
MIT1002_01316 -5.3 -8.9 P-protein compare
MIT1002_01382 -5.3 -12.5 ATP-dependent dethiobiotin synthetase BioD 1 compare
MIT1002_00439 -5.3 -12.8 Para-aminobenzoate synthase glutamine amidotransferase component II compare
MIT1002_04092 -5.2 -3.6 putative type I restriction enzymeP M protein compare
MIT1002_01427 -5.2 -3.4 Tryptophan biosynthesis protein TrpCF compare
MIT1002_00827 -5.2 -3.3 RNA polymerase sigma-54 factor 2 compare
MIT1002_02184 -5.0 -2.7 Orotidine 5'-phosphate decarboxylase compare
MIT1002_00470 -5.0 -7.3 Acetylglutamate kinase compare
MIT1002_02035 -5.0 -2.3 Dihydroorotate dehydrogenase (quinone) compare
MIT1002_03331 -4.8 -8.7 D-lactate dehydrogenase compare
MIT1002_00068 -4.8 -7.2 Chorismate--pyruvate lyase compare
MIT1002_02130 -4.8 -2.6 cbb3-type cytochrome c oxidase subunit II compare
MIT1002_01345 -4.7 -2.6 tRNA-Ser compare
MIT1002_00235 -4.7 -3.1 Glycogen synthase compare
MIT1002_01001 -4.6 -9.9 PII uridylyl-transferase compare
MIT1002_00094 -4.6 -1.3 sulfur carrier protein ThiS compare
MIT1002_01381 -4.5 -10.6 Malonyl-CoA O-methyltransferase BioC compare
MIT1002_00521 -4.4 -4.7 N5-carboxyaminoimidazole ribonucleotide mutase compare
MIT1002_03978 -4.3 -3.0 General secretion pathway protein F compare
MIT1002_02538 -4.3 -2.4 3-oxoacyl-[acyl-carrier-protein] synthase 1 compare
MIT1002_02306 -4.3 -7.6 Glutamate-pyruvate aminotransferase AlaA compare
MIT1002_03979 -4.2 -2.0 Pullulanase secretion protein PulG compare
MIT1002_02759 -4.2 -5.0 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MIT1002_03484 -4.2 -2.3 Na(+)-translocating NADH-quinone reductase subunit E compare
MIT1002_03977 -4.2 -2.9 Type II traffic warden ATPase compare
MIT1002_01676 -4.2 -1.1 Exodeoxyribonuclease I compare
MIT1002_00115 -4.1 -2.2 Iron(III)-binding periplasmic protein compare
MIT1002_03481 -4.1 -3.3 hypothetical protein compare
MIT1002_03002 -4.1 -4.0 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex compare
MIT1002_03980 -4.0 -2.8 General secretion pathway protein H compare
MIT1002_03982 -4.0 -2.8 PilD-dependent protein PddD compare
MIT1002_00114 -3.9 -2.4 hypothetical protein compare
MIT1002_03981 -3.8 -2.0 Putative general secretion pathway protein I compare
MIT1002_02406 -3.8 -2.6 6-phosphogluconolactonase compare
MIT1002_00117 -3.8 -2.5 Maltose/maltodextrin import ATP-binding protein MalK compare
MIT1002_03976 -3.8 -2.6 Pullulanase secretion envelope PulD compare
MIT1002_00781 -3.7 -3.1 Ribosomal RNA small subunit methyltransferase A compare
MIT1002_00097 -3.7 -20.6 Phosphomethylpyrimidine synthase compare
MIT1002_03055 -3.6 -5.0 Glutathione synthetase compare
MIT1002_03983 -3.6 -2.5 Putative general secretion pathway protein K compare
MIT1002_04093 -3.6 -1.4 Type I restriction modification DNA specificity domain protein compare
MIT1002_03185 -3.6 -10.9 Nitrogen regulation protein NR(II) compare
MIT1002_03985 -3.6 -3.5 General secretion pathway protein M compare
MIT1002_00093 -3.6 -12.5 Thiazole synthase compare
MIT1002_00092 -3.5 -11.4 2-iminoacetate synthase compare
MIT1002_01352 -3.5 -11.5 Aspartate-semialdehyde dehydrogenase compare
MIT1002_00404 -3.5 -9.2 Formyltetrahydrofolate deformylase compare
MIT1002_00096 -3.5 -15.7 Thiamine-phosphate synthase compare
MIT1002_00673 -3.4 -8.2 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA compare
MIT1002_01435 -3.4 -2.0 Ribosomal large subunit pseudouridine synthase B compare
MIT1002_03137 -3.3 -8.0 Aerobic respiration control sensor protein ArcB compare
MIT1002_00761 -3.3 -8.2 transport protein TonB compare
MIT1002_02807 -3.3 -4.3 Inositol-1-monophosphatase compare
MIT1002_01981 -3.3 -11.5 Inner membrane protein YejM compare
MIT1002_02132 -3.3 -2.8 Cytochrome c oxidase subunit III compare
MIT1002_02129 -3.3 -6.2 hypothetical protein compare
MIT1002_03788 -3.2 -3.6 Host factor-I protein compare
MIT1002_03483 -3.2 -2.1 Na(+)-translocating NADH-quinone reductase subunit F compare
MIT1002_01217 -3.2 -5.3 2-dehydropantoate 2-reductase compare
MIT1002_03984 -3.2 -2.2 General secretion pathway protein L compare
MIT1002_00074 -3.2 -2.9 tRNA-Arg compare
MIT1002_00752 -3.1 -3.0 Phosphate regulon sensor protein PhoR compare
MIT1002_00076 -3.1 -3.4 transcriptional regulator, y4mF family compare
MIT1002_00760 -3.1 -2.5 Biopolymer transport protein ExbD compare
MIT1002_00116 -3.1 -2.0 Spermidine/putrescine transport system permease protein PotB compare
MIT1002_01533 -3.1 -4.7 Negative modulator of initiation of replication compare
MIT1002_04036 -3.0 -3.0 LexA repressor compare
MIT1002_00095 -3.0 -9.6 Molybdopterin-synthase adenylyltransferase compare
MIT1002_02581 -2.9 -4.4 Disulfide oxidoreductase compare
MIT1002_04124 -2.9 -2.0 Glucose-inhibited division protein A compare
MIT1002_00759 -2.9 -5.1 protein TolQ compare
MIT1002_00109 -2.9 -9.5 Putative reactive intermediate deaminase TdcF compare
MIT1002_01168 -2.8 -2.1 Flp pilus assembly protein TadD, contains TPR repeats compare
MIT1002_02128 -2.8 -2.9 hypothetical protein compare
MIT1002_02133 -2.8 -3.6 putative integral membrane protein linked to a cation pump compare
MIT1002_02041 -2.8 -2.4 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase compare
MIT1002_02407 -2.8 -4.2 Glucose-6-phosphate 1-dehydrogenase compare
MIT1002_03491 -2.7 -16.5 Phosphoenolpyruvate carboxylase compare
MIT1002_00233 -2.7 -4.0 Dye resistance protein compare
MIT1002_03330 -2.7 -8.4 L-lactate dehydrogenase [cytochrome] compare
MIT1002_03485 -2.7 -2.8 Na(+)-translocating NADH-quinone reductase subunit D compare
MIT1002_00756 -2.7 -16.6 TonB-dependent receptor compare
MIT1002_01816 -2.6 -16.6 Phosphoenolpyruvate synthase compare
MIT1002_02760 -2.6 -3.5 ATP-dependent Clp protease proteolytic subunit precursor compare
MIT1002_01222 -2.6 -2.2 Glutamate--cysteine ligase compare
MIT1002_02136 -2.6 -5.9 hypothetical protein compare
MIT1002_03791 -2.6 -9.9 N-acetylmuramoyl-L-alanine amidase AmiB precursor compare
MIT1002_00762 -2.5 -13.6 Anaphase-promoting complex, cyclosome, subunit 3 compare
MIT1002_00843 -2.5 -6.7 hypothetical protein compare
MIT1002_03033 -2.5 -3.5 Ribosomal RNA small subunit methyltransferase H compare
MIT1002_00751 -2.5 -2.2 Phosphate regulon transcriptional regulatory protein PhoB compare
MIT1002_00454 -2.5 -3.3 Penicillin-binding protein 1A compare
MIT1002_03908 -2.4 -6.5 NAD(P) transhydrogenase subunit alpha compare
MIT1002_00757 -2.4 -10.6 hypothetical protein compare
MIT1002_02404 -2.4 -6.3 Glucokinase compare
MIT1002_00758 -2.4 -10.6 Biopolymer transport protein ExbB compare
MIT1002_01515 -2.3 -4.4 Release factor glutamine methyltransferase compare
MIT1002_00742 -2.3 -6.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
MIT1002_00111 -2.3 -6.2 ATP-dependent DNA helicase RecG compare
MIT1002_00988 -2.3 -7.1 NADPH-dependent 7-cyano-7-deazaguanine reductase compare
MIT1002_01544 -2.3 -8.7 D-alanyl-D-alanine carboxypeptidase compare
MIT1002_00755 -2.2 -12.0 hypothetical protein compare
MIT1002_01263 -2.2 -5.7 7-cyano-7-deazaguanine synthase compare
MIT1002_02525 -2.1 -2.9 Pur regulon 18 kDa protein compare
MIT1002_02715 -2.1 -3.3 Elongation factor 4 compare
MIT1002_03909 -2.1 -9.8 NAD(P) transhydrogenase subunit alpha part 1 compare
MIT1002_02479 -2.1 -1.2 hypothetical protein compare
MIT1002_03003 -2.1 -5.4 Pyruvate dehydrogenase E1 component compare
MIT1002_03904 -2.0 -9.3 Beta-lactamase precursor compare
MIT1002_00683 -2.0 -4.5 Elongation factor P--(R)-beta-lysine ligase compare
MIT1002_02134 -2.0 -5.5 putative copper-importing P-type ATPase A compare
MIT1002_02489 -2.0 -7.3 Deoxycytidine triphosphate deaminase compare
MIT1002_01457 -2.0 -1.6 Heat shock protein 70 compare
MIT1002_01264 -2.0 -6.1 7-carboxy-7-deazaguanine synthase compare
MIT1002_04122 -2.0 -3.9 Sporulation initiation inhibitor protein soj compare
MIT1002_03907 -2.0 -10.1 NAD(P) transhydrogenase subunit beta compare
MIT1002_04016 -1.9 -8.6 Pimelyl-[acyl-carrier protein] methyl ester esterase compare
MIT1002_03802 -1.9 -4.3 Outer membrane porin F precursor compare
MIT1002_00814 -1.9 -3.3 Ubiquinol-cytochrome c reductase iron-sulfur subunit compare
MIT1002_01923 -1.8 -5.5 Cell division protein ZipA compare
MIT1002_01984 -1.8 -5.0 queuosine biosynthesis protein QueD compare
MIT1002_00486 -1.8 -1.0 Protein-export protein SecB compare
MIT1002_02653 -1.8 -1.4 Nucleoid-associated protein YbaB compare
MIT1002_00012 -1.8 -3.3 Cytochrome c4 precursor compare
MIT1002_00845 -1.8 -4.1 putative transcriptional regulatory protein YeeN compare
MIT1002_03993 -1.7 -8.2 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MIT1002_02972 -1.7 -5.8 Glycine cleavage system H protein compare
MIT1002_00997 -1.7 -1.0 hypothetical protein compare
MIT1002_00877 -1.7 -3.7 Repressor protein PhoU compare
MIT1002_02679 -1.7 -3.1 Ribosomal large subunit pseudouridine synthase D compare
MIT1002_00224 -1.7 -4.8 Ribonuclease G compare
MIT1002_02991 -1.6 -3.8 putative 5-formyltetrahydrofolate cyclo-ligase compare
MIT1002_00670 -1.6 -2.0 Outer membrane protein TolC precursor compare


Specific Phenotypes

None in this experiment

For Alteromonas macleodii MIT1002 in pro99_seawater experiments