Experiment set1S492 for Alteromonas macleodii MIT1002
monoculture; Experiment B, time point 5
Group: pro99_seawaterMedia: Pro99_seawater
Culturing: Alteromonas_MIT1002_ML10, bottle_100mL, Aerobic, at 24 (C), shaken=0 rpm
By: Christine Ziegler on 12/1/24
Media components: 50 uM Sodium phosphate monobasic monohydrate, 800 uM Ammonium chloride, 1.17 uM EDTA (disodium salt), 1.18 uM Ferric chloride, 0.008 uM Zinc sulfate heptahydrate, 0.005 uM Cobalt chloride hexahydrate, 0.09 uM Manganese (II) chloride tetrahydrate, 0.003 uM Sodium Molybdate Dihydrate, 0.01 uM Sodium selenite pentahydrate, 0.01 uM Nickel (II) chloride hexahydrate, 1 X Filtered Seawater
Specific Phenotypes
For 1 genes in this experiment
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Fermentations: Lactate | 1 |
| Fermentations: Mixed acid | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| pyruvate fermentation to (R)-lactate | 1 | 1 | 1 |
| L-alanine degradation II (to D-lactate) | 3 | 3 | 1 |
| vancomycin resistance I | 3 | 1 | 1 |
| L-alanine degradation VI (reductive Stickland reaction) | 6 | 2 | 1 |
| lactate fermentation to acetate, CO2 and hydrogen (Desulfovibrionales) | 8 | 4 | 1 |
| superpathway of fermentation (Chlamydomonas reinhardtii) | 9 | 5 | 1 |
| superpathway of L-alanine fermentation (Stickland reaction) | 9 | 4 | 1 |
| mixed acid fermentation | 16 | 13 | 1 |
| superpathway of glucose and xylose degradation | 17 | 14 | 1 |
| heterolactic fermentation | 18 | 15 | 1 |