| Pathway | #Steps | #Present | #Specific |
|---|
| L-alanine biosynthesis I | 2 | 2 | 1 |
| benzoyl-CoA biosynthesis | 3 | 3 | 1 |
| L-serine biosynthesis I | 3 | 3 | 1 |
| L-leucine degradation I | 6 | 5 | 2 |
| L-isoleucine biosynthesis V | 3 | 2 | 1 |
| L-cysteine biosynthesis IX (Trichomonas vaginalis) | 3 | 2 | 1 |
| L-isoleucine degradation II | 3 | 2 | 1 |
| L-valine degradation II | 3 | 2 | 1 |
| L-leucine degradation III | 3 | 2 | 1 |
| L-leucine degradation V (oxidative Stickland reaction) | 3 | 1 | 1 |
| L-valine degradation III (oxidative Stickland reaction) | 3 | 1 | 1 |
| L-isoleucine degradation III (oxidative Stickland reaction) | 3 | 1 | 1 |
| L-valine biosynthesis | 4 | 4 | 1 |
| superpathway of L-alanine biosynthesis | 4 | 4 | 1 |
| superpathway of L-serine and glycine biosynthesis I | 4 | 4 | 1 |
| L-serine biosynthesis II | 4 | 3 | 1 |
| L-valine degradation I | 8 | 5 | 2 |
| 2-methyl-branched fatty acid β-oxidation | 14 | 9 | 3 |
| adipate degradation | 5 | 5 | 1 |
| fatty acid β-oxidation IV (unsaturated, even number) | 5 | 4 | 1 |
| adipate biosynthesis | 5 | 4 | 1 |
| fatty acid β-oxidation II (plant peroxisome) | 5 | 3 | 1 |
| propanoyl-CoA degradation II | 5 | 3 | 1 |
| acrylate degradation I | 5 | 3 | 1 |
| L-leucine degradation IV (reductive Stickland reaction) | 5 | 1 | 1 |
| benzoate biosynthesis III (CoA-dependent, non-β-oxidative) | 5 | 1 | 1 |
| (8E,10E)-dodeca-8,10-dienol biosynthesis | 11 | 6 | 2 |
| superpathway of branched chain amino acid biosynthesis | 17 | 17 | 3 |
| L-leucine biosynthesis | 6 | 6 | 1 |
| glyoxylate cycle | 6 | 6 | 1 |
| L-isoleucine biosynthesis IV | 6 | 4 | 1 |
| β-alanine biosynthesis II | 6 | 4 | 1 |
| L-isoleucine degradation I | 6 | 4 | 1 |
| methyl ketone biosynthesis (engineered) | 6 | 3 | 1 |
| L-isoleucine biosynthesis I (from threonine) | 7 | 7 | 1 |
| superpathway of glyoxylate cycle and fatty acid degradation | 14 | 11 | 2 |
| benzoyl-CoA degradation I (aerobic) | 7 | 5 | 1 |
| fatty acid β-oxidation I (generic) | 7 | 5 | 1 |
| fatty acid β-oxidation VI (mammalian peroxisome) | 7 | 4 | 1 |
| L-isoleucine biosynthesis III | 7 | 4 | 1 |
| L-isoleucine biosynthesis II | 8 | 6 | 1 |
| superpathway of sulfate assimilation and cysteine biosynthesis | 9 | 9 | 1 |
| phenylacetate degradation I (aerobic) | 9 | 7 | 1 |
| benzoate biosynthesis I (CoA-dependent, β-oxidative) | 9 | 5 | 1 |
| valproate β-oxidation | 9 | 5 | 1 |
| superpathway of coenzyme A biosynthesis II (plants) | 10 | 8 | 1 |
| 3-phenylpropanoate degradation | 10 | 6 | 1 |
| superpathway of phenylethylamine degradation | 11 | 8 | 1 |
| Spodoptera littoralis pheromone biosynthesis | 22 | 4 | 2 |
| oleate β-oxidation | 35 | 28 | 3 |
| superpathway of glyoxylate bypass and TCA | 12 | 10 | 1 |
| superpathway of L-isoleucine biosynthesis I | 13 | 13 | 1 |
| formaldehyde assimilation I (serine pathway) | 13 | 12 | 1 |
| (4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase) | 13 | 2 | 1 |
| docosahexaenoate biosynthesis III (6-desaturase, mammals) | 14 | 2 | 1 |
| superpathway of L-threonine metabolism | 18 | 15 | 1 |
| superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass | 26 | 22 | 1 |
| platensimycin biosynthesis | 26 | 6 | 1 |
| even iso-branched-chain fatty acid biosynthesis | 34 | 30 | 1 |
| anteiso-branched-chain fatty acid biosynthesis | 34 | 30 | 1 |
| odd iso-branched-chain fatty acid biosynthesis | 34 | 30 | 1 |