Experiment set1S482 for Alteromonas macleodii MIT1002

Compare to:

monoculture; Experiment A, time point 2

200 most important genes:

  gene name fitness t score description  
MIT1002_02348 -7.5 -5.2 hypothetical protein compare
MIT1002_03690 -7.4 -5.1 DnaK suppressor protein compare
MIT1002_02524 -7.3 -5.0 Amidophosphoribosyltransferase compare
MIT1002_00471 -7.2 -5.0 N-acetyl-gamma-glutamyl-phosphate reductase compare
MIT1002_00948 -7.2 -5.0 3-isopropylmalate dehydrogenase compare
MIT1002_00504 -7.2 -5.0 Acetolactate synthase isozyme 3 small subunit compare
MIT1002_01027 -7.2 -7.0 Phosphoribosylformylglycinamidine synthase compare
MIT1002_02636 -7.2 -4.9 Imidazole glycerol phosphate synthase subunit HisH compare
MIT1002_04045 -7.0 -4.9 Ketol-acid reductoisomerase compare
MIT1002_02219 -7.0 -4.8 Phosphoribosylformylglycinamidine cyclo-ligase compare
MIT1002_00946 -7.0 -4.8 3-isopropylmalate dehydratase small subunit 1 compare
MIT1002_02220 -7.0 -4.8 Phosphoribosylglycinamide formyltransferase compare
MIT1002_00469 -6.9 -4.8 Ornithine carbamoyltransferase compare
MIT1002_01112 -6.9 -4.8 Homoserine O-succinyltransferase compare
MIT1002_03179 -6.9 -4.7 Cystathionine beta-lyase PatB compare
MIT1002_00949 -6.8 -9.4 2-isopropylmalate synthase compare
MIT1002_03139 -6.8 -10.4 Glutamate synthase [NADPH] large chain precursor compare
MIT1002_02349 -6.8 -4.7 2-hydroxypropyl-CoM lyase compare
MIT1002_00377 -6.7 -4.7 Branched-chain-amino-acid aminotransferase 2 compare
MIT1002_00522 -6.7 -4.6 N5-carboxyaminoimidazole ribonucleotide synthase compare
MIT1002_01119 -6.7 -4.6 HTH-type transcriptional regulator GltC compare
MIT1002_02008 -6.7 -8.0 Para-aminobenzoate synthase component 1 compare
MIT1002_03086 -6.7 -4.6 Aspartokinase I/homoserine dehydrogenase I compare
MIT1002_01266 -6.7 -4.6 Asparagine synthetase B [glutamine-hydrolyzing] compare
MIT1002_02638 -6.7 -4.6 Imidazole glycerol phosphate synthase subunit HisF compare
MIT1002_03015 -6.6 -4.6 aspartoacylase compare
MIT1002_04040 -6.6 -4.6 L-threonine dehydratase biosynthetic IlvA compare
MIT1002_02639 -6.6 -4.6 Phosphoribosyl-ATP pyrophosphatase compare
MIT1002_02266 -6.6 -4.6 Methionine gamma-lyase compare
MIT1002_03961 -6.6 -4.6 Phosphoribosylamine--glycine ligase compare
MIT1002_00947 -6.6 -4.5 3-isopropylmalate dehydratase large subunit compare
MIT1002_00467 -6.5 -4.5 Argininosuccinate lyase compare
MIT1002_02993 -6.5 -4.5 D-3-phosphoglycerate dehydrogenase compare
MIT1002_02634 -6.5 -4.5 Histidinol-phosphate aminotransferase compare
MIT1002_02702 -6.5 -4.5 Serine hydroxymethyltransferase compare
MIT1002_02633 -6.5 -4.5 Histidinol dehydrogenase compare
MIT1002_02635 -6.4 -4.5 Histidine biosynthesis bifunctional protein HisB compare
MIT1002_00468 -6.4 -4.4 Argininosuccinate synthase compare
MIT1002_03140 -6.4 -4.4 Glutamate synthase [NADPH] small chain compare
MIT1002_00466 -6.4 -4.4 Amino-acid acetyltransferase compare
MIT1002_00439 -6.4 -6.2 Para-aminobenzoate synthase glutamine amidotransferase component II compare
MIT1002_04044 -6.4 -4.4 HTH-type transcriptional regulator GltC compare
MIT1002_01466 -6.3 -4.4 Carbamoyl-phosphate synthase small chain compare
MIT1002_03539 -6.3 -3.1 Bifunctional protein BirA compare
MIT1002_01467 -6.2 -4.3 Carbamoyl-phosphate synthase large chain compare
MIT1002_04041 -6.2 -4.3 Dihydroxy-acid dehydratase compare
MIT1002_03084 -6.2 -4.3 Threonine synthase compare
MIT1002_02708 -6.1 -6.0 Phosphoserine phosphatase compare
MIT1002_01885 -6.1 -4.2 Gamma-glutamyl phosphate reductase compare
MIT1002_00503 -6.1 -4.2 Acetolactate synthase isozyme 3 large subunit compare
MIT1002_02637 -6.0 -4.2 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MIT1002_03062 -6.0 -4.2 Pyrroline-5-carboxylate reductase compare
MIT1002_01264 -6.0 -4.2 7-carboxy-7-deazaguanine synthase compare
MIT1002_01379 -6.0 -10.0 Biotin synthase compare
MIT1002_01429 -6.0 -4.1 Anthranilate synthase component II compare
MIT1002_01428 -6.0 -4.1 Anthranilate synthase component II compare
MIT1002_00160 -6.0 -4.1 Diaminopimelate decarboxylase compare
MIT1002_00161 -5.9 -4.1 putative small periplasmic lipoprotein compare
MIT1002_01736 -5.9 -9.8 Aminodeoxychorismate lyase compare
MIT1002_03085 -5.8 -4.0 Homoserine kinase compare
MIT1002_00437 -5.8 -4.0 Succinylornithine transaminase/acetylornithine aminotransferase compare
MIT1002_02041 -5.5 -2.8 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase compare
MIT1002_01382 -5.5 -15.9 ATP-dependent dethiobiotin synthetase BioD 1 compare
MIT1002_01430 -5.5 -3.8 Anthranilate synthase component 1 compare
MIT1002_00068 -5.4 -6.4 Chorismate--pyruvate lyase compare
MIT1002_01129 -5.3 -3.4 Carbon storage regulator compare
MIT1002_02632 -5.3 -3.7 ATP phosphoribosyltransferase compare
MIT1002_02306 -5.2 -7.2 Glutamate-pyruvate aminotransferase AlaA compare
MIT1002_01378 -5.2 -11.1 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
MIT1002_03186 -5.0 -9.6 Nitrogen regulation protein NR(I) compare
MIT1002_03616 -5.0 -3.4 NAD(P)H-flavin reductase compare
MIT1002_00470 -5.0 -8.6 Acetylglutamate kinase compare
MIT1002_01380 -4.9 -14.5 8-amino-7-oxononanoate synthase compare
MIT1002_01316 -4.9 -7.5 P-protein compare
MIT1002_01427 -4.9 -3.4 Tryptophan biosynthesis protein TrpCF compare
MIT1002_00423 -4.9 -3.4 Aspartate carbamoyltransferase catalytic chain compare
MIT1002_02184 -4.8 -2.8 Orotidine 5'-phosphate decarboxylase compare
MIT1002_00827 -4.8 -3.2 RNA polymerase sigma-54 factor 2 compare
MIT1002_01984 -4.7 -9.1 queuosine biosynthesis protein QueD compare
MIT1002_00673 -4.7 -12.4 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA compare
MIT1002_03185 -4.7 -12.2 Nitrogen regulation protein NR(II) compare
MIT1002_04092 -4.7 -3.3 putative type I restriction enzymeP M protein compare
MIT1002_02035 -4.7 -2.4 Dihydroorotate dehydrogenase (quinone) compare
MIT1002_03331 -4.6 -9.1 D-lactate dehydrogenase compare
MIT1002_00988 -4.5 -9.6 NADPH-dependent 7-cyano-7-deazaguanine reductase compare
MIT1002_00073 -4.5 -2.9 Cytochrome c5 compare
MIT1002_00093 -4.5 -13.0 Thiazole synthase compare
MIT1002_01345 -4.4 -2.6 tRNA-Ser compare
MIT1002_03488 -4.3 -3.0 Na(+)-translocating NADH-quinone reductase subunit A compare
MIT1002_00235 -4.2 -2.9 Glycogen synthase compare
MIT1002_00094 -4.2 -1.2 sulfur carrier protein ThiS compare
MIT1002_02538 -4.1 -2.3 3-oxoacyl-[acyl-carrier-protein] synthase 1 compare
MIT1002_02581 -4.0 -2.8 Disulfide oxidoreductase compare
MIT1002_00096 -4.0 -17.4 Thiamine-phosphate synthase compare
MIT1002_01381 -4.0 -9.8 Malonyl-CoA O-methyltransferase BioC compare
MIT1002_01981 -4.0 -11.9 Inner membrane protein YejM compare
MIT1002_00751 -3.9 -2.5 Phosphate regulon transcriptional regulatory protein PhoB compare
MIT1002_00095 -3.9 -12.8 Molybdopterin-synthase adenylyltransferase compare
MIT1002_03484 -3.9 -2.2 Na(+)-translocating NADH-quinone reductase subunit E compare
MIT1002_03978 -3.8 -2.6 General secretion pathway protein F compare
MIT1002_01263 -3.8 -6.3 7-cyano-7-deazaguanine synthase compare
MIT1002_00815 -3.8 -2.6 Cytochrome b/c1 compare
MIT1002_03483 -3.7 -2.1 Na(+)-translocating NADH-quinone reductase subunit F compare
MIT1002_00097 -3.7 -17.4 Phosphomethylpyrimidine synthase compare
MIT1002_03979 -3.7 -1.9 Pullulanase secretion protein PulG compare
MIT1002_00233 -3.7 -2.5 Dye resistance protein compare
MIT1002_03977 -3.7 -2.5 Type II traffic warden ATPase compare
MIT1002_00092 -3.7 -10.0 2-iminoacetate synthase compare
MIT1002_01352 -3.7 -13.1 Aspartate-semialdehyde dehydrogenase compare
MIT1002_02132 -3.6 -2.5 Cytochrome c oxidase subunit III compare
MIT1002_03485 -3.6 -2.5 Na(+)-translocating NADH-quinone reductase subunit D compare
MIT1002_00115 -3.6 -2.1 Iron(III)-binding periplasmic protein compare
MIT1002_00521 -3.6 -4.0 N5-carboxyaminoimidazole ribonucleotide mutase compare
MIT1002_02406 -3.6 -2.5 6-phosphogluconolactonase compare
MIT1002_03805 -3.6 -2.5 hypothetical protein compare
MIT1002_01163 -3.6 -2.4 hypothetical protein compare
MIT1002_03003 -3.5 -4.2 Pyruvate dehydrogenase E1 component compare
MIT1002_03980 -3.5 -2.4 General secretion pathway protein H compare
MIT1002_03982 -3.5 -2.4 PilD-dependent protein PddD compare
MIT1002_03487 -3.5 -2.4 Na(+)-translocating NADH-quinone reductase subunit B compare
MIT1002_03055 -3.5 -4.1 Glutathione synthetase compare
MIT1002_00114 -3.4 -2.2 hypothetical protein compare
MIT1002_02404 -3.4 -8.1 Glucokinase compare
MIT1002_01816 -3.4 -19.5 Phosphoenolpyruvate synthase compare
MIT1002_03981 -3.3 -1.9 Putative general secretion pathway protein I compare
MIT1002_03486 -3.3 -2.3 Na(+)-translocating NADH-quinone reductase subunit C compare
MIT1002_03985 -3.3 -2.3 General secretion pathway protein M compare
MIT1002_00117 -3.3 -2.2 Maltose/maltodextrin import ATP-binding protein MalK compare
MIT1002_03976 -3.3 -2.3 Pullulanase secretion envelope PulD compare
MIT1002_00781 -3.3 -2.9 Ribosomal RNA small subunit methyltransferase A compare
MIT1002_04093 -3.2 -1.3 Type I restriction modification DNA specificity domain protein compare
MIT1002_04120 -3.2 -1.3 F0F1 ATP synthase subunit I compare
MIT1002_01001 -3.2 -6.8 PII uridylyl-transferase compare
MIT1002_00742 -3.2 -5.0 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
MIT1002_03983 -3.1 -2.2 Putative general secretion pathway protein K compare
MIT1002_02991 -3.1 -6.6 putative 5-formyltetrahydrofolate cyclo-ligase compare
MIT1002_03481 -3.1 -2.9 hypothetical protein compare
MIT1002_03033 -3.1 -4.0 Ribosomal RNA small subunit methyltransferase H compare
MIT1002_01235 -3.1 -3.0 Monothiol glutaredoxin compare
MIT1002_00719 -3.1 -10.0 cytochrome c oxidase accessory protein CcoG compare
MIT1002_03491 -3.1 -17.5 Phosphoenolpyruvate carboxylase compare
MIT1002_01435 -3.1 -1.9 Ribosomal large subunit pseudouridine synthase B compare
MIT1002_01544 -3.0 -12.3 D-alanyl-D-alanine carboxypeptidase compare
MIT1002_00752 -3.0 -2.9 Phosphate regulon sensor protein PhoR compare
MIT1002_01222 -3.0 -2.1 Glutamate--cysteine ligase compare
MIT1002_02759 -3.0 -5.3 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MIT1002_01217 -2.9 -5.9 2-dehydropantoate 2-reductase compare
MIT1002_02129 -2.9 -5.5 hypothetical protein compare
MIT1002_02134 -2.9 -6.0 putative copper-importing P-type ATPase A compare
MIT1002_02136 -2.8 -5.3 hypothetical protein compare
MIT1002_03130 -2.8 -6.4 2-methylcitrate synthase compare
MIT1002_04036 -2.7 -4.0 LexA repressor compare
MIT1002_03984 -2.7 -1.8 General secretion pathway protein L compare
MIT1002_00843 -2.7 -5.0 hypothetical protein compare
MIT1002_02128 -2.7 -3.4 hypothetical protein compare
MIT1002_01923 -2.6 -8.5 Cell division protein ZipA compare
MIT1002_01515 -2.5 -5.0 Release factor glutamine methyltransferase compare
MIT1002_03908 -2.5 -5.7 NAD(P) transhydrogenase subunit alpha compare
MIT1002_02807 -2.4 -4.0 Inositol-1-monophosphatase compare
MIT1002_04124 -2.4 -1.7 Glucose-inhibited division protein A compare
MIT1002_00012 -2.4 -3.0 Cytochrome c4 precursor compare
MIT1002_01168 -2.4 -2.0 Flp pilus assembly protein TadD, contains TPR repeats compare
MIT1002_02013 -2.4 -8.7 2-oxoisovalerate dehydrogenase subunit beta compare
MIT1002_02133 -2.4 -2.9 putative integral membrane protein linked to a cation pump compare
MIT1002_03909 -2.4 -8.4 NAD(P) transhydrogenase subunit alpha part 1 compare
MIT1002_02573 -2.3 -6.4 hypothetical protein compare
MIT1002_02973 -2.3 -9.0 Aminomethyltransferase compare
MIT1002_03785 -2.3 -10.9 Modulator of FtsH protease HflC compare
MIT1002_03137 -2.3 -7.1 Aerobic respiration control sensor protein ArcB compare
MIT1002_00761 -2.3 -3.9 transport protein TonB compare
MIT1002_00672 -2.3 -4.9 putative dehydrogenase compare
MIT1002_02760 -2.2 -2.8 ATP-dependent Clp protease proteolytic subunit precursor compare
MIT1002_00670 -2.2 -1.5 Outer membrane protein TolC precursor compare
MIT1002_00814 -2.2 -3.4 Ubiquinol-cytochrome c reductase iron-sulfur subunit compare
MIT1002_01192 -2.2 -4.5 Peptide chain release factor 3 compare
MIT1002_02653 -2.2 -1.6 Nucleoid-associated protein YbaB compare
MIT1002_00014 -2.1 -7.8 DNA polymerase I compare
MIT1002_03786 -2.1 -8.1 Modulator of FtsH protease HflK compare
MIT1002_00877 -2.1 -6.1 Repressor protein PhoU compare
MIT1002_02130 -2.1 -2.0 cbb3-type cytochrome c oxidase subunit II compare
MIT1002_03806 -2.1 -3.5 hypothetical protein compare
MIT1002_02397 -2.1 -10.9 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating compare
MIT1002_04134 -2.1 -10.4 Sporulation initiation inhibitor protein soj compare
MIT1002_00111 -2.1 -5.1 ATP-dependent DNA helicase RecG compare
MIT1002_00109 -2.1 -7.0 Putative reactive intermediate deaminase TdcF compare
MIT1002_03181 -2.1 -6.1 hypothetical protein compare
MIT1002_02012 -2.0 -11.5 Pyruvate dehydrogenase E1 component subunit alpha compare
MIT1002_00116 -2.0 -1.8 Spermidine/putrescine transport system permease protein PotB compare
MIT1002_02971 -2.0 -13.2 Glycine dehydrogenase [decarboxylating] compare
MIT1002_00224 -2.0 -5.0 Ribonuclease G compare
MIT1002_00884 -2.0 -2.3 hypothetical protein compare
MIT1002_00683 -2.0 -4.9 Elongation factor P--(R)-beta-lysine ligase compare
MIT1002_04122 -2.0 -2.8 Sporulation initiation inhibitor protein soj compare
MIT1002_01457 -2.0 -1.6 Heat shock protein 70 compare
MIT1002_03371 -2.0 -2.6 HTH-type transcriptional repressor FabR compare
MIT1002_00762 -2.0 -10.5 Anaphase-promoting complex, cyclosome, subunit 3 compare
MIT1002_00404 -1.9 -5.9 Formyltetrahydrofolate deformylase compare
MIT1002_02441 -1.9 -4.4 Helix-turn-helix domain protein compare
MIT1002_02718 -1.9 -3.7 Sigma-E factor negative regulatory protein compare
MIT1002_02715 -1.9 -3.0 Elongation factor 4 compare


Specific Phenotypes

For 1 genes in this experiment