Experiment set1S478 for Bacteroides stercoris CC31F

Compare to:

Mucin from porcine stomach type II 2.5 mg/ml carbon source

200 most important genes:

  gene name fitness t score description  
HMPREF1181_RS09235 -6.3 -10.2 hypothetical protein compare
HMPREF1181_RS08230 -4.8 -3.7 hypothetical protein compare
HMPREF1181_RS08795 -4.6 -11.2 hypothetical protein compare
HMPREF1181_RS03235 -3.7 -4.0 elongation factor P compare
HMPREF1181_RS10195 -3.6 -8.4 SMI1/KNR4 family protein compare
HMPREF1181_RS18085 -3.3 -8.4 hypothetical protein compare
HMPREF1181_RS16620 -3.2 -2.4 YebC/PmpR family DNA-binding transcriptional regulator compare
HMPREF1181_RS06100 -2.9 -8.9 DUF4270 domain-containing protein compare
HMPREF1181_RS10185 -2.9 -5.9 SMI1/KNR4 family protein compare
HMPREF1181_RS09020 -2.9 -1.3 4Fe-4S binding protein compare
HMPREF1181_RS14790 -2.7 -13.9 alpha amylase C-terminal domain-containing protein compare
HMPREF1181_RS09330 -2.7 -1.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
HMPREF1181_RS08190 -2.7 -3.7 cardiolipin synthase compare
HMPREF1181_RS12030 -2.7 -1.2 hypothetical protein compare
HMPREF1181_RS17810 -2.6 -1.0 hypothetical protein compare
HMPREF1181_RS05780 -2.6 -2.5 SurA N-terminal domain-containing protein compare
HMPREF1181_RS15095 -2.5 -9.3 UDP-glucose 4-epimerase GalE compare
HMPREF1181_RS05800 -2.4 -4.6 hypothetical protein compare
HMPREF1181_RS10600 -2.4 -1.3 ABC transporter ATP-binding protein compare
HMPREF1181_RS06930 -2.3 -2.2 tRNA 2-thiouridine(34) synthase MnmA compare
HMPREF1181_RS02450 -2.2 -0.9 hypothetical protein compare
HMPREF1181_RS15120 -2.1 -1.2 electron transport complex subunit RsxC compare
HMPREF1181_RS15115 -2.1 -1.2 RnfABCDGE type electron transport complex subunit D compare
HMPREF1181_RS14905 -2.1 -1.9 acyltransferase family protein compare
HMPREF1181_RS01140 -2.0 -8.9 2-oxoacid:acceptor oxidoreductase subunit alpha compare
HMPREF1181_RS12125 -2.0 -3.5 hypothetical protein compare
HMPREF1181_RS07410 -2.0 -1.6 hypothetical protein compare
HMPREF1181_RS16400 -2.0 -11.6 tetratricopeptide repeat protein compare
HMPREF1181_RS15595 -1.9 -2.2 cytidine deaminase compare
HMPREF1181_RS11840 -1.9 -5.6 iron ABC transporter permease compare
HMPREF1181_RS09265 -1.9 -2.2 3-dehydroquinate synthase compare
HMPREF1181_RS04275 -1.9 -7.5 tetratricopeptide repeat protein compare
HMPREF1181_RS16385 -1.9 -4.1 tetratricopeptide repeat protein compare
HMPREF1181_RS09135 -1.9 -4.1 DUF349 domain-containing protein compare
HMPREF1181_RS00190 -1.8 -2.1 translocation/assembly module TamB domain-containing protein compare
HMPREF1181_RS00840 -1.8 -6.1 butyrate kinase compare
HMPREF1181_RS03965 -1.8 -1.7 hypothetical protein compare
HMPREF1181_RS00185 -1.8 -1.2 BamA/TamA family outer membrane protein compare
HMPREF1181_RS02460 -1.8 -5.3 glycosyltransferase family 2 protein compare
HMPREF1181_RS04925 -1.8 -1.2 Dabb family protein compare
HMPREF1181_RS04590 -1.8 -4.8 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
HMPREF1181_RS04675 -1.7 -4.2 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
HMPREF1181_RS06400 -1.7 -2.2 hemerythrin domain-containing protein compare
HMPREF1181_RS14620 -1.7 -3.2 TraR/DksA C4-type zinc finger protein compare
HMPREF1181_RS13150 -1.7 -1.2 plasmid mobilization relaxosome protein MobC compare
HMPREF1181_RS01145 -1.6 -5.8 2-oxoacid:ferredoxin oxidoreductase subunit beta compare
HMPREF1181_RS01320 -1.6 -8.0 glycosyltransferase compare
HMPREF1181_RS12645 -1.6 -3.3 hypothetical protein compare
HMPREF1181_RS04465 -1.5 -1.6 tetratricopeptide repeat protein compare
HMPREF1181_RS08085 -1.5 -4.8 efflux RND transporter periplasmic adaptor subunit compare
HMPREF1181_RS02385 -1.5 -8.0 glycoside hydrolase family 88 protein compare
HMPREF1181_RS12170 -1.5 -3.3 hypothetical protein compare
HMPREF1181_RS15445 -1.5 -2.9 sugar kinase compare
HMPREF1181_RS14020 -1.5 -1.5 electron transfer flavoprotein subunit alpha/FixB family protein compare
HMPREF1181_RS06190 -1.5 -1.9 tetratricopeptide repeat protein compare
HMPREF1181_RS08790 -1.5 -5.1 lipoyl synthase compare
HMPREF1181_RS11195 -1.4 -1.6 hypothetical protein compare
HMPREF1181_RS01325 -1.4 -7.6 glycosyltransferase compare
HMPREF1181_RS03380 -1.4 -4.3 hypothetical protein compare
HMPREF1181_RS06905 -1.4 -9.1 FecR family protein compare
HMPREF1181_RS02505 -1.4 -6.5 UDP-galactopyranose mutase compare
HMPREF1181_RS05255 -1.4 -0.9 hypothetical protein compare
HMPREF1181_RS03020 -1.4 -6.1 ATPase compare
HMPREF1181_RS08940 -1.4 -7.2 PTS sugar transporter subunit IIC compare
HMPREF1181_RS12350 -1.4 -2.5 porin family protein compare
HMPREF1181_RS05620 -1.4 -3.4 chromate transporter compare
HMPREF1181_RS05665 -1.4 -4.0 pyruvate:ferredoxin (flavodoxin) oxidoreductase compare
HMPREF1181_RS17720 -1.3 -1.2 hypothetical protein compare
HMPREF1181_RS01625 -1.3 -4.0 gluconate 5-dehydrogenase compare
HMPREF1181_RS04585 -1.3 -1.9 hypothetical protein compare
HMPREF1181_RS08090 -1.3 -7.7 CusA/CzcA family heavy metal efflux RND transporter compare
HMPREF1181_RS05850 -1.3 -2.7 hypothetical protein compare
HMPREF1181_RS18165 -1.3 -2.4 hypothetical protein compare
HMPREF1181_RS02335 -1.3 -10.1 response regulator compare
HMPREF1181_RS08265 -1.3 -2.1 (d)CMP kinase compare
HMPREF1181_RS04765 -1.3 -2.9 gliding motility-associated protein GldE compare
HMPREF1181_RS06490 -1.3 -3.1 DUF4827 domain-containing protein compare
HMPREF1181_RS11845 -1.3 -5.6 ABC transporter substrate-binding protein compare
HMPREF1181_RS05775 -1.3 -4.7 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN compare
HMPREF1181_RS05230 -1.3 -0.8 hypothetical protein compare
HMPREF1181_RS07685 -1.3 -0.8 helix-turn-helix domain-containing protein compare
HMPREF1181_RS13315 -1.3 -1.6 manganese efflux pump compare
HMPREF1181_RS18070 -1.2 -1.5 hypothetical protein compare
HMPREF1181_RS06320 -1.2 -1.0 shikimate dehydrogenase compare
HMPREF1181_RS12105 -1.2 -3.6 hypothetical protein compare
HMPREF1181_RS10965 -1.2 -1.3 HU family DNA-binding protein compare
HMPREF1181_RS16945 -1.2 -6.6 pyruvate carboxylase subunit B compare
HMPREF1181_RS09100 -1.2 -2.9 DUF1573 domain-containing protein compare
HMPREF1181_RS10165 -1.2 -1.2 hypothetical protein compare
HMPREF1181_RS08095 -1.2 -4.0 TolC family protein compare
HMPREF1181_RS07445 -1.2 -4.4 ATP-dependent Clp protease ATP-binding subunit ClpX compare
HMPREF1181_RS01240 -1.2 -1.0 pyruvate kinase compare
HMPREF1181_RS10630 -1.2 -2.5 precorrin-2 C(20)-methyltransferase compare
HMPREF1181_RS08500 -1.2 -2.2 methylmalonyl-CoA mutase small subunit compare
HMPREF1181_RS00265 -1.1 -6.1 23S ribosomal RNA compare
HMPREF1181_RS00035 -1.1 -3.6 thiamine diphosphokinase compare
HMPREF1181_RS05955 -1.1 -3.1 hypothetical protein compare
HMPREF1181_RS01410 -1.1 -8.5 TonB-dependent receptor compare
HMPREF1181_RS05345 -1.1 -5.8 phosphatase PAP2 family protein compare
HMPREF1181_RS14125 -1.1 -6.2 3-isopropylmalate dehydrogenase compare
HMPREF1181_RS10760 -1.1 -2.6 MarR family transcriptional regulator compare
HMPREF1181_RS11855 -1.1 -7.0 TonB-dependent receptor compare
HMPREF1181_RS08205 -1.1 -3.0 Lrp/AsnC ligand binding domain-containing protein compare
HMPREF1181_RS14610 -1.1 -2.7 DUF4296 domain-containing protein compare
HMPREF1181_RS01415 -1.1 -7.2 RagB/SusD family nutrient uptake outer membrane protein compare
HMPREF1181_RS12530 -1.1 -4.6 GDP-mannose 4,6-dehydratase compare
HMPREF1181_RS15130 -1.1 -1.2 SoxR reducing system RseC family protein compare
HMPREF1181_RS17805 -1.1 -1.2 hypothetical protein compare
HMPREF1181_RS14805 -1.1 -1.3 hypothetical protein compare
HMPREF1181_RS16625 -1.1 -0.6 hypothetical protein compare
HMPREF1181_RS00715 -1.1 -2.8 cupin domain-containing protein compare
HMPREF1181_RS14145 -1.1 -5.0 3-isopropylmalate dehydratase large subunit compare
HMPREF1181_RS13255 -1.1 -5.7 glycine cleavage system aminomethyltransferase GcvT compare
HMPREF1181_RS09720 -1.0 -0.5 DUF4134 domain-containing protein compare
HMPREF1181_RS11940 -1.0 -2.4 hypothetical protein compare
HMPREF1181_RS15740 -1.0 -1.2 hypothetical protein compare
HMPREF1181_RS08825 -1.0 -2.7 HAD family hydrolase compare
HMPREF1181_RS11580 -1.0 -2.0 site-specific integrase compare
HMPREF1181_RS02340 -1.0 -4.6 aminoglycoside phosphotransferase family protein compare
HMPREF1181_RS10290 -1.0 -1.5 hypothetical protein compare
HMPREF1181_RS02345 -1.0 -4.3 hypothetical protein compare
HMPREF1181_RS04440 -1.0 -3.4 MFS transporter compare
HMPREF1181_RS01615 -1.0 -2.3 polysaccharide deacetylase family protein compare
HMPREF1181_RS00900 -1.0 -1.0 rubredoxin compare
HMPREF1181_RS16865 -1.0 -3.8 D-3-phosphoglycerate dehydrogenase compare
HMPREF1181_RS14025 -1.0 -1.1 acyl-CoA dehydrogenase family protein compare
HMPREF1181_RS08945 -1.0 -4.1 5-dehydro-4-deoxy-D-glucuronate isomerase compare
HMPREF1181_RS13010 -1.0 -2.9 2,3-diphosphoglycerate-dependent phosphoglycerate mutase compare
HMPREF1181_RS09260 -1.0 -1.8 hypothetical protein compare
HMPREF1181_RS12535 -1.0 -4.3 GDP-L-fucose synthase compare
HMPREF1181_RS15895 -1.0 -2.3 ATP-binding protein compare
HMPREF1181_RS02080 -1.0 -3.5 deoxyribose-phosphate aldolase compare
HMPREF1181_RS03030 -1.0 -4.5 FAD-binding oxidoreductase compare
HMPREF1181_RS15545 -1.0 -1.5 FtsX-like permease family protein compare
HMPREF1181_RS01305 -1.0 -4.9 N-acetylneuraminate synthase family protein compare
HMPREF1181_RS04535 -0.9 -1.8 transcriptional repressor compare
HMPREF1181_RS17520 -0.9 -0.7 transposase compare
HMPREF1181_RS13595 -0.9 -2.5 hypothetical protein compare
HMPREF1181_RS08050 -0.9 -1.3 hypothetical protein compare
HMPREF1181_RS05750 -0.9 -1.8 tetratricopeptide repeat protein compare
HMPREF1181_RS05575 -0.9 -1.5 OadG family protein compare
HMPREF1181_RS13340 -0.9 -5.4 tetratricopeptide repeat protein compare
HMPREF1181_RS04345 -0.9 -0.8 hypothetical protein compare
HMPREF1181_RS03090 -0.9 -4.3 hypothetical protein compare
HMPREF1181_RS18080 -0.9 -2.2 hypothetical protein compare
HMPREF1181_RS15440 -0.9 -0.9 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
HMPREF1181_RS04310 -0.9 -2.3 adenylyl-sulfate kinase compare
HMPREF1181_RS15580 -0.9 -2.0 ABC transporter ATP-binding protein compare
HMPREF1181_RS13335 -0.9 -2.4 adenine nucleotide alpha hydrolase family protein compare
HMPREF1181_RS16990 -0.9 -6.6 TonB-dependent receptor compare
HMPREF1181_RS08665 -0.9 -5.5 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase compare
HMPREF1181_RS01255 -0.9 -3.7 tetratricopeptide repeat protein compare
HMPREF1181_RS14155 -0.9 -2.2 hypothetical protein compare
HMPREF1181_RS07320 -0.9 -1.8 hypothetical protein compare
HMPREF1181_RS14140 -0.9 -2.5 3-isopropylmalate dehydratase small subunit compare
HMPREF1181_RS06505 -0.9 -0.8 ribulose-phosphate 3-epimerase compare
HMPREF1181_RS05930 -0.9 -5.7 MFS transporter compare
HMPREF1181_RS04015 -0.9 -2.7 AraC family transcriptional regulator compare
HMPREF1181_RS11630 -0.9 -1.6 helix-turn-helix domain-containing protein compare
HMPREF1181_RS01315 -0.9 -5.2 hypothetical protein compare
HMPREF1181_RS05660 -0.9 -2.4 ATP-binding protein compare
HMPREF1181_RS06085 -0.9 -2.5 aspartate 1-decarboxylase compare
HMPREF1181_RS04815 -0.9 -4.5 inositol-3-phosphate synthase compare
HMPREF1181_RS08670 -0.9 -5.7 4-alpha-glucanotransferase compare
HMPREF1181_RS02000 -0.9 -0.9 redox-regulated ATPase YchF compare
HMPREF1181_RS12735 -0.9 -1.3 carboxypeptidase-like regulatory domain-containing protein compare
HMPREF1181_RS05570 -0.9 -3.4 pyruvate carboxylase subunit B compare
HMPREF1181_RS07630 -0.9 -4.5 signal peptide peptidase SppA compare
HMPREF1181_RS13355 -0.9 -4.8 nucleoside phosphorylase compare
HMPREF1181_RS05055 -0.9 -1.5 hypothetical protein compare
HMPREF1181_RS02530 -0.9 -1.5 shikimate kinase compare
HMPREF1181_RS04220 -0.8 -1.1 type II toxin-antitoxin system HigB family toxin compare
HMPREF1181_RS16540 -0.8 -1.8 hypothetical protein compare
HMPREF1181_RS00845 -0.8 -3.4 phosphate acetyltransferase compare
HMPREF1181_RS13815 -0.8 -1.4 hypothetical protein compare
HMPREF1181_RS11370 -0.8 -0.9 hypothetical protein compare
HMPREF1181_RS05995 -0.8 -2.0 C40 family peptidase compare
HMPREF1181_RS12860 -0.8 -2.1 hypothetical protein compare
HMPREF1181_RS11850 -0.8 -4.6 hypothetical protein compare
HMPREF1181_RS13735 -0.8 -1.5 VOC family protein compare
HMPREF1181_RS11115 -0.8 -3.3 AraC family transcriptional regulator compare
HMPREF1181_RS03395 -0.8 -2.1 RecX family transcriptional regulator compare
HMPREF1181_RS06385 -0.8 -3.0 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
HMPREF1181_RS02300 -0.8 -5.4 chondroitinase compare
HMPREF1181_RS05170 -0.8 -2.4 hypothetical protein compare
HMPREF1181_RS00080 -0.8 -2.3 FAD-binding protein compare
HMPREF1181_RS06575 -0.8 -2.2 prephenate dehydrogenase compare
HMPREF1181_RS03365 -0.8 -2.0 OmpH family outer membrane protein compare
HMPREF1181_RS16675 -0.8 -1.4 DUF4248 domain-containing protein compare
HMPREF1181_RS03750 -0.8 -3.7 hypothetical protein compare
HMPREF1181_RS00640 -0.8 -2.4 gamma carbonic anhydrase family protein compare
HMPREF1181_RS03770 -0.8 -2.3 transposase compare
HMPREF1181_RS12140 -0.8 -3.3 fimbrillin family protein compare
HMPREF1181_RS01175 -0.8 -2.6 nitroreductase compare
HMPREF1181_RS09485 -0.8 -5.7 RagB/SusD family nutrient uptake outer membrane protein compare
HMPREF1181_RS03140 -0.8 -4.6 sodium-dependent transporter compare
HMPREF1181_RS03025 -0.8 -3.4 DUF1624 domain-containing protein compare
HMPREF1181_RS07910 -0.8 -3.4 diaminopimelate dehydrogenase compare
HMPREF1181_RS01790 -0.8 -4.0 dihydrolipoyl dehydrogenase compare
HMPREF1181_RS01310 -0.8 -2.1 NTP transferase domain-containing protein compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source Mucin from porcine stomach,Type II in Bacteroides stercoris CC31F

For carbon source Mucin from porcine stomach,Type II across organisms