Experiment set1S46 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

200 most important genes:

  gene name fitness t score description  
MPMX19_03906 -4.0 -17.0 Pca regulon regulatory protein compare
MPMX19_05680 -3.0 -4.1 Cell cycle response regulator CtrA compare
MPMX19_00608 -2.7 -1.7 hypothetical protein compare
MPMX19_04112 -2.4 -5.4 hypothetical protein compare
MPMX19_01054 -2.3 -6.7 Aspartate carbamoyltransferase compare
MPMX19_00858 -2.3 -6.6 Flagellar biosynthetic protein FliP compare
MPMX19_06547 -2.2 -7.7 hypothetical protein compare
MPMX19_01053 -2.2 -4.9 Dihydroorotase compare
MPMX19_02267 -2.1 -1.5 hypothetical protein compare
MPMX19_01483 -2.1 -12.4 Flagellar basal-body rod protein FlgG compare
MPMX19_00530 -2.1 -4.0 Orotate phosphoribosyltransferase compare
MPMX19_00838 -2.1 -3.7 GTP pyrophosphokinase rsh compare
MPMX19_04087 -2.0 -4.2 Flagellum site-determining protein YlxH compare
MPMX19_04093 -2.0 -4.9 hypothetical protein compare
MPMX19_00128 -2.0 -12.2 hypothetical protein compare
MPMX19_01630 -1.8 -4.7 Phosphoribosylamine--glycine ligase compare
MPMX19_01703 -1.8 -2.9 hypothetical protein compare
MPMX19_00866 -1.8 -7.9 Flagellar biosynthetic protein FliR compare
MPMX19_05358 -1.8 -2.3 hypothetical protein compare
MPMX19_02207 -1.7 -2.9 N-(5'-phosphoribosyl)anthranilate isomerase compare
MPMX19_02303 -1.7 -3.2 hypothetical protein compare
MPMX19_02674 -1.7 -2.5 NADH:quinone reductase compare
MPMX19_04092 -1.7 -7.7 Flagellar motor switch protein FliN compare
MPMX19_01484 -1.7 -7.3 Flagellar basal-body rod protein FlgG compare
MPMX19_05679 -1.7 -9.9 Flagellum-specific ATP synthase compare
MPMX19_00862 -1.7 -8.2 hypothetical protein compare
MPMX19_02657 -1.6 -13.5 Glutamate synthase [NADPH] large chain compare
MPMX19_00705 -1.6 -3.2 Cell division coordinator CpoB compare
MPMX19_02268 -1.6 -3.5 hypothetical protein compare
MPMX19_05068 -1.6 -3.3 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA compare
MPMX19_02084 -1.6 -2.3 hypothetical protein compare
MPMX19_04362 -1.6 -2.6 Cytidine deaminase compare
MPMX19_04952 -1.6 -2.7 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_00262 -1.5 -2.2 Thiazole synthase compare
MPMX19_04000 -1.5 -4.0 Flagellar motor switch protein FliG compare
MPMX19_01610 -1.5 -2.5 ATP-dependent DNA helicase PcrA compare
MPMX19_02664 -1.5 -1.7 Arabinose 5-phosphate isomerase KdsD compare
MPMX19_05044 -1.5 -2.4 hypothetical protein compare
MPMX19_04218 -1.5 -5.4 Protein phosphatase PrpC compare
MPMX19_01395 -1.5 -2.0 hypothetical protein compare
MPMX19_05442 -1.5 -3.0 Ribosomal large subunit pseudouridine synthase D compare
MPMX19_01495 -1.5 -2.7 hypothetical protein compare
MPMX19_00167 -1.5 -1.9 hypothetical protein compare
MPMX19_03859 -1.4 -3.1 hypothetical protein compare
MPMX19_02981 -1.4 -5.1 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_01084 -1.4 -4.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_04094 -1.4 -7.7 Flagellar M-ring protein compare
MPMX19_06381 -1.4 -1.9 putative manganese efflux pump MntP compare
MPMX19_02658 -1.4 -9.1 Glutamate synthase [NADPH] small chain compare
MPMX19_05678 -1.4 -6.0 hypothetical protein compare
MPMX19_00304 -1.3 -2.9 Phosphatidylcholine synthase compare
MPMX19_00867 -1.3 -9.8 Flagellar biosynthetic protein FlhB compare
MPMX19_02987 -1.3 -2.5 hypothetical protein compare
MPMX19_01059 -1.3 -1.6 hypothetical protein compare
MPMX19_00863 -1.3 -6.4 Flagellar basal-body rod protein FlgC compare
MPMX19_01545 -1.3 -1.6 Lon protease compare
MPMX19_04171 -1.3 -2.0 16S ribosomal RNA compare
MPMX19_03724 -1.2 -1.5 hypothetical protein compare
MPMX19_04114 -1.2 -2.8 hypothetical protein compare
MPMX19_04869 -1.2 -4.2 DNA polymerase I compare
MPMX19_00714 -1.2 -5.5 Ferrous-iron efflux pump FieF compare
MPMX19_05387 -1.2 -2.5 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
MPMX19_06266 -1.2 -1.8 hypothetical protein compare
MPMX19_00846 -1.2 -2.4 hypothetical protein compare
MPMX19_01014 -1.2 -4.1 Indole-3-glycerol phosphate synthase compare
MPMX19_05224 -1.2 -2.7 hypothetical protein compare
MPMX19_00129 -1.2 -1.5 hypothetical protein compare
MPMX19_04089 -1.1 -8.4 Flagellar biosynthesis protein FlhA compare
MPMX19_00906 -1.1 -7.9 Amidophosphoribosyltransferase compare
MPMX19_05014 -1.1 -2.1 Cytochrome c1 compare
MPMX19_04222 -1.1 -8.5 hypothetical protein compare
MPMX19_01560 -1.1 -2.8 3'-5' exonuclease DinG compare
MPMX19_00695 -1.1 -2.6 putative transcriptional regulatory protein compare
MPMX19_00311 -1.1 -9.1 hypothetical protein compare
MPMX19_03654 -1.1 -2.6 Fructokinase compare
MPMX19_06644 -1.1 -8.9 GDP-mannose 4,6-dehydratase compare
MPMX19_01235 -1.1 -2.2 hypothetical protein compare
MPMX19_06327 -1.1 -1.3 hypothetical protein compare
MPMX19_03635 -1.1 -1.3 DNA-binding transcriptional activator DecR compare
MPMX19_00126 -1.1 -2.2 hypothetical protein compare
MPMX19_00020 -1.1 -1.3 hypothetical protein compare
MPMX19_02031 -1.1 -2.0 tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ compare
MPMX19_03787 -1.1 -2.0 hypothetical protein compare
MPMX19_00139 -1.0 -3.5 hypothetical protein compare
MPMX19_00503 -1.0 -3.5 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MPMX19_05727 -1.0 -5.0 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_00839 -1.0 -1.9 hypothetical protein compare
MPMX19_03976 -1.0 -3.6 hypothetical protein compare
MPMX19_01883 -1.0 -4.9 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_04430 -1.0 -2.9 hypothetical protein compare
MPMX19_05714 -1.0 -5.7 hypothetical protein compare
MPMX19_04199 -1.0 -5.0 Pseudaminic acid synthase compare
MPMX19_00854 -1.0 -8.4 hypothetical protein compare
MPMX19_04210 -1.0 -1.5 hypothetical protein compare
MPMX19_04466 -0.9 -3.0 hypothetical protein compare
MPMX19_06044 -0.9 -1.7 hypothetical protein compare
MPMX19_03609 -0.9 -2.3 HTH-type transcriptional repressor NagR compare
MPMX19_04200 -0.9 -4.5 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase compare
MPMX19_03252 -0.9 -2.9 hypothetical protein compare
MPMX19_00237 -0.9 -2.9 Cysteine synthase compare
MPMX19_05119 -0.9 -6.6 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_01111 -0.9 -2.3 Sensory histidine kinase/phosphatase NtrB compare
MPMX19_01400 -0.9 -1.9 hypothetical protein compare
MPMX19_00148 -0.9 -1.7 hypothetical protein compare
MPMX19_02320 -0.9 -1.6 HTH-type transcriptional regulator GltR compare
MPMX19_02235 -0.9 -2.2 tRNA-Ala compare
MPMX19_01304 -0.9 -5.6 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_02675 -0.9 -6.8 Phosphoenolpyruvate-dependent phosphotransferase system compare
MPMX19_05438 -0.9 -2.1 hypothetical protein compare
MPMX19_03450 -0.9 -0.9 hypothetical protein compare
MPMX19_06930 -0.9 -0.9 Sensor kinase CckA compare
MPMX19_02851 -0.9 -2.6 hypothetical protein compare
MPMX19_06399 -0.9 -2.1 hypothetical protein compare
MPMX19_01777 -0.9 -2.3 2-aminoadipate transaminase compare
MPMX19_00609 -0.8 -2.6 Chemotaxis protein CheY compare
MPMX19_01494 -0.8 -4.4 Flagellar P-ring protein compare
MPMX19_02543 -0.8 -1.5 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_04779 -0.8 -2.2 hypothetical protein compare
MPMX19_06734 -0.8 -7.1 Alginate biosynthesis protein AlgA compare
MPMX19_00841 -0.8 -1.4 Holo-[acyl-carrier-protein] synthase compare
MPMX19_04647 -0.8 -2.2 hypothetical protein compare
MPMX19_01485 -0.8 -5.2 hypothetical protein compare
MPMX19_04958 -0.8 -1.8 Methyl-accepting chemotaxis protein compare
MPMX19_04258 -0.8 -2.9 hypothetical protein compare
MPMX19_04948 -0.8 -1.6 HTH-type transcriptional regulator GltR compare
MPMX19_00184 -0.8 -2.9 hypothetical protein compare
MPMX19_03197 -0.8 -1.7 hypothetical protein compare
MPMX19_04208 -0.8 -2.0 flagellum biosynthesis repressor protein FlbT compare
MPMX19_05915 -0.8 -2.0 Flagellar M-ring protein compare
MPMX19_03771 -0.8 -1.8 hypothetical protein compare
MPMX19_06577 -0.8 -5.5 hypothetical protein compare
MPMX19_05205 -0.8 -2.1 hypothetical protein compare
MPMX19_01718 -0.8 -1.7 Ribosomal large subunit pseudouridine synthase C compare
MPMX19_04205 -0.8 -2.6 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_02737 -0.7 -3.3 Tryptophan synthase alpha chain compare
MPMX19_01796 -0.7 -1.4 hypothetical protein compare
MPMX19_06545 -0.7 -6.3 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase compare
MPMX19_03798 -0.7 -1.5 hypothetical protein compare
MPMX19_02580 -0.7 -1.6 Acetyltransferase compare
MPMX19_01148 -0.7 -3.4 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase compare
MPMX19_02105 -0.7 -1.9 hypothetical protein compare
MPMX19_06382 -0.7 -2.0 putative MFS-type transporter YfcJ compare
MPMX19_02911 -0.7 -2.2 hypothetical protein compare
MPMX19_00050 -0.7 -2.3 Pyridoxal phosphate homeostasis protein compare
MPMX19_06544 -0.7 -5.6 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) compare
MPMX19_01496 -0.7 -3.9 hypothetical protein compare
MPMX19_00864 -0.7 -2.6 Flagellar hook-basal body complex protein FliE compare
MPMX19_04391 -0.7 -4.1 Homoserine O-acetyltransferase compare
MPMX19_05271 -0.7 -1.6 hypothetical protein compare
MPMX19_01714 -0.7 -1.2 tRNA-modifying protein YgfZ compare
MPMX19_06581 -0.7 -5.0 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 2 compare
MPMX19_02980 -0.7 -1.3 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_00133 -0.7 -4.4 hypothetical protein compare
MPMX19_02706 -0.7 -2.1 hypothetical protein compare
MPMX19_02962 -0.7 -2.8 hypothetical protein compare
MPMX19_02392 -0.7 -5.7 Aspartate/prephenate aminotransferase compare
MPMX19_00170 -0.7 -2.2 hypothetical protein compare
MPMX19_02581 -0.7 -2.7 HTH-type transcriptional regulator SutR compare
MPMX19_01998 -0.7 -3.0 3-isopropylmalate dehydratase large subunit compare
MPMX19_00712 -0.7 -3.2 hypothetical protein compare
MPMX19_06738 -0.7 -2.6 Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha compare
MPMX19_05362 -0.7 -1.4 hypothetical protein compare
MPMX19_00475 -0.7 -1.4 hypothetical protein compare
MPMX19_06929 -0.7 -2.1 hypothetical protein compare
MPMX19_02905 -0.7 -1.4 hypothetical protein compare
MPMX19_06700 -0.7 -1.0 Copper-sensing transcriptional repressor RicR compare
MPMX19_01845 -0.7 -3.0 hypothetical protein compare
MPMX19_03575 -0.7 -2.0 HTH-type transcriptional regulator NimR compare
MPMX19_05601 -0.7 -2.0 putative ABC transporter ATP-binding protein YejF compare
MPMX19_01497 -0.7 -2.4 hypothetical protein compare
MPMX19_04732 -0.7 -2.5 hypothetical protein compare
MPMX19_01113 -0.7 -1.4 Adaptive-response sensory-kinase SasA compare
MPMX19_03251 -0.7 -2.6 hypothetical protein compare
MPMX19_03282 -0.7 -2.6 HTH-type transcriptional regulator McbR compare
MPMX19_00680 -0.6 -1.4 Elongation factor P--(R)-beta-lysine ligase compare
MPMX19_00260 -0.6 -1.3 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_02979 -0.6 -2.5 Hydrogen cyanide synthase subunit HcnB compare
MPMX19_06253 -0.6 -1.1 hypothetical protein compare
MPMX19_01912 -0.6 -1.8 Acetyl-CoA acetyltransferase compare
MPMX19_01884 -0.6 -1.8 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_02298 -0.6 -1.7 hypothetical protein compare
MPMX19_04390 -0.6 -1.6 hypothetical protein compare
MPMX19_03306 -0.6 -2.0 hypothetical protein compare
MPMX19_06315 -0.6 -1.1 ISL3 family transposase ISAli18 compare
MPMX19_00912 -0.6 -4.5 Bifunctional uridylyltransferase/uridylyl-removing enzyme compare
MPMX19_03141 -0.6 -1.1 hypothetical protein compare
MPMX19_03087 -0.6 -2.0 Protein FecR compare
MPMX19_05220 -0.6 -1.6 hypothetical protein compare
MPMX19_00149 -0.6 -2.6 hypothetical protein compare
MPMX19_02946 -0.6 -2.4 Ribulose-phosphate 3-epimerase compare
MPMX19_06267 -0.6 -2.0 hypothetical protein compare
MPMX19_03421 -0.6 -1.5 hypothetical protein compare
MPMX19_02736 -0.6 -4.0 Tryptophan synthase beta chain compare
MPMX19_03321 -0.6 -3.4 hypothetical protein compare
MPMX19_06271 -0.6 -4.2 hypothetical protein compare
MPMX19_02378 -0.6 -1.4 hypothetical protein compare
MPMX19_00320 -0.6 -1.8 hypothetical protein compare
MPMX19_01939 -0.6 -2.2 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
MPMX19_03707 -0.6 -1.1 L-cystine import ATP-binding protein TcyC compare
MPMX19_06337 -0.6 -2.0 Arsenic resistance transcriptional regulator ArsR1 compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in mixed community experiments

For mixed community Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum across organisms