Experiment set1S437 for Phocaeicola dorei CL03T12C01

Compare to:

Mucin from porcine stomach type III carbon source

200 most important genes:

  gene name fitness t score description  
ABI39_RS12415 -5.1 -4.9 biotin/lipoyl-binding protein compare
ABI39_RS16895 -4.7 -3.2 NADH:ubiquinone reductase (Na(+)-transporting) subunit F compare
ABI39_RS19385 -4.4 -4.1 hypothetical protein compare
ABI39_RS18745 -4.3 -7.7 pyruvate:ferredoxin (flavodoxin) oxidoreductase compare
ABI39_RS04795 -3.9 -2.8 M28 family peptidase compare
ABI39_RS12420 -3.7 -7.4 OadG family protein compare
ABI39_RS12425 -3.6 -9.6 acyl-CoA carboxylase subunit beta compare
ABI39_RS04860 -3.6 -5.1 HigA family addiction module antidote protein compare
ABI39_RS13180 -3.5 -6.6 FAD:protein FMN transferase compare
ABI39_RS12770 -3.4 -4.0 hypothetical protein compare
ABI39_RS11140 -3.3 -2.0 undecaprenyl-phosphate glucose phosphotransferase compare
ABI39_RS01650 -3.3 -7.9 methylmalonyl-CoA mutase small subunit compare
ABI39_RS02755 -3.2 -4.4 glycosyltransferase compare
ABI39_RS01655 -3.1 -9.3 methylmalonyl-CoA mutase compare
ABI39_RS17950 -3.0 -3.3 Crp/Fnr family transcriptional regulator compare
ABI39_RS17160 -2.9 -3.9 VWA domain-containing protein compare
ABI39_RS18910 -2.9 -2.0 preprotein translocase subunit YajC compare
ABI39_RS12430 -2.8 -1.7 methylmalonyl-CoA epimerase compare
ABI39_RS06440 -2.7 -1.7 hypothetical protein compare
ABI39_RS16870 -2.6 -4.5 Na(+)-translocating NADH-quinone reductase subunit A compare
ABI39_RS04950 -2.6 -3.1 DEAD/DEAH box helicase compare
ABI39_RS17170 -2.5 -3.7 protein BatD compare
ABI39_RS20070 -2.5 -8.4 UDP-glucose 4-epimerase GalE compare
ABI39_RS09845 -2.5 -2.4 (d)CMP kinase compare
ABI39_RS18740 -2.5 -6.5 ATP-binding protein compare
ABI39_RS16040 -2.5 -1.5 hypothetical protein compare
ABI39_RS16875 -2.4 -3.8 NADH:ubiquinone reductase (Na(+)-transporting) subunit B compare
ABI39_RS14560 -2.4 -3.6 aspartate 1-decarboxylase compare
ABI39_RS20095 -2.4 -12.6 RnfABCDGE type electron transport complex subunit D compare
ABI39_RS13185 -2.3 -1.8 manganese efflux pump compare
ABI39_RS00410 -2.3 -3.1 response regulator compare
ABI39_RS20090 -2.3 -7.4 RnfABCDGE type electron transport complex subunit G compare
ABI39_RS20080 -2.2 -8.2 electron transport complex subunit RsxA compare
ABI39_RS20085 -2.2 -9.5 electron transport complex subunit E compare
ABI39_RS09685 -2.1 -2.2 hypothetical protein compare
ABI39_RS13835 -2.0 -3.4 DUF3037 domain-containing protein compare
ABI39_RS20100 -2.0 -8.1 electron transport complex subunit RsxC compare
ABI39_RS17150 -1.9 -3.0 hypothetical protein compare
ABI39_RS06920 -1.9 -5.9 glycosyltransferase compare
ABI39_RS16885 -1.9 -3.0 NADH:ubiquinone reductase (Na(+)-transporting) subunit D compare
ABI39_RS02290 -1.9 -3.4 hypothetical protein compare
ABI39_RS16315 -1.8 -1.4 conjugative transposon protein TraK compare
ABI39_RS16880 -1.8 -3.1 Na(+)-translocating NADH-quinone reductase subunit C compare
ABI39_RS17140 -1.7 -3.3 AAA family ATPase compare
ABI39_RS15415 -1.7 -5.6 hypothetical protein compare
ABI39_RS11655 -1.7 -3.7 MFS transporter compare
ABI39_RS09515 -1.7 -2.5 nucleoside deaminase compare
ABI39_RS00090 -1.7 -4.5 HAMP domain-containing histidine kinase compare
ABI39_RS19985 -1.6 -2.5 pyridoxal phosphate-dependent aminotransferase compare
ABI39_RS08305 -1.6 -6.3 DUF4831 family protein compare
ABI39_RS06675 -1.6 -6.4 2-oxoacid:ferredoxin oxidoreductase subunit beta compare
ABI39_RS08195 -1.6 -6.4 hypothetical protein compare
ABI39_RS20105 -1.6 -4.9 Fe-S cluster domain-containing protein compare
ABI39_RS09830 -1.6 -8.4 methylmalonyl Co-A mutase-associated GTPase MeaB compare
ABI39_RS08035 -1.6 -3.7 adenylosuccinate lyase compare
ABI39_RS06010 -1.6 -4.8 polysaccharide deacetylase family protein compare
ABI39_RS02285 -1.5 -1.7 DNA mismatch repair endonuclease MutL compare
ABI39_RS15840 -1.5 -3.8 hypothetical protein compare
ABI39_RS18330 -1.5 -5.8 PD40 domain-containing protein compare
ABI39_RS03170 -1.5 -1.5 plasmid mobilization relaxosome protein MobC compare
ABI39_RS18160 -1.5 -7.4 MFS transporter compare
ABI39_RS10110 -1.5 -7.0 S9 family peptidase compare
ABI39_RS15410 -1.5 -6.5 DUF4296 domain-containing protein compare
ABI39_RS06380 -1.5 -4.2 GH3 auxin-responsive promoter family protein compare
ABI39_RS11670 -1.5 -2.7 molecular chaperone DnaJ compare
ABI39_RS10640 -1.5 -8.1 serine dehydratase subunit alpha family protein compare
ABI39_RS04230 -1.5 -3.4 RNA polymerase factor sigma-54 compare
ABI39_RS17640 -1.4 -3.7 YebC/PmpR family DNA-binding transcriptional regulator compare
ABI39_RS14510 -1.4 -3.7 3'-5' exonuclease compare
ABI39_RS14890 -1.4 -1.3 tRNA-Asp compare
ABI39_RS01360 -1.4 -4.9 hypothetical protein compare
ABI39_RS03830 -1.4 -1.0 ribosome-associated translation inhibitor RaiA compare
ABI39_RS06995 -1.4 -5.5 tetratricopeptide repeat protein compare
ABI39_RS17315 -1.3 -7.1 alpha amylase C-terminal domain-containing protein compare
ABI39_RS06670 -1.3 -7.9 2-oxoacid:acceptor oxidoreductase subunit alpha compare
ABI39_RS02470 -1.3 -2.7 ATP-dependent DNA helicase RecG compare
ABI39_RS12170 -1.3 -1.2 MarR family transcriptional regulator compare
ABI39_RS12645 -1.3 -9.6 chorismate synthase compare
ABI39_RS04970 -1.3 -3.0 Holliday junction branch migration DNA helicase RuvB compare
ABI39_RS20060 -1.3 -7.0 YitT family protein compare
ABI39_RS04145 -1.3 -1.9 transcription elongation factor GreA compare
ABI39_RS21650 -1.2 -2.4 phage integrase SAM-like domain-containing protein compare
ABI39_RS04280 -1.2 -4.8 DUF4292 domain-containing protein compare
ABI39_RS14230 -1.2 -8.5 alpha-amylase compare
ABI39_RS09850 -1.2 -2.4 energy transducer TonB compare
ABI39_RS09575 -1.2 -2.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
ABI39_RS17130 -1.2 -1.2 HU family DNA-binding protein compare
ABI39_RS15265 -1.2 -2.3 crossover junction endodeoxyribonuclease RuvC compare
ABI39_RS05660 -1.2 -5.5 acetyl-CoA hydrolase/transferase family protein compare
ABI39_RS05405 -1.2 -6.8 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
ABI39_RS17320 -1.2 -1.7 YhcH/YjgK/YiaL family protein compare
ABI39_RS20395 -1.2 -3.4 DedA family protein compare
ABI39_RS11690 -1.2 -4.5 cytidine deaminase compare
ABI39_RS18345 -1.2 -6.8 nucleoside phosphorylase compare
ABI39_RS20140 -1.2 -3.5 copper homeostasis protein CutC compare
ABI39_RS05655 -1.2 -2.7 hypothetical protein compare
ABI39_RS11975 -1.1 -1.6 polysaccharide export protein compare
ABI39_RS15855 -1.1 -2.3 helix-turn-helix transcriptional regulator compare
ABI39_RS13000 -1.1 -2.9 sigma-54-dependent Fis family transcriptional regulator compare
ABI39_RS10450 -1.1 -3.9 ABC transporter ATP-binding protein compare
ABI39_RS13225 -1.1 -2.2 phosphopyruvate hydratase compare
ABI39_RS05430 -1.1 -5.8 deoxyribose-phosphate aldolase compare
ABI39_RS00520 -1.1 -5.0 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
ABI39_RS12970 -1.1 -4.9 CDP-alcohol phosphatidyltransferase family protein compare
ABI39_RS05280 -1.0 -6.0 S41 family peptidase compare
ABI39_RS09280 -1.0 -1.9 16S rRNA (cytidine(1402)-2'-O)-methyltransferase compare
ABI39_RS02480 -1.0 -2.7 DJ-1/PfpI family protein compare
ABI39_RS02060 -1.0 -6.2 translocation/assembly module TamB domain-containing protein compare
ABI39_RS15320 -1.0 -6.2 PorT family protein compare
ABI39_RS16220 -1.0 -2.5 immunity 17 family protein compare
ABI39_RS14220 -1.0 -6.1 glycogen debranching enzyme N-terminal domain-containing protein compare
ABI39_RS19950 -1.0 -2.4 diaminopimelate decarboxylase compare
ABI39_RS17310 -1.0 -7.0 hypothetical protein compare
ABI39_RS04695 -1.0 -3.1 shikimate kinase compare
ABI39_RS12780 -1.0 -2.6 type III pantothenate kinase compare
ABI39_RS05650 -1.0 -4.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB compare
ABI39_RS19625 -1.0 -1.0 hypothetical protein compare
ABI39_RS12150 -1.0 -3.1 hotdog fold thioesterase compare
ABI39_RS18310 -1.0 -1.6 DMT family protein compare
ABI39_RS11735 -1.0 -2.9 HlyD family efflux transporter periplasmic adaptor subunit compare
ABI39_RS00515 -1.0 -1.9 hypothetical protein compare
ABI39_RS04700 -0.9 -2.4 type I DNA topoisomerase compare
ABI39_RS14225 -0.9 -5.0 glycosyltransferase compare
ABI39_RS13265 -0.9 -2.2 hypothetical protein compare
ABI39_RS10460 -0.9 -3.8 ABC transporter substrate-binding protein compare
ABI39_RS22955 -0.9 -2.0 hypothetical protein compare
ABI39_RS19775 -0.9 -1.3 tRNA-Met compare
ABI39_RS02040 -0.9 -4.5 zinc metallopeptidase compare
ABI39_RS00105 -0.9 -0.9 hypothetical protein compare
ABI39_RS16305 -0.9 -0.8 DUF4141 domain-containing protein compare
ABI39_RS17180 -0.9 -4.9 phosphatase PAP2 family protein compare
ABI39_RS06620 -0.9 -2.2 HU family DNA-binding protein compare
ABI39_RS16915 -0.9 -6.5 DUF1015 domain-containing protein compare
ABI39_RS06925 -0.9 -5.0 glycosyltransferase compare
ABI39_RS20110 -0.9 -1.3 SoxR reducing system RseC family protein compare
ABI39_RS18300 -0.8 -3.0 bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase compare
ABI39_RS20855 -0.8 -1.4 hypothetical protein compare
ABI39_RS10475 -0.8 -7.1 TonB-dependent receptor compare
ABI39_RS08510 -0.8 -2.3 NADH-quinone oxidoreductase subunit NuoK compare
ABI39_RS00240 -0.8 -2.5 NigD-like N-terminal domain-containing protein compare
ABI39_RS02845 -0.8 -3.7 RluA family pseudouridine synthase compare
ABI39_RS15770 -0.8 -0.9 hypothetical protein compare
ABI39_RS11650 -0.8 -4.6 galactokinase compare
ABI39_RS16700 -0.8 -3.2 agmatine deiminase family protein compare
ABI39_RS09935 -0.8 -3.8 DNA topoisomerase 3 compare
ABI39_RS08900 -0.8 -1.1 hypothetical protein compare
ABI39_RS15400 -0.8 -4.2 TraR/DksA C4-type zinc finger protein compare
ABI39_RS11385 -0.8 -2.1 copper resistance protein NlpE N-terminal domain-containing protein compare
ABI39_RS10470 -0.8 -5.8 hypothetical protein compare
ABI39_RS17790 -0.8 -1.1 hypothetical protein compare
ABI39_RS04930 -0.8 -2.4 helix-turn-helix transcriptional regulator compare
ABI39_RS16475 -0.8 -2.6 UDP-glucose/GDP-mannose dehydrogenase family protein compare
ABI39_RS03880 -0.8 -5.7 PDZ domain-containing protein compare
ABI39_RS19105 -0.8 -1.8 aldo/keto reductase compare
ABI39_RS01725 -0.8 -1.8 electron transfer flavoprotein subunit beta/FixA family protein compare
ABI39_RS04240 -0.8 -3.2 glycine cleavage system protein GcvH compare
ABI39_RS02530 -0.8 -1.2 winged helix-turn-helix domain-containing protein compare
ABI39_RS06625 -0.8 -1.9 rhomboid family intramembrane serine protease compare
ABI39_RS15820 -0.8 -1.2 hypothetical protein compare
ABI39_RS04545 -0.8 -1.9 LysO family transporter compare
ABI39_RS16910 -0.8 -5.1 3-phosphoglycerate dehydrogenase compare
ABI39_RS06065 -0.8 -1.7 RNA methyltransferase compare
ABI39_RS13195 -0.8 -2.0 hypothetical protein compare
ABI39_RS06485 -0.7 -2.0 acyl carrier protein compare
ABI39_RS12980 -0.7 -1.9 HAD family hydrolase compare
ABI39_RS20420 -0.7 -4.6 undecaprenyl-phosphate glucose phosphotransferase compare
ABI39_RS15610 -0.7 -0.9 acetyl-CoA carboxylase biotin carboxylase subunit compare
ABI39_RS08875 -0.7 -1.5 hypothetical protein compare
ABI39_RS04560 -0.7 -5.5 glycoside hydrolase compare
ABI39_RS06390 -0.7 -4.0 DUF3108 domain-containing protein compare
ABI39_RS20220 -0.7 -1.9 DNA-binding protein compare
ABI39_RS23150 -0.7 -0.9 S26 family signal peptidase compare
ABI39_RS09825 -0.7 -1.5 DUF1573 domain-containing protein compare
ABI39_RS11040 -0.7 -4.9 DUF1972 domain-containing protein compare
ABI39_RS06655 -0.7 -4.3 NAD-dependent epimerase/dehydratase family protein compare
ABI39_RS10455 -0.7 -4.4 iron ABC transporter permease compare
ABI39_RS01730 -0.7 -2.9 electron transfer flavoprotein subunit alpha/FixB family protein compare
ABI39_RS07725 -0.7 -2.5 porin family protein compare
ABI39_RS14235 -0.7 -2.0 hypothetical protein compare
ABI39_RS21350 -0.7 -0.9 aspartate--ammonia ligase compare
ABI39_RS01825 -0.7 -1.1 cyclodeaminase/cyclohydrolase family protein compare
ABI39_RS14715 -0.7 -3.0 RidA family protein compare
ABI39_RS14880 -0.7 -1.7 GNAT family N-acetyltransferase compare
ABI39_RS17940 -0.7 -4.9 hypothetical protein compare
ABI39_RS20405 -0.7 -2.7 GDP-L-fucose synthase compare
ABI39_RS12690 -0.7 -2.9 tRNA pseudouridine(38-40) synthase TruA compare
ABI39_RS09245 -0.7 -3.8 cardiolipin synthase compare
ABI39_RS21190 -0.7 -1.6 dihydrodipicolinate synthase family protein compare
ABI39_RS13150 -0.7 -2.8 S41 family peptidase compare
ABI39_RS04165 -0.7 -3.9 NAD-dependent deacylase compare
ABI39_RS11285 -0.7 -2.8 hypothetical protein compare
ABI39_RS05980 -0.7 -1.7 gluconate 5-dehydrogenase compare
ABI39_RS08555 -0.7 -2.5 Trk system potassium transporter TrkA compare
ABI39_RS18610 -0.7 -1.9 IS66 family insertion sequence element accessory protein TnpB compare
ABI39_RS16115 -0.7 -2.5 DUF1896 domain-containing protein compare
ABI39_RS20355 -0.7 -4.9 carboxypeptidase-like regulatory domain-containing protein compare
ABI39_RS09680 -0.7 -4.7 DUF3822 family protein compare
ABI39_RS18170 -0.7 -0.9 hypothetical protein compare
ABI39_RS12665 -0.7 -2.8 shikimate dehydrogenase compare
ABI39_RS08850 -0.7 -1.6 toprim domain-containing protein compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Mucin from porcine stomach type III in Phocaeicola dorei CL03T12C01

For carbon source Mucin from porcine stomach type III across organisms