Experiment set1S432 for Phocaeicola dorei CL03T12C01

Compare to:

Fructose-6-phosphate carbon source

200 most important genes:

  gene name fitness t score description  
ABI39_RS02870 -6.7 -4.6 acetylornithine carbamoyltransferase compare
ABI39_RS07790 -6.2 -6.0 M20 family metallo-hydrolase compare
ABI39_RS02975 -6.0 -7.1 argininosuccinate synthase compare
ABI39_RS04685 -5.9 -7.0 acetylglutamate kinase compare
ABI39_RS07095 -5.6 -13.5 argininosuccinate lyase compare
ABI39_RS02980 -5.4 -6.5 N-acetyltransferase compare
ABI39_RS02970 -5.4 -5.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABI39_RS02880 -5.4 -8.2 glutamate 5-kinase compare
ABI39_RS08230 -5.0 -9.1 MFS transporter compare
ABI39_RS16910 -5.0 -7.7 3-phosphoglycerate dehydrogenase compare
ABI39_RS02875 -5.0 -8.4 glutamate-5-semialdehyde dehydrogenase compare
ABI39_RS05660 -5.0 -5.9 acetyl-CoA hydrolase/transferase family protein compare
ABI39_RS08235 -4.7 -8.5 carbohydrate kinase compare
ABI39_RS10440 -4.6 -6.9 threonine synthase compare
ABI39_RS10430 -4.6 -9.8 bifunctional aspartate kinase/homoserine dehydrogenase I compare
ABI39_RS11835 -4.5 -3.1 histidinol dehydrogenase compare
ABI39_RS10510 -4.3 -6.6 prephenate dehydratase compare
ABI39_RS10495 -4.3 -5.7 prephenate dehydrogenase compare
ABI39_RS02775 -4.2 -12.1 ATPase compare
ABI39_RS10435 -4.2 -7.5 cofactor-independent phosphoglycerate mutase compare
ABI39_RS21065 -4.2 -6.4 indole-3-glycerol phosphate synthase TrpC compare
ABI39_RS21075 -4.1 -5.7 tryptophan synthase subunit alpha compare
ABI39_RS04695 -4.1 -4.9 shikimate kinase compare
ABI39_RS12645 -4.0 -9.4 chorismate synthase compare
ABI39_RS10260 -4.0 -7.0 adenylosuccinate synthase compare
ABI39_RS07005 -3.8 -3.7 type II 3-dehydroquinate dehydratase compare
ABI39_RS12665 -3.8 -3.7 shikimate dehydrogenase compare
ABI39_RS21060 -3.8 -6.8 anthranilate phosphoribosyltransferase compare
ABI39_RS07835 -3.7 -7.4 alkaline phosphatase compare
ABI39_RS16905 -3.7 -8.2 3-phosphoserine/phosphohydroxythreonine transaminase compare
ABI39_RS11840 -3.7 -3.6 histidinol-phosphate transaminase compare
ABI39_RS12735 -3.6 -6.1 ketol-acid reductoisomerase compare
ABI39_RS11830 -3.6 -3.5 ATP phosphoribosyltransferase compare
ABI39_RS10500 -3.5 -3.4 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase type II compare
ABI39_RS12720 -3.5 -9.4 biosynthetic-type acetolactate synthase large subunit compare
ABI39_RS08240 -3.5 -11.0 substrate-binding domain-containing protein compare
ABI39_RS19925 -3.5 -6.3 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABI39_RS12675 -3.5 -4.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABI39_RS10215 -3.4 -7.3 3-isopropylmalate dehydrogenase compare
ABI39_RS12420 -3.4 -4.6 OadG family protein compare
ABI39_RS19385 -3.4 -2.3 hypothetical protein compare
ABI39_RS11845 -3.4 -4.6 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
ABI39_RS12430 -3.3 -1.8 methylmalonyl-CoA epimerase compare
ABI39_RS19930 -3.2 -5.4 imidazole glycerol phosphate synthase subunit HisF compare
ABI39_RS10195 -3.2 -8.1 2-isopropylmalate synthase compare
ABI39_RS06055 -3.2 -5.3 phosphoribosylamine--glycine ligase compare
ABI39_RS01655 -3.0 -6.8 methylmalonyl-CoA mutase compare
ABI39_RS00770 -3.0 -10.6 pyridoxal phosphate-dependent aminotransferase compare
ABI39_RS10200 -3.0 -9.0 3-isopropylmalate dehydratase large subunit compare
ABI39_RS16040 -2.9 -1.5 hypothetical protein compare
ABI39_RS06675 -2.9 -5.1 2-oxoacid:ferredoxin oxidoreductase subunit beta compare
ABI39_RS02785 -2.9 -13.7 hypothetical protein compare
ABI39_RS10205 -2.8 -4.7 3-isopropylmalate dehydratase small subunit compare
ABI39_RS06670 -2.8 -9.6 2-oxoacid:acceptor oxidoreductase subunit alpha compare
ABI39_RS12715 -2.8 -9.0 dihydroxy-acid dehydratase compare
ABI39_RS02960 -2.7 -8.0 pyrroline-5-carboxylate reductase compare
ABI39_RS14560 -2.6 -2.5 aspartate 1-decarboxylase compare
ABI39_RS19935 -2.5 -4.3 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
ABI39_RS06995 -2.5 -5.0 tetratricopeptide repeat protein compare
ABI39_RS12425 -2.5 -7.1 acyl-CoA carboxylase subunit beta compare
ABI39_RS04795 -2.5 -1.7 M28 family peptidase compare
ABI39_RS02315 -2.4 -5.5 IMP dehydrogenase compare
ABI39_RS13835 -2.3 -2.2 DUF3037 domain-containing protein compare
ABI39_RS08195 -2.3 -4.2 hypothetical protein compare
ABI39_RS21045 -2.2 -3.9 tryptophan synthase subunit beta compare
ABI39_RS01650 -2.2 -5.1 methylmalonyl-CoA mutase small subunit compare
ABI39_RS21050 -2.1 -2.9 anthranilate synthase component I family protein compare
ABI39_RS09575 -2.1 -1.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
ABI39_RS10210 -2.1 -5.6 2-isopropylmalate synthase compare
ABI39_RS10505 -2.1 -6.6 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
ABI39_RS20965 -2.1 -2.0 SPOR domain-containing protein compare
ABI39_RS10640 -2.0 -7.2 serine dehydratase subunit alpha family protein compare
ABI39_RS10110 -2.0 -6.4 S9 family peptidase compare
ABI39_RS07090 -1.9 -1.4 hypothetical protein compare
ABI39_RS18330 -1.8 -5.7 PD40 domain-containing protein compare
ABI39_RS18745 -1.8 -2.2 pyruvate:ferredoxin (flavodoxin) oxidoreductase compare
ABI39_RS19985 -1.8 -1.5 pyridoxal phosphate-dependent aminotransferase compare
ABI39_RS04230 -1.8 -1.7 RNA polymerase factor sigma-54 compare
ABI39_RS14890 -1.8 -1.3 tRNA-Asp compare
ABI39_RS04245 -1.8 -1.6 5-(carboxyamino)imidazole ribonucleotide mutase compare
ABI39_RS00405 -1.7 -10.0 phosphoribosylformylglycinamidine synthase compare
ABI39_RS17420 -1.7 -4.9 serine hydroxymethyltransferase compare
ABI39_RS15820 -1.7 -2.0 hypothetical protein compare
ABI39_RS15430 -1.7 -1.2 hypothetical protein compare
ABI39_RS17140 -1.7 -1.1 AAA family ATPase compare
ABI39_RS08305 -1.6 -4.2 DUF4831 family protein compare
ABI39_RS19615 -1.6 -1.6 hypothetical protein compare
ABI39_RS00090 -1.6 -1.9 HAMP domain-containing histidine kinase compare
ABI39_RS00475 -1.6 -2.5 phosphoribosylformylglycinamidine cyclo-ligase compare
ABI39_RS05175 -1.6 -3.4 4-hydroxy-tetrahydrodipicolinate reductase compare
ABI39_RS14510 -1.5 -2.3 3'-5' exonuclease compare
ABI39_RS07890 -1.5 -1.4 hypothetical protein compare
ABI39_RS02500 -1.5 -5.6 pyridoxine 5'-phosphate synthase compare
ABI39_RS06620 -1.5 -2.5 HU family DNA-binding protein compare
ABI39_RS15665 -1.5 -3.7 pyridoxal phosphate-dependent class II aminotransferase compare
ABI39_RS10870 -1.5 -7.2 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD compare
ABI39_RS20105 -1.5 -4.2 Fe-S cluster domain-containing protein compare
ABI39_RS22955 -1.5 -2.2 hypothetical protein compare
ABI39_RS01735 -1.4 -4.1 acyl-CoA dehydrogenase family protein compare
ABI39_RS06250 -1.4 -7.2 4-phosphoerythronate dehydrogenase PdxB compare
ABI39_RS08220 -1.4 -5.5 TonB-dependent receptor compare
ABI39_RS00205 -1.4 -1.0 phosphoglucosamine mutase compare
ABI39_RS12725 -1.4 -2.7 acetolactate synthase small subunit compare
ABI39_RS15955 -1.4 -2.7 hypothetical protein compare
ABI39_RS01300 -1.4 -4.4 NADP-specific glutamate dehydrogenase compare
ABI39_RS01730 -1.4 -2.9 electron transfer flavoprotein subunit alpha/FixB family protein compare
ABI39_RS20080 -1.3 -4.1 electron transport complex subunit RsxA compare
ABI39_RS02780 -1.3 -2.7 phosphatase PAP2 family protein compare
ABI39_RS11670 -1.3 -0.9 molecular chaperone DnaJ compare
ABI39_RS02460 -1.3 -1.8 peptidoglycan DD-metalloendopeptidase family protein compare
ABI39_RS10650 -1.3 -7.4 AraC family transcriptional regulator compare
ABI39_RS20975 -1.3 -1.2 phage holin family protein compare
ABI39_RS20085 -1.3 -3.6 electron transport complex subunit E compare
ABI39_RS14060 -1.3 -1.1 hypothetical protein compare
ABI39_RS04930 -1.2 -2.0 helix-turn-helix transcriptional regulator compare
ABI39_RS14240 -1.2 -2.7 biotin synthase BioB compare
ABI39_RS01360 -1.2 -3.4 hypothetical protein compare
ABI39_RS14245 -1.2 -4.7 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
ABI39_RS17170 -1.2 -0.8 protein BatD compare
ABI39_RS23125 -1.2 -1.3 hypothetical protein compare
ABI39_RS04690 -1.2 -3.4 biosynthetic arginine decarboxylase compare
ABI39_RS18385 -1.2 -1.3 helix-turn-helix domain-containing protein compare
ABI39_RS04920 -1.2 -2.9 DUF2975 domain-containing protein compare
ABI39_RS15610 -1.2 -1.1 acetyl-CoA carboxylase biotin carboxylase subunit compare
ABI39_RS22175 -1.2 -1.1 N-acetylmuramoyl-L-alanine amidase compare
ABI39_RS13000 -1.2 -1.6 sigma-54-dependent Fis family transcriptional regulator compare
ABI39_RS19945 -1.2 -4.5 aspartate kinase compare
ABI39_RS11405 -1.2 -4.2 hypothetical protein compare
ABI39_RS14235 -1.2 -2.2 hypothetical protein compare
ABI39_RS18490 -1.1 -1.2 helix-turn-helix domain-containing protein compare
ABI39_RS17950 -1.1 -0.8 Crp/Fnr family transcriptional regulator compare
ABI39_RS20095 -1.1 -5.7 RnfABCDGE type electron transport complex subunit D compare
ABI39_RS04280 -1.1 -2.3 DUF4292 domain-containing protein compare
ABI39_RS12415 -1.1 -2.3 biotin/lipoyl-binding protein compare
ABI39_RS15400 -1.1 -4.6 TraR/DksA C4-type zinc finger protein compare
ABI39_RS02965 -1.1 -5.9 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme compare
ABI39_RS20090 -1.1 -4.2 RnfABCDGE type electron transport complex subunit G compare
ABI39_RS04860 -1.1 -2.9 HigA family addiction module antidote protein compare
ABI39_RS22135 -1.1 -1.5 type II toxin-antitoxin system RelE/ParE family toxin compare
ABI39_RS11940 -1.1 -5.7 saccharopine dehydrogenase family protein compare
ABI39_RS06245 -1.1 -1.3 glycosyltransferase family 9 protein compare
ABI39_RS18165 -1.1 -1.1 DUF5024 domain-containing protein compare
ABI39_RS22870 -1.0 -2.1 aldo/keto reductase compare
ABI39_RS15415 -1.0 -2.6 hypothetical protein compare
ABI39_RS14260 -1.0 -4.5 malonyl-ACP O-methyltransferase BioC compare
ABI39_RS17790 -1.0 -1.1 hypothetical protein compare
ABI39_RS13465 -1.0 -1.7 DUF3575 domain-containing protein compare
ABI39_RS14715 -1.0 -2.4 RidA family protein compare
ABI39_RS02755 -1.0 -0.7 glycosyltransferase compare
ABI39_RS15320 -1.0 -4.9 PorT family protein compare
ABI39_RS20110 -1.0 -1.7 SoxR reducing system RseC family protein compare
ABI39_RS20220 -1.0 -1.8 DNA-binding protein compare
ABI39_RS16695 -1.0 -4.0 carbon-nitrogen hydrolase compare
ABI39_RS09830 -1.0 -3.9 methylmalonyl Co-A mutase-associated GTPase MeaB compare
ABI39_RS09915 -1.0 -2.1 DUF5056 domain-containing protein compare
ABI39_RS17130 -1.0 -0.9 HU family DNA-binding protein compare
ABI39_RS15775 -1.0 -1.3 hypothetical protein compare
ABI39_RS18895 -0.9 -2.5 DUF5606 domain-containing protein compare
ABI39_RS01725 -0.9 -1.7 electron transfer flavoprotein subunit beta/FixA family protein compare
ABI39_RS16700 -0.9 -2.3 agmatine deiminase family protein compare
ABI39_RS06010 -0.9 -2.8 polysaccharide deacetylase family protein compare
ABI39_RS02070 -0.9 -1.2 SDR family oxidoreductase compare
ABI39_RS18740 -0.9 -1.8 ATP-binding protein compare
ABI39_RS19630 -0.9 -1.0 hypothetical protein compare
ABI39_RS19920 -0.9 -2.0 imidazole glycerol phosphate synthase subunit HisH compare
ABI39_RS18310 -0.9 -1.2 DMT family protein compare
ABI39_RS18910 -0.9 -0.6 preprotein translocase subunit YajC compare
ABI39_RS13170 -0.9 -5.1 Crp/Fnr family transcriptional regulator compare
ABI39_RS09290 -0.9 -1.9 YjjG family noncanonical pyrimidine nucleotidase compare
ABI39_RS12780 -0.9 -1.2 type III pantothenate kinase compare
ABI39_RS11930 -0.9 -1.5 recombinase RecA compare
ABI39_RS17965 -0.9 -1.4 YegS/Rv2252/BmrU family lipid kinase compare
ABI39_RS06725 -0.9 -1.6 hypothetical protein compare
ABI39_RS20100 -0.8 -3.2 electron transport complex subunit RsxC compare
ABI39_RS15515 -0.8 -3.8 precorrin-4 C(11)-methyltransferase compare
ABI39_RS13410 -0.8 -1.4 HU family DNA-binding protein compare
ABI39_RS08785 -0.8 -0.8 DUF3408 domain-containing protein compare
ABI39_RS19730 -0.8 -1.3 hypothetical protein compare
ABI39_RS16285 -0.8 -1.4 hypothetical protein compare
ABI39_RS18205 -0.8 -1.5 class I SAM-dependent methyltransferase compare
ABI39_RS02055 -0.8 -2.5 BamA/TamA family outer membrane protein compare
ABI39_RS00745 -0.8 -0.9 tRNA-Met compare
ABI39_RS22820 -0.8 -0.7 hypothetical protein compare
ABI39_RS15510 -0.8 -2.2 cobalt-precorrin-5B (C(1))-methyltransferase compare
ABI39_RS18320 -0.8 -0.8 hypothetical protein compare
ABI39_RS05655 -0.8 -1.9 hypothetical protein compare
ABI39_RS15380 -0.8 -1.7 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
ABI39_RS08810 -0.8 -0.9 DUF3876 domain-containing protein compare
ABI39_RS12385 -0.8 -1.6 transcriptional repressor compare
ABI39_RS07820 -0.8 -3.0 VanZ family protein compare
ABI39_RS12730 -0.8 -3.0 acyl-ACP thioesterase compare
ABI39_RS04715 -0.8 -2.3 NUDIX domain-containing protein compare
ABI39_RS15920 -0.7 -1.0 type II toxin-antitoxin system HigB family toxin compare
ABI39_RS15490 -0.7 -3.3 precorrin-2 C(20)-methyltransferase compare
ABI39_RS11160 -0.7 -1.3 UpxY family transcription antiterminator compare
ABI39_RS14465 -0.7 -2.5 hypothetical protein compare
ABI39_RS23235 -0.7 -0.9 hypothetical protein compare
ABI39_RS11350 -0.7 -2.1 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
ABI39_RS09195 -0.7 -1.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABI39_RS18420 -0.7 -1.4 helix-turn-helix transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Phocaeicola dorei CL03T12C01 in carbon source experiments

For carbon source Fructose-6-phosphate across organisms