Experiment set1S430 for Phocaeicola dorei CL03T12C01

Compare to:

Mannose-6-Phosphate carbon source

200 most important genes:

  gene name fitness t score description  
ABI39_RS21060 -8.3 -5.8 anthranilate phosphoribosyltransferase compare
ABI39_RS21065 -6.7 -8.0 indole-3-glycerol phosphate synthase TrpC compare
ABI39_RS21075 -6.6 -7.9 tryptophan synthase subunit alpha compare
ABI39_RS11830 -6.4 -4.4 ATP phosphoribosyltransferase compare
ABI39_RS11840 -6.4 -4.4 histidinol-phosphate transaminase compare
ABI39_RS04685 -6.1 -7.2 acetylglutamate kinase compare
ABI39_RS07790 -6.1 -9.2 M20 family metallo-hydrolase compare
ABI39_RS04695 -6.0 -7.1 shikimate kinase compare
ABI39_RS02980 -6.0 -8.0 N-acetyltransferase compare
ABI39_RS07835 -5.9 -8.6 alkaline phosphatase compare
ABI39_RS10260 -5.9 -11.8 adenylosuccinate synthase compare
ABI39_RS02960 -5.8 -13.6 pyrroline-5-carboxylate reductase compare
ABI39_RS16910 -5.7 -10.6 3-phosphoglycerate dehydrogenase compare
ABI39_RS02970 -5.7 -9.8 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABI39_RS19930 -5.4 -6.3 imidazole glycerol phosphate synthase subunit HisF compare
ABI39_RS16905 -5.3 -13.3 3-phosphoserine/phosphohydroxythreonine transaminase compare
ABI39_RS02975 -5.2 -11.0 argininosuccinate synthase compare
ABI39_RS02880 -5.2 -11.9 glutamate 5-kinase compare
ABI39_RS12665 -5.2 -7.1 shikimate dehydrogenase compare
ABI39_RS02870 -5.0 -7.7 acetylornithine carbamoyltransferase compare
ABI39_RS10495 -4.9 -9.4 prephenate dehydrogenase compare
ABI39_RS02315 -4.9 -8.8 IMP dehydrogenase compare
ABI39_RS06675 -4.9 -8.7 2-oxoacid:ferredoxin oxidoreductase subunit beta compare
ABI39_RS11835 -4.9 -7.3 histidinol dehydrogenase compare
ABI39_RS02875 -4.9 -9.8 glutamate-5-semialdehyde dehydrogenase compare
ABI39_RS10435 -4.8 -12.0 cofactor-independent phosphoglycerate mutase compare
ABI39_RS06670 -4.8 -13.7 2-oxoacid:acceptor oxidoreductase subunit alpha compare
ABI39_RS07005 -4.7 -5.6 type II 3-dehydroquinate dehydratase compare
ABI39_RS02785 -4.7 -19.2 hypothetical protein compare
ABI39_RS10205 -4.7 -6.2 3-isopropylmalate dehydratase small subunit compare
ABI39_RS00770 -4.7 -11.9 pyridoxal phosphate-dependent aminotransferase compare
ABI39_RS00405 -4.6 -15.0 phosphoribosylformylglycinamidine synthase compare
ABI39_RS11845 -4.6 -8.9 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
ABI39_RS10500 -4.6 -6.3 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase type II compare
ABI39_RS10510 -4.6 -11.0 prephenate dehydratase compare
ABI39_RS12715 -4.6 -10.2 dihydroxy-acid dehydratase compare
ABI39_RS12720 -4.5 -13.4 biosynthetic-type acetolactate synthase large subunit compare
ABI39_RS12675 -4.5 -5.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABI39_RS05660 -4.5 -9.0 acetyl-CoA hydrolase/transferase family protein compare
ABI39_RS19925 -4.4 -5.9 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABI39_RS02775 -4.4 -16.8 ATPase compare
ABI39_RS12645 -4.4 -11.7 chorismate synthase compare
ABI39_RS07095 -4.4 -21.1 argininosuccinate lyase compare
ABI39_RS00475 -4.4 -6.9 phosphoribosylformylglycinamidine cyclo-ligase compare
ABI39_RS06055 -4.4 -8.4 phosphoribosylamine--glycine ligase compare
ABI39_RS10195 -4.4 -5.7 2-isopropylmalate synthase compare
ABI39_RS10215 -4.3 -10.0 3-isopropylmalate dehydrogenase compare
ABI39_RS09575 -4.3 -3.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
ABI39_RS19920 -4.3 -7.1 imidazole glycerol phosphate synthase subunit HisH compare
ABI39_RS10505 -4.2 -11.9 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
ABI39_RS10430 -4.2 -16.0 bifunctional aspartate kinase/homoserine dehydrogenase I compare
ABI39_RS10200 -4.1 -14.0 3-isopropylmalate dehydratase large subunit compare
ABI39_RS19935 -4.0 -7.3 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
ABI39_RS19385 -4.0 -3.9 hypothetical protein compare
ABI39_RS01650 -4.0 -8.1 methylmalonyl-CoA mutase small subunit compare
ABI39_RS04245 -3.9 -2.6 5-(carboxyamino)imidazole ribonucleotide mutase compare
ABI39_RS21045 -3.8 -5.8 tryptophan synthase subunit beta compare
ABI39_RS14560 -3.8 -4.5 aspartate 1-decarboxylase compare
ABI39_RS12735 -3.7 -7.8 ketol-acid reductoisomerase compare
ABI39_RS18745 -3.7 -5.6 pyruvate:ferredoxin (flavodoxin) oxidoreductase compare
ABI39_RS01655 -3.5 -9.7 methylmalonyl-CoA mutase compare
ABI39_RS10440 -3.5 -11.7 threonine synthase compare
ABI39_RS01300 -3.5 -13.2 NADP-specific glutamate dehydrogenase compare
ABI39_RS10210 -3.4 -7.7 2-isopropylmalate synthase compare
ABI39_RS17175 -3.4 -5.2 tetratricopeptide repeat protein compare
ABI39_RS00205 -3.3 -3.2 phosphoglucosamine mutase compare
ABI39_RS08035 -3.2 -2.2 adenylosuccinate lyase compare
ABI39_RS17140 -3.2 -3.1 AAA family ATPase compare
ABI39_RS06995 -3.0 -7.4 tetratricopeptide repeat protein compare
ABI39_RS10110 -3.0 -10.7 S9 family peptidase compare
ABI39_RS12725 -2.9 -6.0 acetolactate synthase small subunit compare
ABI39_RS17170 -2.9 -2.8 protein BatD compare
ABI39_RS10640 -2.9 -11.9 serine dehydratase subunit alpha family protein compare
ABI39_RS00090 -2.8 -5.3 HAMP domain-containing histidine kinase compare
ABI39_RS02755 -2.7 -2.7 glycosyltransferase compare
ABI39_RS18330 -2.7 -8.3 PD40 domain-containing protein compare
ABI39_RS16695 -2.7 -12.3 carbon-nitrogen hydrolase compare
ABI39_RS12415 -2.7 -5.8 biotin/lipoyl-binding protein compare
ABI39_RS08195 -2.7 -4.4 hypothetical protein compare
ABI39_RS17150 -2.7 -4.0 hypothetical protein compare
ABI39_RS10870 -2.6 -8.7 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD compare
ABI39_RS12420 -2.6 -5.8 OadG family protein compare
ABI39_RS08305 -2.6 -6.2 DUF4831 family protein compare
ABI39_RS12425 -2.6 -9.7 acyl-CoA carboxylase subunit beta compare
ABI39_RS18300 -2.5 -2.4 bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase compare
ABI39_RS07090 -2.5 -2.2 hypothetical protein compare
ABI39_RS17950 -2.5 -2.4 Crp/Fnr family transcriptional regulator compare
ABI39_RS21050 -2.5 -4.1 anthranilate synthase component I family protein compare
ABI39_RS01360 -2.4 -6.7 hypothetical protein compare
ABI39_RS01725 -2.4 -4.2 electron transfer flavoprotein subunit beta/FixA family protein compare
ABI39_RS04795 -2.4 -2.1 M28 family peptidase compare
ABI39_RS17420 -2.4 -6.4 serine hydroxymethyltransferase compare
ABI39_RS19950 -2.4 -3.6 diaminopimelate decarboxylase compare
ABI39_RS05175 -2.3 -7.6 4-hydroxy-tetrahydrodipicolinate reductase compare
ABI39_RS19945 -2.3 -8.8 aspartate kinase compare
ABI39_RS04700 -2.2 -2.2 type I DNA topoisomerase compare
ABI39_RS04690 -2.1 -6.4 biosynthetic arginine decarboxylase compare
ABI39_RS12755 -2.1 -2.4 SurA N-terminal domain-containing protein compare
ABI39_RS01415 -2.1 -2.4 branched-chain amino acid aminotransferase compare
ABI39_RS02780 -2.1 -1.9 phosphatase PAP2 family protein compare
ABI39_RS02470 -2.0 -4.2 ATP-dependent DNA helicase RecG compare
ABI39_RS19985 -1.9 -2.6 pyridoxal phosphate-dependent aminotransferase compare
ABI39_RS01735 -1.9 -6.0 acyl-CoA dehydrogenase family protein compare
ABI39_RS11655 -1.8 -3.1 MFS transporter compare
ABI39_RS18740 -1.8 -5.3 ATP-binding protein compare
ABI39_RS02965 -1.8 -8.8 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme compare
ABI39_RS04280 -1.8 -3.5 DUF4292 domain-containing protein compare
ABI39_RS01730 -1.8 -5.3 electron transfer flavoprotein subunit alpha/FixB family protein compare
ABI39_RS11670 -1.7 -2.3 molecular chaperone DnaJ compare
ABI39_RS04230 -1.7 -3.9 RNA polymerase factor sigma-54 compare
ABI39_RS09195 -1.7 -1.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABI39_RS02500 -1.7 -5.4 pyridoxine 5'-phosphate synthase compare
ABI39_RS17160 -1.7 -2.6 VWA domain-containing protein compare
ABI39_RS13000 -1.7 -4.5 sigma-54-dependent Fis family transcriptional regulator compare
ABI39_RS11940 -1.7 -10.1 saccharopine dehydrogenase family protein compare
ABI39_RS04885 -1.6 -3.2 calcium-translocating P-type ATPase, PMCA-type compare
ABI39_RS10650 -1.6 -10.4 AraC family transcriptional regulator compare
ABI39_RS08555 -1.6 -5.4 Trk system potassium transporter TrkA compare
ABI39_RS09915 -1.6 -2.4 DUF5056 domain-containing protein compare
ABI39_RS17640 -1.6 -3.6 YebC/PmpR family DNA-binding transcriptional regulator compare
ABI39_RS06050 -1.5 -3.0 hypothetical protein compare
ABI39_RS04860 -1.5 -1.6 HigA family addiction module antidote protein compare
ABI39_RS20965 -1.4 -2.7 SPOR domain-containing protein compare
ABI39_RS15410 -1.4 -4.3 DUF4296 domain-containing protein compare
ABI39_RS07010 -1.4 -2.1 pyruvate kinase compare
ABI39_RS04970 -1.4 -4.0 Holliday junction branch migration DNA helicase RuvB compare
ABI39_RS16305 -1.3 -1.2 DUF4141 domain-containing protein compare
ABI39_RS15400 -1.3 -5.6 TraR/DksA C4-type zinc finger protein compare
ABI39_RS20100 -1.3 -8.0 electron transport complex subunit RsxC compare
ABI39_RS11405 -1.3 -6.1 hypothetical protein compare
ABI39_RS22625 -1.3 -2.2 hypothetical protein compare
ABI39_RS07000 -1.3 -2.9 site-specific tyrosine recombinase XerD compare
ABI39_RS12430 -1.3 -1.3 methylmalonyl-CoA epimerase compare
ABI39_RS17245 -1.3 -2.2 tRNA (guanosine(37)-N1)-methyltransferase TrmD compare
ABI39_RS00410 -1.2 -1.9 response regulator compare
ABI39_RS02530 -1.2 -1.8 winged helix-turn-helix domain-containing protein compare
ABI39_RS04930 -1.2 -3.7 helix-turn-helix transcriptional regulator compare
ABI39_RS09845 -1.2 -1.4 (d)CMP kinase compare
ABI39_RS20080 -1.2 -6.7 electron transport complex subunit RsxA compare
ABI39_RS13835 -1.2 -2.2 DUF3037 domain-containing protein compare
ABI39_RS09285 -1.2 -2.4 hypothetical protein compare
ABI39_RS17790 -1.2 -1.6 hypothetical protein compare
ABI39_RS06250 -1.2 -8.5 4-phosphoerythronate dehydrogenase PdxB compare
ABI39_RS20085 -1.2 -4.3 electron transport complex subunit E compare
ABI39_RS20095 -1.2 -7.2 RnfABCDGE type electron transport complex subunit D compare
ABI39_RS15775 -1.2 -1.3 hypothetical protein compare
ABI39_RS12170 -1.1 -1.2 MarR family transcriptional regulator compare
ABI39_RS06010 -1.1 -4.8 polysaccharide deacetylase family protein compare
ABI39_RS16760 -1.1 -2.0 hypothetical protein compare
ABI39_RS21055 -1.1 -3.9 aminodeoxychorismate/anthranilate synthase component II compare
ABI39_RS12810 -1.1 -2.9 hypothetical protein compare
ABI39_RS13170 -1.1 -6.8 Crp/Fnr family transcriptional regulator compare
ABI39_RS17730 -1.1 -6.4 carboxynorspermidine decarboxylase compare
ABI39_RS14255 -1.1 -3.9 DUF452 family protein compare
ABI39_RS17320 -1.1 -2.9 YhcH/YjgK/YiaL family protein compare
ABI39_RS15610 -1.1 -1.3 acetyl-CoA carboxylase biotin carboxylase subunit compare
ABI39_RS09515 -1.1 -3.0 nucleoside deaminase compare
ABI39_RS17130 -1.1 -1.2 HU family DNA-binding protein compare
ABI39_RS14245 -1.1 -7.2 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
ABI39_RS14265 -1.1 -3.9 ATP-dependent dethiobiotin synthetase BioD compare
ABI39_RS13185 -1.1 -1.2 manganese efflux pump compare
ABI39_RS15415 -1.0 -4.0 hypothetical protein compare
ABI39_RS20615 -1.0 -6.0 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
ABI39_RS13180 -1.0 -3.2 FAD:protein FMN transferase compare
ABI39_RS15665 -1.0 -4.2 pyridoxal phosphate-dependent class II aminotransferase compare
ABI39_RS14250 -1.0 -5.2 8-amino-7-oxononanoate synthase compare
ABI39_RS12150 -1.0 -2.9 hotdog fold thioesterase compare
ABI39_RS08135 -1.0 -2.4 YicC family protein compare
ABI39_RS13225 -1.0 -1.6 phosphopyruvate hydratase compare
ABI39_RS21350 -1.0 -1.2 aspartate--ammonia ligase compare
ABI39_RS20175 -1.0 -1.9 translation elongation factor 4 compare
ABI39_RS06070 -1.0 -1.8 hypothetical protein compare
ABI39_RS18320 -1.0 -1.3 hypothetical protein compare
ABI39_RS20105 -0.9 -4.7 Fe-S cluster domain-containing protein compare
ABI39_RS08020 -0.9 -3.3 GntR family transcriptional regulator compare
ABI39_RS20090 -0.9 -4.5 RnfABCDGE type electron transport complex subunit G compare
ABI39_RS14260 -0.9 -4.7 malonyl-ACP O-methyltransferase BioC compare
ABI39_RS02060 -0.9 -4.7 translocation/assembly module TamB domain-containing protein compare
ABI39_RS17315 -0.9 -5.8 alpha amylase C-terminal domain-containing protein compare
ABI39_RS19750 -0.9 -1.4 tRNA-Tyr compare
ABI39_RS01325 -0.9 -5.8 phosphoenolpyruvate synthase compare
ABI39_RS17945 -0.9 -5.6 glutamine synthetase III compare
ABI39_RS09805 -0.9 -2.4 HipA N-terminal domain-containing protein compare
ABI39_RS22950 -0.9 -1.4 hypothetical protein compare
ABI39_RS06060 -0.9 -3.5 S9 family peptidase compare
ABI39_RS14225 -0.9 -5.2 glycosyltransferase compare
ABI39_RS17750 -0.9 -2.5 thiamine phosphate synthase compare
ABI39_RS16315 -0.9 -1.0 conjugative transposon protein TraK compare
ABI39_RS02480 -0.8 -1.8 DJ-1/PfpI family protein compare
ABI39_RS17770 -0.8 -2.2 flavodoxin family protein compare
ABI39_RS04715 -0.8 -3.3 NUDIX domain-containing protein compare
ABI39_RS16700 -0.8 -2.6 agmatine deiminase family protein compare
ABI39_RS20110 -0.8 -2.3 SoxR reducing system RseC family protein compare
ABI39_RS17775 -0.8 -5.2 2-iminoacetate synthase ThiH compare
ABI39_RS04950 -0.8 -1.4 DEAD/DEAH box helicase compare
ABI39_RS04915 -0.8 -4.1 CPBP family intramembrane metalloprotease compare
ABI39_RS15855 -0.8 -2.0 helix-turn-helix transcriptional regulator compare
ABI39_RS02290 -0.8 -2.0 hypothetical protein compare
ABI39_RS19545 -0.8 -2.6 adenine methyltransferase compare
ABI39_RS14235 -0.8 -2.3 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Phocaeicola dorei CL03T12C01 in carbon source experiments

For carbon source Mannose-6-Phosphate across organisms