Experiment set1S424 for Phocaeicola dorei CL03T12C01

Compare to:

D-Maltose monohydrate carbon source

200 most important genes:

  gene name fitness t score description  
ABI39_RS21075 -8.9 -6.1 tryptophan synthase subunit alpha compare
ABI39_RS07005 -8.1 -5.6 type II 3-dehydroquinate dehydratase compare
ABI39_RS00475 -7.9 -6.9 phosphoribosylformylglycinamidine cyclo-ligase compare
ABI39_RS06675 -7.6 -10.4 2-oxoacid:ferredoxin oxidoreductase subunit beta compare
ABI39_RS21065 -7.5 -8.9 indole-3-glycerol phosphate synthase TrpC compare
ABI39_RS00770 -7.5 -14.6 pyridoxal phosphate-dependent aminotransferase compare
ABI39_RS10260 -7.4 -11.4 adenylosuccinate synthase compare
ABI39_RS00405 -7.3 -16.5 phosphoribosylformylglycinamidine synthase compare
ABI39_RS11830 -7.3 -5.0 ATP phosphoribosyltransferase compare
ABI39_RS12720 -7.3 -13.1 biosynthetic-type acetolactate synthase large subunit compare
ABI39_RS02870 -7.1 -8.8 acetylornithine carbamoyltransferase compare
ABI39_RS02975 -7.0 -11.4 argininosuccinate synthase compare
ABI39_RS16905 -6.9 -12.5 3-phosphoserine/phosphohydroxythreonine transaminase compare
ABI39_RS19930 -6.9 -7.0 imidazole glycerol phosphate synthase subunit HisF compare
ABI39_RS12675 -6.9 -6.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABI39_RS05660 -6.8 -11.4 acetyl-CoA hydrolase/transferase family protein compare
ABI39_RS11845 -6.8 -6.6 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
ABI39_RS04695 -6.8 -8.1 shikimate kinase compare
ABI39_RS02880 -6.7 -13.1 glutamate 5-kinase compare
ABI39_RS14560 -6.6 -4.6 aspartate 1-decarboxylase compare
ABI39_RS10510 -6.6 -10.7 prephenate dehydratase compare
ABI39_RS02315 -6.6 -9.0 IMP dehydrogenase compare
ABI39_RS04685 -6.6 -7.8 acetylglutamate kinase compare
ABI39_RS10215 -6.6 -13.5 3-isopropylmalate dehydrogenase compare
ABI39_RS10495 -6.5 -9.3 prephenate dehydrogenase compare
ABI39_RS06055 -6.5 -9.4 phosphoribosylamine--glycine ligase compare
ABI39_RS02875 -6.4 -11.4 glutamate-5-semialdehyde dehydrogenase compare
ABI39_RS02970 -6.4 -11.5 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABI39_RS07095 -6.4 -20.9 argininosuccinate lyase compare
ABI39_RS05175 -6.3 -7.7 4-hydroxy-tetrahydrodipicolinate reductase compare
ABI39_RS12715 -6.1 -13.1 dihydroxy-acid dehydratase compare
ABI39_RS10200 -6.1 -17.4 3-isopropylmalate dehydratase large subunit compare
ABI39_RS10435 -6.1 -10.5 cofactor-independent phosphoglycerate mutase compare
ABI39_RS10440 -6.0 -8.2 threonine synthase compare
ABI39_RS07790 -6.0 -7.7 M20 family metallo-hydrolase compare
ABI39_RS11840 -6.0 -7.2 histidinol-phosphate transaminase compare
ABI39_RS10430 -6.0 -14.2 bifunctional aspartate kinase/homoserine dehydrogenase I compare
ABI39_RS16910 -6.0 -12.1 3-phosphoglycerate dehydrogenase compare
ABI39_RS19985 -5.9 -4.1 pyridoxal phosphate-dependent aminotransferase compare
ABI39_RS10500 -5.8 -7.0 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase type II compare
ABI39_RS02960 -5.8 -13.0 pyrroline-5-carboxylate reductase compare
ABI39_RS10505 -5.8 -12.6 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
ABI39_RS02500 -5.8 -11.8 pyridoxine 5'-phosphate synthase compare
ABI39_RS11835 -5.7 -8.8 histidinol dehydrogenase compare
ABI39_RS04795 -5.7 -3.9 M28 family peptidase compare
ABI39_RS12735 -5.7 -8.2 ketol-acid reductoisomerase compare
ABI39_RS06670 -5.7 -13.2 2-oxoacid:acceptor oxidoreductase subunit alpha compare
ABI39_RS01300 -5.6 -12.7 NADP-specific glutamate dehydrogenase compare
ABI39_RS12645 -5.6 -14.3 chorismate synthase compare
ABI39_RS19920 -5.6 -10.6 imidazole glycerol phosphate synthase subunit HisH compare
ABI39_RS12665 -5.6 -8.5 shikimate dehydrogenase compare
ABI39_RS19925 -5.6 -8.7 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABI39_RS12725 -5.5 -9.3 acetolactate synthase small subunit compare
ABI39_RS02980 -5.5 -10.7 N-acetyltransferase compare
ABI39_RS21045 -5.5 -7.5 tryptophan synthase subunit beta compare
ABI39_RS21060 -5.5 -9.4 anthranilate phosphoribosyltransferase compare
ABI39_RS10205 -5.4 -7.4 3-isopropylmalate dehydratase small subunit compare
ABI39_RS10195 -5.4 -9.1 2-isopropylmalate synthase compare
ABI39_RS09575 -5.3 -3.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
ABI39_RS17315 -5.2 -14.1 alpha amylase C-terminal domain-containing protein compare
ABI39_RS17420 -5.1 -9.6 serine hydroxymethyltransferase compare
ABI39_RS19935 -5.0 -10.4 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
ABI39_RS04505 -4.9 -8.6 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
ABI39_RS06250 -4.8 -12.4 4-phosphoerythronate dehydrogenase PdxB compare
ABI39_RS10210 -4.8 -15.4 2-isopropylmalate synthase compare
ABI39_RS10870 -4.6 -14.2 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD compare
ABI39_RS12955 -4.6 -3.2 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
ABI39_RS00205 -4.6 -3.2 phosphoglucosamine mutase compare
ABI39_RS10640 -4.6 -12.5 serine dehydratase subunit alpha family protein compare
ABI39_RS21050 -4.5 -7.4 anthranilate synthase component I family protein compare
ABI39_RS19945 -4.4 -11.9 aspartate kinase compare
ABI39_RS08035 -4.3 -3.0 adenylosuccinate lyase compare
ABI39_RS02755 -4.3 -2.9 glycosyltransferase compare
ABI39_RS02965 -4.2 -16.7 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme compare
ABI39_RS18745 -4.1 -7.4 pyruvate:ferredoxin (flavodoxin) oxidoreductase compare
ABI39_RS01415 -4.1 -2.8 branched-chain amino acid aminotransferase compare
ABI39_RS04425 -3.9 -18.7 hypothetical protein compare
ABI39_RS17140 -3.9 -3.8 AAA family ATPase compare
ABI39_RS04245 -3.8 -3.2 5-(carboxyamino)imidazole ribonucleotide mutase compare
ABI39_RS04230 -3.8 -6.8 RNA polymerase factor sigma-54 compare
ABI39_RS01360 -3.7 -9.9 hypothetical protein compare
ABI39_RS17170 -3.7 -3.6 protein BatD compare
ABI39_RS04885 -3.6 -5.0 calcium-translocating P-type ATPase, PMCA-type compare
ABI39_RS04690 -3.6 -8.7 biosynthetic arginine decarboxylase compare
ABI39_RS19950 -3.5 -4.1 diaminopimelate decarboxylase compare
ABI39_RS11405 -3.5 -9.9 hypothetical protein compare
ABI39_RS17640 -3.4 -5.2 YebC/PmpR family DNA-binding transcriptional regulator compare
ABI39_RS11670 -3.3 -3.3 molecular chaperone DnaJ compare
ABI39_RS17175 -3.3 -6.9 tetratricopeptide repeat protein compare
ABI39_RS17950 -3.2 -3.1 Crp/Fnr family transcriptional regulator compare
ABI39_RS12755 -3.0 -3.6 SurA N-terminal domain-containing protein compare
ABI39_RS02470 -3.0 -6.1 ATP-dependent DNA helicase RecG compare
ABI39_RS14225 -3.0 -10.9 glycosyltransferase compare
ABI39_RS10110 -2.9 -11.6 S9 family peptidase compare
ABI39_RS13000 -2.9 -6.1 sigma-54-dependent Fis family transcriptional regulator compare
ABI39_RS15415 -2.9 -7.4 hypothetical protein compare
ABI39_RS17320 -2.9 -2.3 YhcH/YjgK/YiaL family protein compare
ABI39_RS08195 -2.9 -6.2 hypothetical protein compare
ABI39_RS07090 -2.8 -1.7 hypothetical protein compare
ABI39_RS17945 -2.7 -13.4 glutamine synthetase III compare
ABI39_RS18910 -2.7 -2.5 preprotein translocase subunit YajC compare
ABI39_RS18300 -2.7 -4.4 bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase compare
ABI39_RS21350 -2.7 -1.8 aspartate--ammonia ligase compare
ABI39_RS21055 -2.7 -5.9 aminodeoxychorismate/anthranilate synthase component II compare
ABI39_RS04435 -2.6 -18.9 glycoside hydrolase family 97 protein compare
ABI39_RS17150 -2.6 -4.7 hypothetical protein compare
ABI39_RS17160 -2.6 -3.8 VWA domain-containing protein compare
ABI39_RS00410 -2.6 -3.0 response regulator compare
ABI39_RS09230 -2.4 -2.6 hypothetical protein compare
ABI39_RS06995 -2.4 -9.3 tetratricopeptide repeat protein compare
ABI39_RS16875 -2.3 -4.1 NADH:ubiquinone reductase (Na(+)-transporting) subunit B compare
ABI39_RS04860 -2.3 -2.6 HigA family addiction module antidote protein compare
ABI39_RS04700 -2.3 -3.6 type I DNA topoisomerase compare
ABI39_RS14230 -2.3 -12.5 alpha-amylase compare
ABI39_RS12770 -2.2 -3.1 hypothetical protein compare
ABI39_RS19385 -2.1 -4.3 hypothetical protein compare
ABI39_RS18330 -2.1 -9.1 PD40 domain-containing protein compare
ABI39_RS06115 -2.1 -7.8 phosphatase PAP2 family protein compare
ABI39_RS09195 -2.1 -2.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABI39_RS12565 -2.1 -8.1 hypothetical protein compare
ABI39_RS09855 -2.0 -4.3 polyprenyl synthetase family protein compare
ABI39_RS15410 -2.0 -5.2 DUF4296 domain-containing protein compare
ABI39_RS11940 -2.0 -11.4 saccharopine dehydrogenase family protein compare
ABI39_RS08305 -2.0 -6.6 DUF4831 family protein compare
ABI39_RS20615 -1.9 -9.0 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
ABI39_RS09850 -1.9 -5.3 energy transducer TonB compare
ABI39_RS12560 -1.8 -9.9 GGGtGRT protein compare
ABI39_RS16880 -1.8 -4.2 Na(+)-translocating NADH-quinone reductase subunit C compare
ABI39_RS04400 -1.8 -11.9 4-alpha-glucanotransferase compare
ABI39_RS17775 -1.8 -8.6 2-iminoacetate synthase ThiH compare
ABI39_RS06380 -1.8 -5.2 GH3 auxin-responsive promoter family protein compare
ABI39_RS17755 -1.8 -2.0 thiazole synthase compare
ABI39_RS02985 -1.8 -4.9 arginine repressor compare
ABI39_RS04405 -1.7 -5.2 SLC45 family MFS transporter conserved
ABI39_RS09515 -1.7 -4.7 nucleoside deaminase compare
ABI39_RS05450 -1.7 -3.4 redox-regulated ATPase YchF compare
ABI39_RS10650 -1.7 -10.8 AraC family transcriptional regulator compare
ABI39_RS12415 -1.7 -3.7 biotin/lipoyl-binding protein compare
ABI39_RS19915 -1.6 -6.4 formyltetrahydrofolate deformylase compare
ABI39_RS17750 -1.6 -3.2 thiamine phosphate synthase compare
ABI39_RS16305 -1.6 -1.5 DUF4141 domain-containing protein compare
ABI39_RS17780 -1.6 -6.6 HesA/MoeB/ThiF family protein compare
ABI39_RS04970 -1.6 -4.7 Holliday junction branch migration DNA helicase RuvB compare
ABI39_RS12945 -1.6 -2.6 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN compare
ABI39_RS14240 -1.6 -4.4 biotin synthase BioB compare
ABI39_RS17795 -1.6 -7.5 thiamine phosphate synthase compare
ABI39_RS04930 -1.6 -3.0 helix-turn-helix transcriptional regulator compare
ABI39_RS17765 -1.5 -2.9 hypothetical protein compare
ABI39_RS14260 -1.5 -9.8 malonyl-ACP O-methyltransferase BioC compare
ABI39_RS14245 -1.5 -10.2 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
ABI39_RS01325 -1.5 -8.2 phosphoenolpyruvate synthase compare
ABI39_RS09685 -1.5 -1.6 hypothetical protein compare
ABI39_RS04280 -1.5 -5.3 DUF4292 domain-containing protein compare
ABI39_RS17770 -1.5 -2.7 flavodoxin family protein compare
ABI39_RS14265 -1.4 -5.6 ATP-dependent dethiobiotin synthetase BioD compare
ABI39_RS14250 -1.4 -6.7 8-amino-7-oxononanoate synthase compare
ABI39_RS16885 -1.4 -2.7 NADH:ubiquinone reductase (Na(+)-transporting) subunit D compare
ABI39_RS00520 -1.4 -5.9 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
ABI39_RS16870 -1.4 -2.6 Na(+)-translocating NADH-quinone reductase subunit A compare
ABI39_RS06050 -1.4 -2.9 hypothetical protein compare
ABI39_RS12670 -1.4 -4.8 bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE compare
ABI39_RS06010 -1.3 -6.7 polysaccharide deacetylase family protein compare
ABI39_RS14030 -1.3 -4.1 MFS transporter compare
ABI39_RS06060 -1.3 -3.8 S9 family peptidase compare
ABI39_RS15360 -1.3 -3.4 Na+/H+ antiporter NhaC family protein compare
ABI39_RS17730 -1.3 -7.0 carboxynorspermidine decarboxylase compare
ABI39_RS17745 -1.3 -2.4 sulfur carrier protein ThiS compare
ABI39_RS07010 -1.2 -2.1 pyruvate kinase compare
ABI39_RS04730 -1.2 -1.9 Lrp/AsnC ligand binding domain-containing protein compare
ABI39_RS16040 -1.2 -1.3 hypothetical protein compare
ABI39_RS12425 -1.2 -7.3 acyl-CoA carboxylase subunit beta compare
ABI39_RS04430 -1.2 -4.2 glycoside hydrolase family 13 protein compare
ABI39_RS13180 -1.2 -3.6 FAD:protein FMN transferase compare
ABI39_RS20175 -1.2 -2.6 translation elongation factor 4 compare
ABI39_RS01650 -1.2 -4.6 methylmalonyl-CoA mutase small subunit compare
ABI39_RS08850 -1.2 -3.4 toprim domain-containing protein compare
ABI39_RS17205 -1.1 -2.3 ATP-dependent Clp protease ATP-binding subunit compare
ABI39_RS16895 -1.1 -2.6 NADH:ubiquinone reductase (Na(+)-transporting) subunit F compare
ABI39_RS14235 -1.1 -3.4 hypothetical protein compare
ABI39_RS17760 -1.1 -4.8 phosphomethylpyrimidine synthase ThiC compare
ABI39_RS12420 -1.1 -4.2 OadG family protein compare
ABI39_RS09845 -1.1 -1.6 (d)CMP kinase compare
ABI39_RS09285 -1.1 -2.4 hypothetical protein compare
ABI39_RS19775 -1.1 -1.0 tRNA-Met compare
ABI39_RS17850 -1.1 -4.2 alpha-glucan family phosphorylase compare
ABI39_RS06920 -1.1 -4.8 glycosyltransferase compare
ABI39_RS18740 -1.0 -3.7 ATP-binding protein compare
ABI39_RS11655 -1.0 -2.6 MFS transporter compare
ABI39_RS03880 -1.0 -7.7 PDZ domain-containing protein compare
ABI39_RS09835 -1.0 -6.1 6-phosphofructokinase compare
ABI39_RS01655 -1.0 -5.6 methylmalonyl-CoA mutase compare
ABI39_RS22360 -1.0 -2.0 potassium-transporting ATPase subunit F compare
ABI39_RS12970 -1.0 -4.8 CDP-alcohol phosphatidyltransferase family protein compare
ABI39_RS13150 -1.0 -5.4 S41 family peptidase compare
ABI39_RS04285 -1.0 -5.3 tetratricopeptide repeat protein compare
ABI39_RS15010 -0.9 -1.9 F0F1 ATP synthase subunit gamma compare
ABI39_RS15430 -0.9 -1.2 hypothetical protein compare
ABI39_RS00745 -0.9 -1.7 tRNA-Met compare
ABI39_RS16520 -0.9 -5.2 endopeptidase La compare
ABI39_RS12980 -0.9 -2.0 HAD family hydrolase compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source D-Maltose monohydrate in Phocaeicola dorei CL03T12C01

For carbon source D-Maltose monohydrate across organisms