Experiment set1S424 for Phocaeicola dorei CL03T12C01
D-Maltose monohydrate carbon source
Group: carbon sourceMedia: Varel_Bryant_medium + D-Maltose monohydrate (20 mM)
Culturing: Bdorei_CL03T12C01_ML9, 96 deep-well microplate; 1.2 mL volume, Anaerobic, at 34 (C), shaken=0 rpm
By: Surya on 10/1/23
Media components: 15 uM Hemin, 134 uM L-Methionine, 15 uM Iron (II) sulfate heptahydrate, 8.25 mM L-Cysteine, 23.8 mM Sodium bicarbonate, Mineral 3B solution (6.6 mM Potassium phosphate monobasic, 15.4 mM Sodium Chloride, 98 uM Magnesium chloride hexahydrate, 176.5 uM Calcium chloride dihydrate, 4.2 uM Cobalt chloride hexahydrate, 50.5 uM Manganese (II) chloride tetrahydrate, 9.3 mM Ammonium chloride, 1.75 mM Sodium sulfate)
Specific Phenotypes
For 2 genes in this experiment
For carbon source D-Maltose monohydrate in Phocaeicola dorei CL03T12C01
For carbon source D-Maltose monohydrate across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Glycogen metabolism | 1 |
| Maltose and Maltodextrin Utilization | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| starch degradation V | 4 | 3 | 1 |
| glycogen degradation I | 8 | 7 | 1 |
| sucrose biosynthesis II | 8 | 5 | 1 |
| starch degradation II | 9 | 1 | 1 |