Experiment set1S423 for Erwinia tracheiphila SCR3

Compare to:

Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)

200 most important genes:

  gene name fitness t score description  
LU632_RS23980 tatC -8.0 -9.2 Sec-independent protein translocase subunit TatC compare
LU632_RS15245 purE -7.8 -2.5 5-(carboxyamino)imidazole ribonucleotide mutase compare
LU632_RS08880 -7.6 -2.8 ABC transporter permease compare
LU632_RS09955 pyrD -6.6 -4.6 quinone-dependent dihydroorotate dehydrogenase compare
LU632_RS08785 -6.6 -4.5 glycosyltransferase family 2 protein compare
LU632_RS21755 -6.4 -4.4 adenylosuccinate synthase compare
LU632_RS08790 -6.4 -5.8 EpsG family protein compare
LU632_RS08815 -6.2 -3.2 colanic acid biosynthesis glycosyltransferase WcaL compare
LU632_RS07865 purF -5.9 -12.7 amidophosphoribosyltransferase compare
LU632_RS16115 sdhC -5.9 -5.5 succinate dehydrogenase cytochrome b556 subunit compare
LU632_RS08930 hisH -5.9 -4.1 imidazole glycerol phosphate synthase subunit HisH compare
LU632_RS09475 mntR -5.9 -3.4 manganese-binding transcriptional regulator MntR compare
LU632_RS20950 pyrB -5.8 -4.0 aspartate carbamoyltransferase compare
LU632_RS21225 mlaB -5.7 -3.3 lipid asymmetry maintenance protein MlaB compare
LU632_RS12500 pyrF -5.7 -3.9 orotidine-5'-phosphate decarboxylase compare
LU632_RS02750 carB -5.7 -3.9 carbamoyl-phosphate synthase large subunit compare
LU632_RS10340 pyrC -5.6 -3.8 dihydroorotase compare
LU632_RS16090 odhB -5.5 -2.3 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase compare
LU632_RS08820 -5.5 -3.8 lipopolysaccharide biosynthesis protein compare
LU632_RS06635 zipA -5.5 -2.2 cell division protein ZipA compare
LU632_RS08775 -5.5 -3.5 protein tyrosine phosphatase compare
LU632_RS06615 ptsI -5.4 -11.6 phosphoenolpyruvate-protein phosphotransferase PtsI compare
LU632_RS16110 sdhD -5.4 -8.0 succinate dehydrogenase membrane anchor subunit compare
LU632_RS17975 purL -5.4 -11.5 phosphoribosylformylglycinamidine synthase compare
LU632_RS08935 hisB -5.3 -5.2 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
LU632_RS07775 aroC -5.2 -4.1 chorismate synthase compare
LU632_RS08920 hisF -5.2 -5.0 imidazole glycerol phosphate synthase subunit HisF compare
LU632_RS14010 ldcA -5.1 -3.4 muramoyltetrapeptide carboxypeptidase compare
LU632_RS15425 rpoE -5.1 -9.8 RNA polymerase sigma factor RpoE compare
LU632_RS08335 -5.1 -1.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
LU632_RS15250 purK -5.0 -3.5 5-(carboxyamino)imidazole ribonucleotide synthase compare
LU632_RS21230 mlaC -5.0 -7.7 phospholipid-binding protein MlaC compare
LU632_RS08915 hisIE -5.0 -4.5 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
LU632_RS08925 hisA -5.0 -2.1 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
LU632_RS16105 sdhA -5.0 -10.7 succinate dehydrogenase flavoprotein subunit compare
LU632_RS08800 -5.0 -2.0 glycosyltransferase compare
LU632_RS25495 -5.0 -1.3 type II toxin-antitoxin system MqsA family antitoxin compare
LU632_RS21240 mlaE -4.9 -4.6 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
LU632_RS19585 sthA -4.9 -12.8 Si-specific NAD(P)(+) transhydrogenase compare
LU632_RS21235 mlaD -4.9 -6.8 outer membrane lipid asymmetry maintenance protein MlaD compare
LU632_RS07965 -4.8 -5.5 NADH-quinone oxidoreductase subunit A compare
LU632_RS19665 ftsN -4.7 -4.2 cell division protein FtsN compare
LU632_RS22810 -4.7 -12.1 aspartate aminotransferase family protein compare
LU632_RS16100 -4.7 -4.3 succinate dehydrogenase iron-sulfur subunit compare
LU632_RS22140 glnL -4.6 -10.4 nitrogen regulation protein NR(II) compare
LU632_RS10270 -4.6 -2.1 glucan biosynthesis protein G compare
LU632_RS21245 mlaF -4.6 -9.2 phospholipid ABC transporter ATP-binding protein MlaF compare
LU632_RS21955 -4.6 -1.5 glycosyltransferase family 4 protein compare
LU632_RS08780 wzc -4.6 -14.9 tyrosine-protein kinase Wzc compare
LU632_RS16095 sucA -4.6 -3.2 2-oxoglutarate dehydrogenase E1 component compare
LU632_RS08950 hisG -4.6 -11.2 ATP phosphoribosyltransferase compare
LU632_RS02755 carA -4.5 -9.9 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit compare
LU632_RS14040 -4.5 -1.2 transposase compare
LU632_RS07980 nuoE -4.5 -1.2 NADH-quinone oxidoreductase subunit NuoE compare
LU632_RS22015 pyrE -4.5 -3.1 orotate phosphoribosyltransferase compare
LU632_RS12910 -4.5 -2.6 NAD-dependent epimerase compare
LU632_RS21875 gpsA -4.4 -12.6 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
LU632_RS08945 hisD -4.4 -6.9 histidinol dehydrogenase compare
LU632_RS08275 purM -4.4 -8.1 phosphoribosylformylglycinamidine cyclo-ligase compare
LU632_RS08000 nuoI -4.4 -5.5 NADH-quinone oxidoreductase subunit NuoI compare
LU632_RS05960 sdhE -4.3 -4.5 FAD assembly factor SdhE compare
LU632_RS08805 -4.3 -16.8 phage tailspike protein compare
LU632_RS01020 purH -4.2 -2.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
LU632_RS07985 nuoF -4.2 -9.7 NADH-quinone oxidoreductase subunit NuoF compare
LU632_RS02100 -4.2 -16.2 hemolysin family protein compare
LU632_RS08940 hisC -4.2 -12.4 histidinol-phosphate transaminase compare
LU632_RS08025 nuoN -4.2 -8.4 NADH-quinone oxidoreductase subunit NuoN compare
LU632_RS08020 nuoM -4.1 -9.0 NADH-quinone oxidoreductase subunit M compare
LU632_RS01015 purD -4.0 -6.3 phosphoribosylamine--glycine ligase compare
LU632_RS19620 argE -4.0 -7.1 acetylornithine deacetylase compare
LU632_RS07995 nuoH -4.0 -4.2 NADH-quinone oxidoreductase subunit NuoH compare
LU632_RS07300 mlaA -4.0 -12.7 phospholipid-binding lipoprotein MlaA compare
LU632_RS07970 -4.0 -11.9 NADH-quinone oxidoreductase subunit B compare
LU632_RS07975 nuoC -4.0 -15.7 NADH-quinone oxidoreductase subunit C/D compare
LU632_RS08770 -3.9 -10.2 polysaccharide export protein compare
LU632_RS24270 gppA -3.9 -2.0 guanosine-5'-triphosphate,3'-diphosphate diphosphatase compare
LU632_RS21085 secG -3.8 -2.6 preprotein translocase subunit SecG compare
LU632_RS02870 leuC -3.8 -11.8 3-isopropylmalate dehydratase large subunit compare
LU632_RS16415 tatE -3.8 -0.7 twin-arginine translocase subunit TatE compare
LU632_RS02865 leuD -3.8 -6.1 3-isopropylmalate dehydratase small subunit compare
LU632_RS02875 leuB -3.8 -10.9 3-isopropylmalate dehydrogenase compare
LU632_RS12925 rssB -3.8 -1.6 two-component system response regulator RssB compare
LU632_RS02545 serB -3.7 -2.5 phosphoserine phosphatase compare
LU632_RS19610 argB -3.7 -3.9 acetylglutamate kinase compare
LU632_RS09745 -3.7 -1.3 DNA translocase FtsK 4TM domain-containing protein compare
LU632_RS25725 -3.6 -1.8 ParA family protein compare
LU632_RS08010 nuoK -3.6 -4.4 NADH-quinone oxidoreductase subunit NuoK compare
LU632_RS02070 hflC -3.6 -2.6 protease modulator HflC compare
LU632_RS24155 -3.6 -1.3 class I adenylate cyclase compare
LU632_RS09915 ompC -3.6 -6.4 porin OmpC compare
LU632_RS17615 -3.6 -3.5 YejL family protein compare
LU632_RS22135 glnG -3.5 -7.2 nitrogen regulation protein NR(I) compare
LU632_RS19615 argC -3.5 -7.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
LU632_RS08015 nuoL -3.5 -12.6 NADH-quinone oxidoreductase subunit L compare
LU632_RS04250 yiaK -3.5 -4.3 3-dehydro-L-gulonate 2-dehydrogenase compare
LU632_RS02615 thrB -3.5 -4.5 homoserine kinase compare
LU632_RS24405 -3.4 -13.4 branched-chain amino acid transaminase compare
LU632_RS06610 crr -3.4 -3.0 PTS glucose transporter subunit IIA compare
LU632_RS08885 -3.4 -5.0 ABC transporter ATP-binding protein compare
LU632_RS05855 serA -3.4 -9.6 phosphoglycerate dehydrogenase compare
LU632_RS12850 cls -3.4 -2.9 cardiolipin synthase compare
LU632_RS08005 nuoJ -3.3 -7.6 NADH-quinone oxidoreductase subunit J compare
LU632_RS19605 -3.3 -6.0 argininosuccinate synthase compare
LU632_RS06410 -3.3 -1.7 phosphoadenylyl-sulfate reductase compare
LU632_RS02065 hflK -3.3 -2.4 FtsH protease activity modulator HflK compare
LU632_RS21360 degS -3.3 -12.8 outer membrane-stress sensor serine endopeptidase DegS compare
LU632_RS09795 aroA -3.3 -12.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
LU632_RS10275 mdoH -3.3 -5.0 glucans biosynthesis glucosyltransferase MdoH compare
LU632_RS20695 bacA -3.2 -4.5 undecaprenyl-diphosphate phosphatase compare
LU632_RS21365 mdh -3.2 -6.8 malate dehydrogenase compare
LU632_RS07990 nuoG -3.2 -8.1 NADH-quinone oxidoreductase subunit NuoG compare
LU632_RS19450 pitA -3.2 -1.9 inorganic phosphate transporter PitA compare
LU632_RS22940 ompR -3.1 -5.2 two-component system response regulator OmpR compare
LU632_RS03310 -3.1 -14.5 sucrose-6-phosphate hydrolase compare
LU632_RS17820 ndk -3.1 -2.1 nucleoside-diphosphate kinase compare
LU632_RS22935 envZ -3.1 -9.7 two-component system sensor histidine kinase EnvZ compare
LU632_RS20900 argF -3.0 -5.9 ornithine carbamoyltransferase compare
LU632_RS06210 argA -3.0 -9.6 amino-acid N-acetyltransferase compare
LU632_RS19930 rseP -3.0 -5.5 sigma E protease regulator RseP compare
LU632_RS02880 leuA -3.0 -11.8 2-isopropylmalate synthase compare
LU632_RS18995 proC -3.0 -3.4 pyrroline-5-carboxylate reductase compare
LU632_RS01090 rnhA -3.0 -1.4 ribonuclease HI compare
LU632_RS02140 -3.0 -2.5 ribosome-associated protein compare
LU632_RS24840 kup -3.0 -10.3 low affinity potassium transporter Kup compare
LU632_RS01385 -2.9 -0.8 hypothetical protein compare
LU632_RS19600 argH -2.9 -9.7 argininosuccinate lyase compare
LU632_RS15445 tyrA -2.9 -12.0 bifunctional chorismate mutase/prephenate dehydrogenase compare
LU632_RS10745 sirB1 -2.9 -1.0 invasion regulator SirB1 compare
LU632_RS04390 -2.9 -1.0 N-acetylmuramoyl-L-alanine amidase compare
LU632_RS18420 -2.9 -0.7 LysE family translocator compare
LU632_RS17645 -2.8 -1.0 hypothetical protein compare
LU632_RS17420 -2.8 -1.0 phosphatidylinositol-specific phospholipase C domain-containing protein compare
LU632_RS05510 speA -2.8 -1.1 biosynthetic arginine decarboxylase compare
LU632_RS20120 -2.7 -2.0 ABC transporter permease compare
LU632_RS19770 -2.7 -9.2 amino acid ABC transporter substrate-binding protein compare
LU632_RS26015 -2.7 -5.3 hypothetical protein compare
LU632_RS14745 -2.7 -1.0 IS5 family transposase compare
LU632_RS18500 tgt -2.6 -3.9 tRNA guanosine(34) transglycosylase Tgt compare
LU632_RS23985 tatB -2.6 -2.6 Sec-independent protein translocase protein TatB compare
LU632_RS24215 -2.6 -7.2 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
LU632_RS24250 wecA -2.6 -14.1 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
LU632_RS24205 rffM -2.6 -7.6 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
LU632_RS09705 clpA -2.5 -9.7 ATP-dependent Clp protease ATP-binding subunit ClpA compare
LU632_RS16480 -2.5 -5.5 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
LU632_RS01085 -2.5 -2.9 class I SAM-dependent methyltransferase compare
LU632_RS06040 lysA -2.5 -7.5 diaminopimelate decarboxylase compare
LU632_RS24450 hdfR -2.5 -5.6 HTH-type transcriptional regulator HdfR compare
LU632_RS15095 -2.5 -1.4 Cro/CI family transcriptional regulator compare
LU632_RS09985 pqiC -2.5 -4.5 membrane integrity-associated transporter subunit PqiC compare
LU632_RS00895 tuf -2.5 -5.5 elongation factor Tu compare
LU632_RS24885 pstC -2.4 -2.8 phosphate ABC transporter permease PstC compare
LU632_RS21880 secB -2.4 -3.3 protein-export chaperone SecB compare
LU632_RS12940 purU -2.4 -11.1 formyltetrahydrofolate deformylase compare
LU632_RS26010 -2.4 -7.6 head-tail adaptor compare
LU632_RS09245 -2.4 -5.8 L,D-transpeptidase family protein compare
LU632_RS24400 ilvD -2.4 -10.1 dihydroxy-acid dehydratase compare
LU632_RS02910 rsmH -2.3 -7.5 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
LU632_RS19275 ftsE -2.3 -4.5 cell division ATP-binding protein FtsE compare
LU632_RS21940 -2.3 -1.7 glycosyltransferase compare
LU632_RS13165 -2.3 -1.4 hypothetical protein compare
LU632_RS05020 -2.3 -2.2 TIGR03746 family integrating conjugative element protein compare
LU632_RS07685 -2.3 -0.7 helix-turn-helix domain-containing protein compare
LU632_RS19775 -2.3 -8.1 amino acid ABC transporter permease compare
LU632_RS20960 ridA -2.3 -2.9 2-iminobutanoate/2-iminopropanoate deaminase compare
LU632_RS16760 -2.3 -1.7 IS1-like element transposase compare
LU632_RS14835 plsX -2.2 -3.9 phosphate acyltransferase PlsX compare
LU632_RS09730 trxB -2.2 -3.1 thioredoxin-disulfide reductase compare
LU632_RS19785 -2.1 -7.5 amino acid ABC transporter ATP-binding protein compare
LU632_RS02590 gpmB -2.1 -3.3 2,3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB compare
LU632_RS22865 aroB -2.1 -2.1 3-dehydroquinate synthase compare
LU632_RS19780 -2.1 -7.6 amino acid ABC transporter permease compare
LU632_RS19270 ftsX -2.0 -9.2 permease-like cell division protein FtsX compare
LU632_RS17785 bamB -2.0 -4.7 outer membrane protein assembly factor BamB compare
LU632_RS01265 -2.0 -1.9 hypothetical protein compare
LU632_RS16565 -2.0 -1.2 hypothetical protein compare
LU632_RS19495 gorA -2.0 -2.0 glutathione-disulfide reductase compare
LU632_RS05390 -2.0 -10.2 ornithine decarboxylase compare
LU632_RS13455 cmoA -2.0 -3.8 carboxy-S-adenosyl-L-methionine synthase CmoA compare
LU632_RS07860 cvpA -2.0 -4.9 colicin V production protein compare
LU632_RS24880 pstS -2.0 -4.1 phosphate ABC transporter substrate-binding protein PstS compare
LU632_RS05275 -1.9 -1.3 ATP-binding protein compare
LU632_RS19815 gmhB -1.9 -1.2 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase compare
LU632_RS22710 -1.9 -4.5 transcriptional regulator compare
LU632_RS07005 -1.9 -1.4 helix-turn-helix transcriptional regulator compare
LU632_RS15415 rseB -1.9 -5.3 sigma-E factor regulatory protein RseB compare
LU632_RS08190 apbE -1.9 -1.8 FAD:protein FMN transferase ApbE compare
LU632_RS23695 -1.9 -1.0 MmcQ/YjbR family DNA-binding protein compare
LU632_RS23875 dsbA -1.9 -0.9 thiol:disulfide interchange protein DsbA compare
LU632_RS20545 metC -1.9 -6.7 cystathionine beta-lyase compare
LU632_RS14860 rne -1.9 -0.5 ribonuclease E compare
LU632_RS21740 -1.8 -0.9 hypothetical protein compare
LU632_RS07955 -1.8 -8.4 pyridoxal phosphate-dependent aminotransferase compare
LU632_RS22360 -1.8 -2.6 exopolysaccharide production protein YjbE compare
LU632_RS22410 metA -1.8 -6.9 homoserine O-succinyltransferase compare
LU632_RS19750 -1.8 -1.8 PhzF family phenazine biosynthesis protein compare
LU632_RS14735 -1.8 -5.3 glycine zipper 2TM domain-containing protein compare
LU632_RS00695 -1.8 -0.6 fimbria/pilus periplasmic chaperone compare
LU632_RS22150 typA -1.8 -1.4 ribosome-dependent GTPase TypA compare
LU632_RS14710 -1.8 -1.0 antitermination protein compare
LU632_RS21700 fklB -1.8 -1.0 peptidylprolyl isomerase compare


Specific Phenotypes

For 1 genes in this experiment