Experiment set1S423 for Phocaeicola dorei CL03T12C01

Compare to:

D-Maltose monohydrate carbon source

200 most important genes:

  gene name fitness t score description  
ABI39_RS07005 -8.2 -5.6 type II 3-dehydroquinate dehydratase compare
ABI39_RS00475 -8.0 -7.3 phosphoribosylformylglycinamidine cyclo-ligase compare
ABI39_RS02980 -7.9 -9.5 N-acetyltransferase compare
ABI39_RS04685 -7.7 -7.2 acetylglutamate kinase compare
ABI39_RS19925 -7.7 -7.5 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABI39_RS12715 -7.4 -13.3 dihydroxy-acid dehydratase compare
ABI39_RS02970 -7.3 -11.4 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABI39_RS19935 -7.3 -10.1 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
ABI39_RS10260 -7.3 -12.2 adenylosuccinate synthase compare
ABI39_RS00405 -7.3 -17.3 phosphoribosylformylglycinamidine synthase compare
ABI39_RS10510 -7.2 -11.0 prephenate dehydratase compare
ABI39_RS06055 -7.2 -8.5 phosphoribosylamine--glycine ligase compare
ABI39_RS10205 -7.0 -5.9 3-isopropylmalate dehydratase small subunit compare
ABI39_RS05660 -6.9 -10.5 acetyl-CoA hydrolase/transferase family protein compare
ABI39_RS02315 -6.9 -8.2 IMP dehydrogenase compare
ABI39_RS16905 -6.8 -13.1 3-phosphoserine/phosphohydroxythreonine transaminase compare
ABI39_RS21050 -6.8 -9.0 anthranilate synthase component I family protein compare
ABI39_RS10200 -6.8 -17.0 3-isopropylmalate dehydratase large subunit compare
ABI39_RS00770 -6.7 -13.9 pyridoxal phosphate-dependent aminotransferase compare
ABI39_RS07095 -6.7 -19.5 argininosuccinate lyase compare
ABI39_RS11835 -6.6 -7.9 histidinol dehydrogenase compare
ABI39_RS02975 -6.6 -9.9 argininosuccinate synthase compare
ABI39_RS10215 -6.6 -10.8 3-isopropylmalate dehydrogenase compare
ABI39_RS21045 -6.6 -6.4 tryptophan synthase subunit beta compare
ABI39_RS21060 -6.6 -9.2 anthranilate phosphoribosyltransferase compare
ABI39_RS21075 -6.5 -8.9 tryptophan synthase subunit alpha compare
ABI39_RS10435 -6.5 -12.4 cofactor-independent phosphoglycerate mutase compare
ABI39_RS21065 -6.5 -8.3 indole-3-glycerol phosphate synthase TrpC compare
ABI39_RS16910 -6.4 -10.9 3-phosphoglycerate dehydrogenase compare
ABI39_RS02870 -6.4 -10.2 acetylornithine carbamoyltransferase compare
ABI39_RS02875 -6.4 -13.5 glutamate-5-semialdehyde dehydrogenase compare
ABI39_RS10505 -6.3 -11.2 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
ABI39_RS17420 -6.3 -9.5 serine hydroxymethyltransferase compare
ABI39_RS04695 -6.3 -8.5 shikimate kinase compare
ABI39_RS19930 -6.3 -5.1 imidazole glycerol phosphate synthase subunit HisF compare
ABI39_RS01300 -6.3 -11.9 NADP-specific glutamate dehydrogenase compare
ABI39_RS10195 -6.3 -8.5 2-isopropylmalate synthase compare
ABI39_RS10440 -6.1 -10.8 threonine synthase compare
ABI39_RS12675 -6.1 -7.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABI39_RS12720 -6.1 -16.1 biosynthetic-type acetolactate synthase large subunit compare
ABI39_RS07790 -6.0 -11.8 M20 family metallo-hydrolase compare
ABI39_RS12645 -6.0 -15.4 chorismate synthase compare
ABI39_RS11845 -6.0 -10.1 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
ABI39_RS11830 -6.0 -6.1 ATP phosphoribosyltransferase compare
ABI39_RS06250 -6.0 -15.5 4-phosphoerythronate dehydrogenase PdxB compare
ABI39_RS02500 -6.0 -10.7 pyridoxine 5'-phosphate synthase compare
ABI39_RS12735 -6.0 -8.2 ketol-acid reductoisomerase compare
ABI39_RS02880 -5.9 -10.2 glutamate 5-kinase compare
ABI39_RS04795 -5.8 -4.0 M28 family peptidase compare
ABI39_RS17315 -5.8 -13.4 alpha amylase C-terminal domain-containing protein compare
ABI39_RS10495 -5.8 -11.0 prephenate dehydrogenase compare
ABI39_RS12665 -5.7 -8.8 shikimate dehydrogenase compare
ABI39_RS10430 -5.7 -15.4 bifunctional aspartate kinase/homoserine dehydrogenase I compare
ABI39_RS02960 -5.7 -15.5 pyrroline-5-carboxylate reductase compare
ABI39_RS11840 -5.6 -7.6 histidinol-phosphate transaminase compare
ABI39_RS06670 -5.5 -16.0 2-oxoacid:acceptor oxidoreductase subunit alpha compare
ABI39_RS09575 -5.4 -3.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
ABI39_RS06675 -5.4 -8.2 2-oxoacid:ferredoxin oxidoreductase subunit beta compare
ABI39_RS12725 -5.3 -8.3 acetolactate synthase small subunit compare
ABI39_RS10210 -5.0 -11.7 2-isopropylmalate synthase compare
ABI39_RS10500 -4.9 -8.2 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase type II compare
ABI39_RS19920 -4.8 -9.0 imidazole glycerol phosphate synthase subunit HisH compare
ABI39_RS10870 -4.8 -12.0 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD compare
ABI39_RS01360 -4.7 -10.1 hypothetical protein compare
ABI39_RS00205 -4.7 -3.2 phosphoglucosamine mutase compare
ABI39_RS04245 -4.7 -3.0 5-(carboxyamino)imidazole ribonucleotide mutase compare
ABI39_RS17140 -4.6 -3.2 AAA family ATPase compare
ABI39_RS14560 -4.5 -5.0 aspartate 1-decarboxylase compare
ABI39_RS12955 -4.4 -4.3 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
ABI39_RS08035 -4.4 -3.0 adenylosuccinate lyase compare
ABI39_RS05175 -4.3 -7.9 4-hydroxy-tetrahydrodipicolinate reductase compare
ABI39_RS18745 -4.2 -7.1 pyruvate:ferredoxin (flavodoxin) oxidoreductase compare
ABI39_RS17950 -4.2 -2.9 Crp/Fnr family transcriptional regulator compare
ABI39_RS04885 -4.2 -4.1 calcium-translocating P-type ATPase, PMCA-type compare
ABI39_RS19950 -4.2 -2.9 diaminopimelate decarboxylase compare
ABI39_RS17170 -4.2 -2.9 protein BatD compare
ABI39_RS10640 -4.2 -11.7 serine dehydratase subunit alpha family protein compare
ABI39_RS04230 -4.1 -6.8 RNA polymerase factor sigma-54 compare
ABI39_RS19945 -4.0 -12.2 aspartate kinase compare
ABI39_RS04425 -4.0 -14.1 hypothetical protein compare
ABI39_RS02755 -3.8 -4.5 glycosyltransferase compare
ABI39_RS19985 -3.8 -3.4 pyridoxal phosphate-dependent aminotransferase compare
ABI39_RS17175 -3.8 -6.8 tetratricopeptide repeat protein compare
ABI39_RS02965 -3.8 -12.7 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme compare
ABI39_RS01415 -3.8 -3.6 branched-chain amino acid aminotransferase compare
ABI39_RS04690 -3.6 -11.1 biosynthetic arginine decarboxylase compare
ABI39_RS04505 -3.6 -6.9 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
ABI39_RS12755 -3.5 -2.4 SurA N-terminal domain-containing protein compare
ABI39_RS17160 -3.4 -3.3 VWA domain-containing protein compare
ABI39_RS09845 -3.3 -2.2 (d)CMP kinase compare
ABI39_RS14225 -3.1 -9.6 glycosyltransferase compare
ABI39_RS10110 -3.0 -11.2 S9 family peptidase compare
ABI39_RS09685 -3.0 -3.4 hypothetical protein compare
ABI39_RS17945 -3.0 -13.5 glutamine synthetase III compare
ABI39_RS11405 -3.0 -9.3 hypothetical protein compare
ABI39_RS13000 -3.0 -6.2 sigma-54-dependent Fis family transcriptional regulator compare
ABI39_RS16870 -2.9 -4.8 Na(+)-translocating NADH-quinone reductase subunit A compare
ABI39_RS04860 -2.9 -2.5 HigA family addiction module antidote protein compare
ABI39_RS02470 -2.9 -6.4 ATP-dependent DNA helicase RecG compare
ABI39_RS17640 -2.9 -5.4 YebC/PmpR family DNA-binding transcriptional regulator compare
ABI39_RS12770 -2.8 -3.8 hypothetical protein compare
ABI39_RS07090 -2.8 -2.1 hypothetical protein compare
ABI39_RS04700 -2.7 -3.7 type I DNA topoisomerase compare
ABI39_RS05450 -2.7 -5.5 redox-regulated ATPase YchF compare
ABI39_RS21350 -2.7 -1.9 aspartate--ammonia ligase compare
ABI39_RS06995 -2.7 -10.4 tetratricopeptide repeat protein compare
ABI39_RS15415 -2.7 -7.3 hypothetical protein compare
ABI39_RS06115 -2.6 -11.2 phosphatase PAP2 family protein compare
ABI39_RS13185 -2.6 -2.5 manganese efflux pump compare
ABI39_RS17320 -2.6 -1.9 YhcH/YjgK/YiaL family protein compare
ABI39_RS08195 -2.5 -7.2 hypothetical protein compare
ABI39_RS09855 -2.5 -5.0 polyprenyl synthetase family protein compare
ABI39_RS09230 -2.4 -2.2 hypothetical protein compare
ABI39_RS07010 -2.3 -3.5 pyruvate kinase compare
ABI39_RS11670 -2.3 -3.1 molecular chaperone DnaJ compare
ABI39_RS14230 -2.3 -12.3 alpha-amylase compare
ABI39_RS04435 -2.2 -16.9 glycoside hydrolase family 97 protein compare
ABI39_RS17150 -2.2 -3.3 hypothetical protein compare
ABI39_RS18330 -2.1 -10.0 PD40 domain-containing protein compare
ABI39_RS00410 -2.1 -3.5 response regulator compare
ABI39_RS09195 -2.1 -2.4 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABI39_RS04400 -2.1 -13.8 4-alpha-glucanotransferase compare
ABI39_RS20615 -2.1 -9.7 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
ABI39_RS14030 -2.1 -4.4 MFS transporter compare
ABI39_RS08305 -2.0 -8.4 DUF4831 family protein compare
ABI39_RS16880 -2.0 -3.9 Na(+)-translocating NADH-quinone reductase subunit C compare
ABI39_RS17755 -2.0 -4.2 thiazole synthase compare
ABI39_RS21055 -2.0 -3.3 aminodeoxychorismate/anthranilate synthase component II compare
ABI39_RS02985 -2.0 -5.0 arginine repressor compare
ABI39_RS12560 -1.9 -9.8 GGGtGRT protein compare
ABI39_RS04405 -1.8 -8.0 SLC45 family MFS transporter conserved
ABI39_RS11940 -1.8 -12.6 saccharopine dehydrogenase family protein compare
ABI39_RS15360 -1.8 -3.7 Na+/H+ antiporter NhaC family protein compare
ABI39_RS17775 -1.8 -8.7 2-iminoacetate synthase ThiH compare
ABI39_RS17780 -1.8 -9.3 HesA/MoeB/ThiF family protein compare
ABI39_RS12565 -1.8 -7.6 hypothetical protein compare
ABI39_RS01325 -1.8 -9.3 phosphoenolpyruvate synthase compare
ABI39_RS04970 -1.7 -5.6 Holliday junction branch migration DNA helicase RuvB compare
ABI39_RS14265 -1.7 -8.7 ATP-dependent dethiobiotin synthetase BioD compare
ABI39_RS12980 -1.7 -3.3 HAD family hydrolase compare
ABI39_RS16895 -1.7 -3.6 NADH:ubiquinone reductase (Na(+)-transporting) subunit F compare
ABI39_RS12945 -1.7 -2.5 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN compare
ABI39_RS06380 -1.7 -7.2 GH3 auxin-responsive promoter family protein compare
ABI39_RS19385 -1.7 -4.0 hypothetical protein compare
ABI39_RS14250 -1.7 -8.5 8-amino-7-oxononanoate synthase compare
ABI39_RS00515 -1.7 -3.8 hypothetical protein compare
ABI39_RS17795 -1.6 -6.6 thiamine phosphate synthase compare
ABI39_RS15410 -1.6 -4.4 DUF4296 domain-containing protein compare
ABI39_RS20965 -1.6 -2.2 SPOR domain-containing protein compare
ABI39_RS16875 -1.5 -3.3 NADH:ubiquinone reductase (Na(+)-transporting) subunit B compare
ABI39_RS14245 -1.5 -9.6 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
ABI39_RS10650 -1.5 -9.9 AraC family transcriptional regulator compare
ABI39_RS17750 -1.5 -3.0 thiamine phosphate synthase compare
ABI39_RS19915 -1.5 -6.6 formyltetrahydrofolate deformylase compare
ABI39_RS06010 -1.4 -7.9 polysaccharide deacetylase family protein compare
ABI39_RS00520 -1.4 -8.5 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
ABI39_RS07000 -1.4 -2.5 site-specific tyrosine recombinase XerD compare
ABI39_RS13180 -1.4 -3.9 FAD:protein FMN transferase compare
ABI39_RS09515 -1.4 -2.6 nucleoside deaminase compare
ABI39_RS13150 -1.4 -7.9 S41 family peptidase compare
ABI39_RS16885 -1.4 -2.8 NADH:ubiquinone reductase (Na(+)-transporting) subunit D compare
ABI39_RS12970 -1.3 -5.3 CDP-alcohol phosphatidyltransferase family protein compare
ABI39_RS18300 -1.3 -3.8 bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase compare
ABI39_RS14260 -1.3 -6.8 malonyl-ACP O-methyltransferase BioC compare
ABI39_RS17730 -1.3 -7.9 carboxynorspermidine decarboxylase compare
ABI39_RS06060 -1.3 -3.5 S9 family peptidase compare
ABI39_RS09850 -1.3 -3.7 energy transducer TonB compare
ABI39_RS00090 -1.3 -4.7 HAMP domain-containing histidine kinase compare
ABI39_RS04930 -1.3 -3.2 helix-turn-helix transcriptional regulator compare
ABI39_RS17770 -1.3 -3.4 flavodoxin family protein compare
ABI39_RS04280 -1.3 -3.7 DUF4292 domain-containing protein compare
ABI39_RS16305 -1.3 -1.3 DUF4141 domain-containing protein compare
ABI39_RS14240 -1.3 -5.2 biotin synthase BioB compare
ABI39_RS04285 -1.3 -7.6 tetratricopeptide repeat protein compare
ABI39_RS03830 -1.2 -1.3 ribosome-associated translation inhibitor RaiA compare
ABI39_RS05765 -1.2 -1.7 DUF4294 domain-containing protein compare
ABI39_RS03880 -1.2 -8.6 PDZ domain-containing protein compare
ABI39_RS08850 -1.2 -4.4 toprim domain-containing protein compare
ABI39_RS16700 -1.2 -4.2 agmatine deiminase family protein compare
ABI39_RS11655 -1.2 -2.9 MFS transporter compare
ABI39_RS17745 -1.1 -2.2 sulfur carrier protein ThiS compare
ABI39_RS17765 -1.1 -2.4 hypothetical protein compare
ABI39_RS22175 -1.1 -1.5 N-acetylmuramoyl-L-alanine amidase compare
ABI39_RS18740 -1.1 -4.6 ATP-binding protein compare
ABI39_RS06920 -1.1 -4.2 glycosyltransferase compare
ABI39_RS01040 -1.0 -2.3 L-rhamnose mutarotase compare
ABI39_RS16520 -1.0 -6.4 endopeptidase La compare
ABI39_RS02140 -1.0 -1.9 TetR/AcrR family transcriptional regulator compare
ABI39_RS22225 -1.0 -1.3 hypothetical protein compare
ABI39_RS04145 -1.0 -1.9 transcription elongation factor GreA compare
ABI39_RS14235 -1.0 -3.1 hypothetical protein compare
ABI39_RS06050 -1.0 -2.6 hypothetical protein compare
ABI39_RS15840 -1.0 -3.5 hypothetical protein compare
ABI39_RS03160 -1.0 -1.9 helix-turn-helix domain-containing protein compare
ABI39_RS17760 -1.0 -4.2 phosphomethylpyrimidine synthase ThiC compare
ABI39_RS16620 -1.0 -1.0 phage integrase SAM-like domain-containing protein compare
ABI39_RS12420 -1.0 -4.9 OadG family protein compare
ABI39_RS11735 -1.0 -2.5 HlyD family efflux transporter periplasmic adaptor subunit compare
ABI39_RS07655 -0.9 -1.2 peptidase M15 compare
ABI39_RS02480 -0.9 -3.8 DJ-1/PfpI family protein compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source D-Maltose monohydrate in Phocaeicola dorei CL03T12C01

For carbon source D-Maltose monohydrate across organisms