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Experiment set1S418 for
Erwinia tracheiphila SCR3
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Experiment:TE, Melon 3 Petiole 3 (TE-S-M3-P3)
200 most important genes:
gene
name
fitness
t score
description
LU632
_RS23980
tatC
-6.3
-4.4
Sec-independent protein translocase subunit TatC
compare
LU632
_RS08885
-5.8
-3.3
ABC transporter ATP-binding protein
compare
LU632
_RS15245
purE
-5.7
-2.1
5-(carboxyamino)imidazole ribonucleotide mutase
compare
LU632
_RS08880
-5.4
-2.4
ABC transporter permease
compare
LU632
_RS16115
sdhC
-5.2
-3.6
succinate dehydrogenase cytochrome b556 subunit
compare
LU632
_RS25495
-4.9
-1.1
type II toxin-antitoxin system MqsA family antitoxin
compare
LU632
_RS21875
gpsA
-4.9
-3.4
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
compare
LU632
_RS21235
mlaD
-4.9
-4.7
outer membrane lipid asymmetry maintenance protein MlaD
compare
LU632
_RS24725
-4.7
-1.7
hypothetical protein
compare
LU632
_RS16110
sdhD
-4.6
-3.2
succinate dehydrogenase membrane anchor subunit
compare
LU632
_RS17820
ndk
-4.5
-1.7
nucleoside-diphosphate kinase
compare
LU632
_RS16120
-4.5
-15.4
citrate synthase
compare
LU632
_RS18045
-4.4
-1.0
hypothetical protein
compare
LU632
_RS21445
mreC
-4.4
-1.4
rod shape-determining protein MreC
compare
LU632
_RS20900
argF
-4.4
-3.1
ornithine carbamoyltransferase
compare
LU632
_RS09955
pyrD
-4.4
-3.0
quinone-dependent dihydroorotate dehydrogenase
compare
LU632
_RS07865
purF
-4.4
-3.0
amidophosphoribosyltransferase
compare
LU632
_RS08790
-4.4
-3.0
EpsG family protein
compare
LU632
_RS21360
degS
-4.3
-8.3
outer membrane-stress sensor serine endopeptidase DegS
compare
LU632
_RS21755
-4.3
-3.0
adenylosuccinate synthase
compare
LU632
_RS08785
-4.3
-2.9
glycosyltransferase family 2 protein
compare
LU632
_RS09475
mntR
-4.3
-2.0
manganese-binding transcriptional regulator MntR
compare
LU632
_RS08950
hisG
-4.2
-4.1
ATP phosphoribosyltransferase
compare
LU632
_RS22140
glnL
-4.2
-5.0
nitrogen regulation protein NR(II)
compare
LU632
_RS19585
sthA
-4.2
-4.1
Si-specific NAD(P)(+) transhydrogenase
compare
LU632
_RS02865
leuD
-4.2
-5.0
3-isopropylmalate dehydratase small subunit
compare
LU632
_RS21245
mlaF
-4.1
-2.9
phospholipid ABC transporter ATP-binding protein MlaF
compare
LU632
_RS17615
-4.1
-2.5
YejL family protein
compare
LU632
_RS04250
yiaK
-4.1
-2.3
3-dehydro-L-gulonate 2-dehydrogenase
compare
LU632
_RS06615
ptsI
-4.0
-2.8
phosphoenolpyruvate-protein phosphotransferase PtsI
compare
LU632
_RS19270
ftsX
-4.0
-9.4
permease-like cell division protein FtsX
compare
LU632
_RS21240
mlaE
-4.0
-2.6
lipid asymmetry maintenance ABC transporter permease subunit MlaE
compare
LU632
_RS07220
-4.0
-2.1
hypothetical protein
compare
LU632
_RS08815
-4.0
-2.4
colanic acid biosynthesis glycosyltransferase WcaL
compare
LU632
_RS05960
sdhE
-3.9
-2.1
FAD assembly factor SdhE
compare
LU632
_RS03310
-3.9
-7.1
sucrose-6-phosphate hydrolase
compare
LU632
_RS02100
-3.9
-2.7
hemolysin family protein
compare
LU632
_RS16480
-3.9
-2.7
4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase
compare
LU632
_RS17420
-3.9
-0.9
phosphatidylinositol-specific phospholipase C domain-containing protein
compare
LU632
_RS16100
-3.8
-2.6
succinate dehydrogenase iron-sulfur subunit
compare
LU632
_RS25020
-3.8
-0.8
hypothetical protein
compare
LU632
_RS03250
-3.8
-2.7
type III secretion system protein
compare
LU632
_RS04780
-3.7
-0.8
replication initiation protein
compare
LU632
_RS02870
leuC
-3.7
-3.6
3-isopropylmalate dehydratase large subunit
compare
LU632
_RS02875
leuB
-3.7
-3.6
3-isopropylmalate dehydrogenase
compare
LU632
_RS14735
-3.7
-4.5
glycine zipper 2TM domain-containing protein
compare
LU632
_RS22810
-3.7
-2.6
aspartate aminotransferase family protein
compare
LU632
_RS20695
bacA
-3.7
-3.0
undecaprenyl-diphosphate phosphatase
compare
LU632
_RS16250
nagA
-3.7
-5.1
N-acetylglucosamine-6-phosphate deacetylase
compare
LU632
_RS20950
pyrB
-3.7
-2.5
aspartate carbamoyltransferase
compare
LU632
_RS08805
-3.6
-3.6
phage tailspike protein
compare
LU632
_RS19770
-3.6
-7.4
amino acid ABC transporter substrate-binding protein
compare
LU632
_RS15425
rpoE
-3.6
-5.0
RNA polymerase sigma factor RpoE
compare
LU632
_RS08930
hisH
-3.6
-2.5
imidazole glycerol phosphate synthase subunit HisH
compare
LU632
_RS02750
carB
-3.6
-2.5
carbamoyl-phosphate synthase large subunit
compare
LU632
_RS17975
purL
-3.6
-2.5
phosphoribosylformylglycinamidine synthase
compare
LU632
_RS02910
rsmH
-3.6
-5.3
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
compare
LU632
_RS08915
hisIE
-3.6
-2.3
bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE
compare
LU632
_RS12325
-3.6
-1.8
H-NS histone family protein
compare
LU632
_RS16105
sdhA
-3.5
-2.4
succinate dehydrogenase flavoprotein subunit
compare
LU632
_RS16880
-3.5
-0.8
DTW domain-containing protein
compare
LU632
_RS19775
-3.5
-7.4
amino acid ABC transporter permease
compare
LU632
_RS19275
ftsE
-3.4
-3.0
cell division ATP-binding protein FtsE
compare
LU632
_RS21085
secG
-3.4
-1.7
preprotein translocase subunit SecG
compare
LU632
_RS12500
pyrF
-3.4
-2.4
orotidine-5'-phosphate decarboxylase
compare
LU632
_RS07995
nuoH
-3.4
-2.2
NADH-quinone oxidoreductase subunit NuoH
compare
LU632
_RS04270
ulaD
-3.4
-5.0
3-keto-L-gulonate-6-phosphate decarboxylase UlaD
compare
LU632
_RS04305
-3.4
-0.7
DNA primase
compare
LU632
_RS21230
mlaC
-3.4
-4.6
phospholipid-binding protein MlaC
compare
LU632
_RS03305
-3.3
-7.6
sucrose-specific PTS transporter subunit IIBC
compare
LU632
_RS16090
odhB
-3.3
-1.6
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase
compare
LU632
_RS07300
mlaA
-3.3
-5.4
phospholipid-binding lipoprotein MlaA
compare
LU632
_RS05130
-3.3
-0.7
TIGR03750 family conjugal transfer protein
compare
LU632
_RS09245
-3.2
-2.2
L,D-transpeptidase family protein
compare
LU632
_RS08820
-3.2
-2.2
lipopolysaccharide biosynthesis protein
compare
LU632
_RS01085
-3.2
-1.7
class I SAM-dependent methyltransferase
compare
LU632
_RS21225
mlaB
-3.2
-3.6
lipid asymmetry maintenance protein MlaB
compare
LU632
_RS13085
dsbB
-3.2
-4.1
disulfide bond formation protein DsbB
compare
LU632
_RS19615
argC
-3.2
-5.1
N-acetyl-gamma-glutamyl-phosphate reductase
compare
LU632
_RS24260
trxA
-3.2
-2.4
thioredoxin TrxA
compare
LU632
_RS19610
argB
-3.2
-1.8
acetylglutamate kinase
compare
LU632
_RS08780
wzc
-3.2
-2.2
tyrosine-protein kinase Wzc
compare
LU632
_RS19605
-3.2
-4.4
argininosuccinate synthase
compare
LU632
_RS05855
serA
-3.2
-6.8
phosphoglycerate dehydrogenase
compare
LU632
_RS07975
nuoC
-3.2
-4.9
NADH-quinone oxidoreductase subunit C/D
compare
LU632
_RS04140
-3.2
-0.7
terminase family protein
compare
LU632
_RS02880
leuA
-3.2
-6.5
2-isopropylmalate synthase
compare
LU632
_RS07775
aroC
-3.2
-2.2
chorismate synthase
compare
LU632
_RS10625
-3.2
-1.2
N-acetylmuramoyl-L-alanine amidase
compare
LU632
_RS10340
pyrC
-3.2
-2.2
dihydroorotase
compare
LU632
_RS08775
-3.2
-2.2
protein tyrosine phosphatase
compare
LU632
_RS03890
-3.2
-0.7
hypothetical protein
compare
LU632
_RS14375
-3.1
-0.7
excisionase
compare
LU632
_RS22135
glnG
-3.1
-2.2
nitrogen regulation protein NR(I)
compare
LU632
_RS07980
nuoE
-3.1
-1.0
NADH-quinone oxidoreductase subunit NuoE
compare
LU632
_RS06610
crr
-3.1
-1.7
PTS glucose transporter subunit IIA
compare
LU632
_RS08935
hisB
-3.1
-2.2
bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB
compare
LU632
_RS03300
-3.1
-12.8
carbohydrate porin
compare
LU632
_RS23035
-3.1
-0.7
helix-turn-helix domain-containing protein
compare
LU632
_RS08275
purM
-3.1
-2.2
phosphoribosylformylglycinamidine cyclo-ligase
compare
LU632
_RS07970
-3.1
-4.7
NADH-quinone oxidoreductase subunit B
compare
LU632
_RS06040
lysA
-3.1
-4.2
diaminopimelate decarboxylase
compare
LU632
_RS08940
hisC
-3.1
-3.7
histidinol-phosphate transaminase
compare
LU632
_RS19930
rseP
-3.1
-3.6
sigma E protease regulator RseP
compare
LU632
_RS10690
-3.0
-1.3
hypothetical protein
compare
LU632
_RS14835
plsX
-3.0
-2.1
phosphate acyltransferase PlsX
compare
LU632
_RS15405
-3.0
-1.3
IS6 family transposase
compare
LU632
_RS21930
-3.0
-7.0
glycosyltransferase
compare
LU632
_RS10250
-3.0
-0.9
phospholipase D family protein
compare
LU632
_RS08920
hisF
-3.0
-2.1
imidazole glycerol phosphate synthase subunit HisF
compare
LU632
_RS07985
nuoF
-3.0
-3.5
NADH-quinone oxidoreductase subunit NuoF
compare
LU632
_RS08770
-2.9
-2.0
polysaccharide export protein
compare
LU632
_RS02140
-2.9
-1.2
ribosome-associated protein
compare
LU632
_RS01015
purD
-2.9
-2.0
phosphoribosylamine--glycine ligase
compare
LU632
_RS19600
argH
-2.9
-5.2
argininosuccinate lyase
compare
LU632
_RS14010
ldcA
-2.9
-2.0
muramoyltetrapeptide carboxypeptidase
compare
LU632
_RS08000
nuoI
-2.9
-3.8
NADH-quinone oxidoreductase subunit NuoI
compare
LU632
_RS07965
-2.9
-3.1
NADH-quinone oxidoreductase subunit A
compare
LU632
_RS08025
nuoN
-2.9
-2.0
NADH-quinone oxidoreductase subunit NuoN
compare
LU632
_RS17805
rodZ
-2.8
-0.9
cytoskeleton protein RodZ
compare
LU632
_RS04280
araD
-2.8
-8.0
L-ribulose-5-phosphate 4-epimerase
compare
LU632
_RS07860
cvpA
-2.8
-3.6
colicin V production protein
compare
LU632
_RS17035
-2.8
-0.6
DinI family protein
compare
LU632
_RS24840
kup
-2.8
-4.3
low affinity potassium transporter Kup
compare
LU632
_RS21345
-2.8
-9.7
cell division protein ZapE
compare
LU632
_RS08335
-2.8
-1.2
phosphoribosylaminoimidazolesuccinocarboxamide synthase
compare
LU632
_RS19780
-2.8
-5.9
amino acid ABC transporter permease
compare
LU632
_RS24270
gppA
-2.8
-1.2
guanosine-5'-triphosphate,3'-diphosphate diphosphatase
compare
LU632
_RS05475
-2.8
-2.5
YqgE/AlgH family protein
compare
LU632
_RS05025
-2.7
-0.6
TIGR03749 family integrating conjugative element protein
compare
LU632
_RS07990
nuoG
-2.7
-5.2
NADH-quinone oxidoreductase subunit NuoG
compare
LU632
_RS08925
hisA
-2.7
-1.3
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
compare
LU632
_RS09795
aroA
-2.7
-6.3
3-phosphoshikimate 1-carboxyvinyltransferase
compare
LU632
_RS24345
-2.7
-0.6
hypothetical protein
compare
LU632
_RS08795
-2.7
-5.8
glycosyltransferase
compare
LU632
_RS08280
upp
-2.7
-1.3
uracil phosphoribosyltransferase
compare
LU632
_RS02755
carA
-2.7
-6.8
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
compare
LU632
_RS18505
yajC
-2.7
-0.6
preprotein translocase subunit YajC
compare
LU632
_RS08945
hisD
-2.7
-3.6
histidinol dehydrogenase
compare
LU632
_RS15250
purK
-2.7
-1.8
5-(carboxyamino)imidazole ribonucleotide synthase
compare
LU632
_RS24405
-2.6
-7.6
branched-chain amino acid transaminase
compare
LU632
_RS08015
nuoL
-2.6
-5.3
NADH-quinone oxidoreductase subunit L
compare
LU632
_RS12940
purU
-2.6
-9.0
formyltetrahydrofolate deformylase
compare
LU632
_RS14745
-2.6
-0.8
IS5 family transposase
compare
LU632
_RS16835
mprA
-2.6
-3.8
transcriptional repressor MprA
compare
LU632
_RS19815
gmhB
-2.6
-1.0
D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase
compare
LU632
_RS08800
-2.6
-1.2
glycosyltransferase
compare
LU632
_RS17465
mepS
-2.6
-10.1
bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase
compare
LU632
_RS19620
argE
-2.6
-1.8
acetylornithine deacetylase
compare
LU632
_RS10785
tagH
-2.6
-12.2
type VI secretion system-associated FHA domain protein TagH
compare
LU632
_RS11085
-2.6
-2.4
hypothetical protein
compare
LU632
_RS20270
-2.5
-0.6
IS5 family transposase
compare
LU632
_RS21880
secB
-2.5
-1.7
protein-export chaperone SecB
compare
LU632
_RS15830
-2.5
-0.8
Arm DNA-binding domain-containing protein
compare
LU632
_RS16415
tatE
-2.5
-0.6
twin-arginine translocase subunit TatE
compare
LU632
_RS04260
-2.5
-6.0
MFS transporter
compare
LU632
_RS24250
wecA
-2.5
-10.0
UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase
compare
LU632
_RS00695
-2.5
-0.5
fimbria/pilus periplasmic chaperone
compare
LU632
_RS13905
-2.5
-1.1
DUF6388 family protein
compare
LU632
_RS10790
tagF
-2.5
-7.0
type VI secretion system-associated protein TagF
compare
LU632
_RS10185
-2.5
-0.7
tail fiber assembly protein
compare
LU632
_RS13375
-2.4
-0.8
transcriptional regulator
compare
LU632
_RS24205
rffM
-2.4
-8.8
lipopolysaccharide N-acetylmannosaminouronosyltransferase
compare
LU632
_RS14580
hflD
-2.4
-6.0
high frequency lysogenization protein HflD
compare
LU632
_RS02050
miaA
-2.4
-2.9
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
compare
LU632
_RS08020
nuoM
-2.4
-3.3
NADH-quinone oxidoreductase subunit M
compare
LU632
_RS24300
-2.4
-1.4
transposase
compare
LU632
_RS18455
panE
-2.4
-4.3
2-dehydropantoate 2-reductase
compare
LU632
_RS14240
-2.4
-2.8
phage antirepressor KilAC domain-containing protein
compare
LU632
_RS15905
galT
-2.4
-2.9
galactose-1-phosphate uridylyltransferase
compare
LU632
_RS21955
-2.4
-0.9
glycosyltransferase family 4 protein
compare
LU632
_RS16095
sucA
-2.4
-1.6
2-oxoglutarate dehydrogenase E1 component
compare
LU632
_RS14845
yceD
-2.3
-0.7
23S rRNA accumulation protein YceD
compare
LU632
_RS06210
argA
-2.3
-1.6
amino-acid N-acetyltransferase
compare
LU632
_RS24225
rffA
-2.3
-10.9
dTDP-4-amino-4,6-dideoxygalactose transaminase
compare
LU632
_RS04265
-2.3
-9.1
carbohydrate kinase
compare
LU632
_RS15445
tyrA
-2.2
-6.7
bifunctional chorismate mutase/prephenate dehydrogenase
compare
LU632
_RS14855
rluC
-2.2
-3.4
23S rRNA pseudouridine(955/2504/2580) synthase RluC
compare
LU632
_RS22015
pyrE
-2.2
-1.5
orotate phosphoribosyltransferase
compare
LU632
_RS02590
gpmB
-2.2
-2.1
2,3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB
compare
LU632
_RS06410
-2.2
-1.0
phosphoadenylyl-sulfate reductase
compare
LU632
_RS19785
-2.2
-4.0
amino acid ABC transporter ATP-binding protein
compare
LU632
_RS18700
-2.2
-1.8
HI1506-related protein
compare
LU632
_RS12910
-2.2
-1.5
NAD-dependent epimerase
compare
LU632
_RS19960
-2.2
-0.8
hypothetical protein
compare
LU632
_RS02450
-2.2
-0.6
hypothetical protein
compare
LU632
_RS06735
-2.1
-5.9
DUF1176 domain-containing protein
compare
LU632
_RS08010
nuoK
-2.1
-2.1
NADH-quinone oxidoreductase subunit NuoK
compare
LU632
_RS07905
-2.1
-0.8
IS91 family transposase
compare
LU632
_RS13950
ychF
-2.1
-1.3
redox-regulated ATPase YchF
compare
LU632
_RS19100
-2.1
-0.9
hypothetical protein
compare
LU632
_RS08005
nuoJ
-2.1
-2.5
NADH-quinone oxidoreductase subunit J
compare
LU632
_RS18995
proC
-2.1
-2.5
pyrroline-5-carboxylate reductase
compare
LU632
_RS16990
bamE
-2.1
-1.4
outer membrane protein assembly factor BamE
compare
LU632
_RS21260
kdsC
-2.1
-3.4
3-deoxy-manno-octulosonate-8-phosphatase KdsC
compare
LU632
_RS02615
thrB
-2.1
-1.4
homoserine kinase
compare
LU632
_RS02555
nadR
-2.1
-5.9
multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR
compare
LU632
_RS04275
-2.1
-4.1
L-ribulose-5-phosphate 3-epimerase
compare
LU632
_RS21365
mdh
-2.1
-4.0
malate dehydrogenase
compare
LU632
_RS04065
-2.1
-1.6
AlpA family phage regulatory protein
compare
Specific Phenotypes
For 2 genes in this experiment