Experiment set1S415 for Phocaeicola dorei CL03T12C01

Compare to:

N-Acetyl-D-Glucosamine carbon source

200 most detrimental genes:

  gene name fitness t score description  
ABI39_RS01900 +1.0 8.7 4Fe-4S dicluster domain-containing protein compare
ABI39_RS21955 +1.0 2.0 DUF4133 domain-containing protein compare
ABI39_RS12450 +1.0 3.8 Rossmann-like and DUF2520 domain-containing protein compare
ABI39_RS17335 +0.9 7.4 phosphatidylinositol-4-phosphate 5-kinase compare
ABI39_RS01910 +0.9 6.7 [FeFe] hydrogenase H-cluster radical SAM maturase HydG compare
ABI39_RS01905 +0.8 4.8 [FeFe] hydrogenase H-cluster radical SAM maturase HydE compare
ABI39_RS15400 +0.7 4.9 TraR/DksA C4-type zinc finger protein compare
ABI39_RS01915 +0.7 5.0 [FeFe] hydrogenase H-cluster maturation GTPase HydF compare
ABI39_RS14835 +0.7 1.7 DNA-binding protein compare
ABI39_RS10360 +0.6 4.8 homoserine O-succinyltransferase compare
ABI39_RS02460 +0.6 2.2 peptidoglycan DD-metalloendopeptidase family protein compare
ABI39_RS19820 +0.6 1.8 hypothetical protein compare
ABI39_RS14130 +0.6 2.0 hypothetical protein compare
ABI39_RS14995 +0.6 2.3 F0F1 ATP synthase subunit B compare
ABI39_RS19750 +0.6 1.5 tRNA-Tyr compare
ABI39_RS16385 +0.6 0.9 hypothetical protein compare
ABI39_RS22750 +0.5 1.5 hypothetical protein compare
ABI39_RS14680 +0.5 2.8 methylcobamide--CoM methyltransferase compare
ABI39_RS18580 +0.5 1.8 ATP-binding protein compare
ABI39_RS19590 +0.5 1.7 DUF3127 domain-containing protein compare
ABI39_RS19745 +0.5 2.7 hypothetical protein compare
ABI39_RS12135 +0.5 3.7 1,4-dihydroxy-2-naphthoyl-CoA synthase compare
ABI39_RS14970 +0.5 3.6 F0F1 ATP synthase subunit beta compare
ABI39_RS19630 +0.5 1.5 hypothetical protein compare
ABI39_RS19760 +0.5 1.3 tRNA-Gln compare
ABI39_RS00755 +0.5 3.9 hypothetical protein compare
ABI39_RS16935 +0.5 2.3 ferredoxin compare
ABI39_RS14000 +0.5 1.6 hypothetical protein compare
ABI39_RS06910 +0.5 3.8 5'-methylthioadenosine/adenosylhomocysteine nucleosidase compare
ABI39_RS04730 +0.5 1.5 Lrp/AsnC ligand binding domain-containing protein compare
ABI39_RS04830 +0.5 2.1 MarR family transcriptional regulator compare
ABI39_RS12780 +0.5 2.0 type III pantothenate kinase compare
ABI39_RS14035 +0.5 2.5 energy-dependent translational throttle protein EttA compare
ABI39_RS11975 +0.5 1.2 polysaccharide export protein compare
ABI39_RS19995 +0.5 1.5 DUF4494 domain-containing protein compare
ABI39_RS10370 +0.5 3.7 hypothetical protein compare
ABI39_RS09715 +0.5 3.3 lytic transglycosylase domain-containing protein compare
ABI39_RS14090 +0.5 1.6 hypothetical protein compare
ABI39_RS14335 +0.4 1.8 antitoxin compare
ABI39_RS09900 +0.4 2.6 Lrp/AsnC ligand binding domain-containing protein compare
ABI39_RS09975 +0.4 2.8 DUF1295 domain-containing protein compare
ABI39_RS03200 +0.4 1.8 helix-turn-helix transcriptional regulator compare
ABI39_RS11600 +0.4 2.8 tetratricopeptide repeat protein compare
ABI39_RS07560 +0.4 1.1 hypothetical protein compare
ABI39_RS14480 +0.4 2.8 ferrous iron transport protein B compare
ABI39_RS04825 +0.4 2.6 M15 family metallopeptidase compare
ABI39_RS21490 +0.4 2.0 pyridoxal phosphate-dependent aminotransferase compare
ABI39_RS19495 +0.4 2.1 TIGR02757 family protein compare
ABI39_RS16175 +0.4 2.3 macro domain-containing protein compare
ABI39_RS11185 +0.4 0.9 DUF3408 domain-containing protein compare
ABI39_RS19870 +0.4 0.8 hypothetical protein compare
ABI39_RS12405 +0.4 2.2 cyclomaltodextrinase C-terminal domain-containing protein compare
ABI39_RS18940 +0.4 0.8 HIT family protein compare
ABI39_RS06620 +0.4 1.6 HU family DNA-binding protein compare
ABI39_RS20860 +0.4 0.7 HU family DNA-binding protein compare
ABI39_RS19940 +0.4 1.7 ATP-binding cassette domain-containing protein compare
ABI39_RS11000 +0.4 0.8 hypothetical protein compare
ABI39_RS07575 +0.4 1.4 hypothetical protein compare
ABI39_RS04240 +0.4 2.4 glycine cleavage system protein GcvH compare
ABI39_RS19875 +0.4 1.5 hypothetical protein compare
ABI39_RS21910 +0.4 1.1 hypothetical protein compare
ABI39_RS08295 +0.4 1.3 DUF3332 domain-containing protein compare
ABI39_RS04010 +0.4 2.8 magnesium transporter CorA family protein compare
ABI39_RS04135 +0.4 3.1 mannose-1-phosphate guanylyltransferase compare
ABI39_RS17105 +0.4 1.1 CinA family protein compare
ABI39_RS22975 +0.4 1.1 hypothetical protein compare
ABI39_RS21815 +0.4 1.1 DUF3575 domain-containing protein compare
ABI39_RS13175 +0.3 1.6 MarC family protein compare
ABI39_RS16525 +0.3 2.0 methyltransferase compare
ABI39_RS22615 +0.3 1.1 helix-turn-helix domain-containing protein compare
ABI39_RS09150 +0.3 1.7 cupin domain-containing protein compare
ABI39_RS12695 +0.3 2.3 TIGR03915 family putative DNA repair protein compare
ABI39_RS16165 +0.3 1.8 immunity protein 19 compare
ABI39_RS05080 +0.3 1.7 helix-turn-helix transcriptional regulator compare
ABI39_RS02830 +0.3 1.9 RNA-binding protein compare
ABI39_RS12120 +0.3 2.7 AMP-binding protein compare
ABI39_RS16670 +0.3 2.0 DUF2023 family protein compare
ABI39_RS04120 +0.3 1.7 helix-turn-helix domain-containing protein compare
ABI39_RS20735 +0.3 1.4 YjbH domain-containing protein compare
ABI39_RS18070 +0.3 1.2 DUF3874 domain-containing protein compare
ABI39_RS05615 +0.3 2.2 tRNA pseudouridine(55) synthase TruB compare
ABI39_RS10365 +0.3 2.6 U32 family peptidase compare
ABI39_RS01735 +0.3 2.1 acyl-CoA dehydrogenase family protein compare
ABI39_RS05465 +0.3 1.3 chloramphenicol acetyltransferase compare
ABI39_RS11775 +0.3 2.3 ABC transporter permease compare
ABI39_RS16865 +0.3 1.8 DEAD/DEAH box helicase compare
ABI39_RS01520 +0.3 1.5 hypothetical protein compare
ABI39_RS04495 +0.3 1.9 OprO/OprP family phosphate-selective porin compare
ABI39_RS00090 +0.3 1.6 HAMP domain-containing histidine kinase compare
ABI39_RS19010 +0.3 0.9 fluoride efflux transporter CrcB compare
ABI39_RS11815 +0.3 2.0 uridine kinase compare
ABI39_RS05215 +0.3 2.0 acyl-CoA thioesterase compare
ABI39_RS15875 +0.3 1.4 hypothetical protein compare
ABI39_RS04200 +0.3 2.0 Na/Pi cotransporter family protein compare
ABI39_RS16425 +0.3 0.9 site-specific integrase compare
ABI39_RS11875 +0.3 1.8 OmpH family outer membrane protein compare
ABI39_RS07695 +0.3 1.1 SIMPL domain-containing protein compare
ABI39_RS19815 +0.3 0.9 hypothetical protein compare
ABI39_RS08720 +0.3 0.9 DUF1896 domain-containing protein compare
ABI39_RS01725 +0.3 1.3 electron transfer flavoprotein subunit beta/FixA family protein compare
ABI39_RS22625 +0.3 0.7 hypothetical protein compare
ABI39_RS08750 +0.3 1.6 RteC domain-containing protein compare
ABI39_RS10965 +0.3 1.0 IS66 family transposase compare
ABI39_RS00780 +0.3 2.3 serine hydrolase compare
ABI39_RS14890 +0.3 0.5 tRNA-Asp compare
ABI39_RS19125 +0.3 1.2 hypothetical protein compare
ABI39_RS19150 +0.3 1.3 hypothetical protein compare
ABI39_RS11270 +0.3 2.4 MBL fold metallo-hydrolase compare
ABI39_RS22580 +0.3 1.0 N-acetylmuramoyl-L-alanine amidase compare
ABI39_RS17820 +0.3 2.2 polyamine ABC transporter ATP-binding protein compare
ABI39_RS20005 +0.3 1.5 dihydroorotate dehydrogenase-like protein compare
ABI39_RS13910 +0.3 0.7 chaperone modulator CbpM compare
ABI39_RS02465 +0.3 0.7 nucleoside-diphosphate kinase compare
ABI39_RS07290 +0.3 1.0 helix-turn-helix domain-containing protein compare
ABI39_RS11430 +0.3 1.2 amidohydrolase compare
ABI39_RS14415 +0.3 1.6 hemerythrin domain-containing protein compare
ABI39_RS19645 +0.3 1.1 hypothetical protein compare
ABI39_RS16770 +0.3 0.6 acyl carrier protein compare
ABI39_RS08845 +0.3 0.7 conjugal transfer protein TraO compare
ABI39_RS16090 +0.3 1.6 RteC domain-containing protein compare
ABI39_RS18170 +0.3 0.5 hypothetical protein compare
ABI39_RS15860 +0.3 1.2 hypothetical protein compare
ABI39_RS08840 +0.3 1.6 conjugative transposon protein TraN compare
ABI39_RS20700 +0.3 1.2 AAA family ATPase compare
ABI39_RS11760 +0.3 1.8 FtsX-like permease family protein compare
ABI39_RS15540 +0.3 1.6 helix-turn-helix transcriptional regulator compare
ABI39_RS21085 +0.3 1.6 response regulator transcription factor compare
ABI39_RS19990 +0.3 2.0 fucose isomerase compare
ABI39_RS09635 +0.3 1.7 type II toxin-antitoxin system RelE/ParE family toxin compare
ABI39_RS05640 +0.3 1.6 PspC domain-containing protein compare
ABI39_RS18520 +0.3 1.2 metallophosphoesterase compare
ABI39_RS12325 +0.3 2.0 hypothetical protein compare
ABI39_RS11910 +0.3 1.6 glycoside hydrolase family 16 protein compare
ABI39_RS14390 +0.3 1.1 ABC transporter ATP-binding protein compare
ABI39_RS03140 +0.3 2.0 site-specific integrase compare
ABI39_RS15555 +0.3 1.6 ABC transporter substrate-binding protein compare
ABI39_RS00105 +0.3 0.4 hypothetical protein compare
ABI39_RS21700 +0.3 1.2 PriCT-2 domain-containing protein compare
ABI39_RS15975 +0.3 0.9 hypothetical protein compare
ABI39_RS08180 +0.2 1.9 anaerobic ribonucleoside triphosphate reductase compare
ABI39_RS01100 +0.2 1.3 tRNA threonylcarbamoyladenosine dehydratase compare
ABI39_RS15535 +0.2 1.3 NAD(P)H-dependent oxidoreductase compare
ABI39_RS06165 +0.2 0.6 GtrA family protein compare
ABI39_RS10610 +0.2 1.3 uracil-DNA glycosylase family protein compare
ABI39_RS14700 +0.2 1.5 alpha-xylosidase compare
ABI39_RS17670 +0.2 1.8 efflux RND transporter periplasmic adaptor subunit compare
ABI39_RS19355 +0.2 0.6 EamA family transporter compare
ABI39_RS09555 +0.2 0.9 immunity 17 family protein compare
ABI39_RS23170 +0.2 1.7 hypothetical protein compare
ABI39_RS15460 +0.2 1.4 MBL fold metallo-hydrolase compare
ABI39_RS08555 +0.2 1.3 Trk system potassium transporter TrkA compare
ABI39_RS12685 +0.2 1.6 hypothetical protein compare
ABI39_RS14170 +0.2 1.3 GNAT family N-acetyltransferase compare
ABI39_RS18150 +0.2 1.7 16S rRNA (uracil(1498)-N(3))-methyltransferase compare
ABI39_RS23155 +0.2 1.6 hypothetical protein compare
ABI39_RS08175 +0.2 0.8 anaerobic ribonucleoside-triphosphate reductase activating protein compare
ABI39_RS05420 +0.2 1.3 D-tyrosyl-tRNA(Tyr) deacylase compare
ABI39_RS16505 +0.2 1.9 HAD family phosphatase compare
ABI39_RS15110 +0.2 1.2 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG compare
ABI39_RS00345 +0.2 1.2 DUF1573 domain-containing protein compare
ABI39_RS01875 +0.2 1.4 Crp/Fnr family transcriptional regulator compare
ABI39_RS01440 +0.2 1.1 cytidylate kinase-like family protein compare
ABI39_RS21245 +0.2 1.3 hypothetical protein compare
ABI39_RS22930 +0.2 0.8 hypothetical protein compare
ABI39_RS07555 +0.2 1.4 hypothetical protein compare
ABI39_RS13010 +0.2 1.4 hypothetical protein compare
ABI39_RS02115 +0.2 1.5 response regulator compare
ABI39_RS09950 +0.2 1.9 AAA family ATPase compare
ABI39_RS13935 +0.2 1.5 TonB-dependent receptor compare
ABI39_RS14760 +0.2 1.4 glycosyltransferase family 2 protein compare
ABI39_RS16790 +0.2 1.6 GNAT family N-acetyltransferase compare
ABI39_RS08270 +0.2 1.3 AraC family transcriptional regulator compare
ABI39_RS08685 +0.2 0.8 hypothetical protein compare
ABI39_RS03885 +0.2 1.1 adenosine kinase compare
ABI39_RS17535 +0.2 1.3 YjbH domain-containing protein compare
ABI39_RS18870 +0.2 1.7 putative sulfate exporter family transporter compare
ABI39_RS03510 +0.2 1.1 ATP-binding protein compare
ABI39_RS16665 +0.2 1.2 flavodoxin FldA compare
ABI39_RS18635 +0.2 1.4 DUF4373 domain-containing protein compare
ABI39_RS12915 +0.2 1.4 DUF4136 domain-containing protein compare
ABI39_RS10410 +0.2 1.7 FAD-binding protein compare
ABI39_RS11170 +0.2 0.8 hypothetical protein compare
ABI39_RS12625 +0.2 1.7 hypothetical protein compare
ABI39_RS08595 +0.2 1.0 SGNH/GDSL hydrolase family protein compare
ABI39_RS06395 +0.2 1.6 hypothetical protein compare
ABI39_RS03435 +0.2 1.9 9-O-acetylesterase compare
ABI39_RS19955 +0.2 1.4 hypothetical protein compare
ABI39_RS14280 +0.2 0.6 P-II family nitrogen regulator compare
ABI39_RS15470 +0.2 1.4 TlpA family protein disulfide reductase compare
ABI39_RS19490 +0.2 1.0 hypothetical protein compare
ABI39_RS06780 +0.2 1.8 hypothetical protein compare
ABI39_RS17845 +0.2 1.7 AhpC/TSA family protein compare
ABI39_RS21450 +0.2 0.8 hypothetical protein compare
ABI39_RS15350 +0.2 1.3 LysO family transporter compare
ABI39_RS19595 +0.2 1.4 hypothetical protein compare
ABI39_RS10235 +0.2 1.4 DNA helicase RecQ compare
ABI39_RS13775 +0.2 1.1 UpxY family transcription antiterminator compare
ABI39_RS10830 +0.2 1.8 hypothetical protein compare
ABI39_RS09700 +0.2 1.1 M23 family metallopeptidase compare
ABI39_RS14445 +0.2 1.2 pyruvate formate lyase-activating protein compare


Specific Phenotypes

None in this experiment

For Phocaeicola dorei CL03T12C01 in carbon source experiments

For carbon source N-Acetyl-D-Glucosamine across organisms