Experiment set1S414 for Erwinia tracheiphila SCR3

Compare to:

Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2)

200 most important genes:

  gene name fitness t score description  
LU632_RS23980 tatC -8.6 -6.0 Sec-independent protein translocase subunit TatC compare
LU632_RS15245 purE -8.0 -2.8 5-(carboxyamino)imidazole ribonucleotide mutase compare
LU632_RS08790 -6.7 -4.6 EpsG family protein compare
LU632_RS21235 mlaD -6.7 -8.0 outer membrane lipid asymmetry maintenance protein MlaD compare
LU632_RS09955 pyrD -6.7 -4.6 quinone-dependent dihydroorotate dehydrogenase compare
LU632_RS08785 -6.6 -4.6 glycosyltransferase family 2 protein compare
LU632_RS21245 mlaF -6.6 -4.6 phospholipid ABC transporter ATP-binding protein MlaF compare
LU632_RS16115 sdhC -6.4 -6.4 succinate dehydrogenase cytochrome b556 subunit compare
LU632_RS08815 -6.3 -3.6 colanic acid biosynthesis glycosyltransferase WcaL compare
LU632_RS16110 sdhD -6.3 -8.7 succinate dehydrogenase membrane anchor subunit compare
LU632_RS07865 purF -6.1 -13.7 amidophosphoribosyltransferase compare
LU632_RS22140 glnL -6.1 -9.3 nitrogen regulation protein NR(II) compare
LU632_RS06615 ptsI -6.0 -10.0 phosphoenolpyruvate-protein phosphotransferase PtsI compare
LU632_RS08930 hisH -6.0 -4.1 imidazole glycerol phosphate synthase subunit HisH compare
LU632_RS20950 pyrB -6.0 -4.1 aspartate carbamoyltransferase compare
LU632_RS02750 carB -5.9 -4.1 carbamoyl-phosphate synthase large subunit compare
LU632_RS19585 sthA -5.9 -10.6 Si-specific NAD(P)(+) transhydrogenase compare
LU632_RS17975 purL -5.7 -6.8 phosphoribosylformylglycinamidine synthase compare
LU632_RS07995 nuoH -5.7 -3.5 NADH-quinone oxidoreductase subunit NuoH compare
LU632_RS16090 odhB -5.7 -2.6 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase compare
LU632_RS21755 -5.7 -15.6 adenylosuccinate synthase compare
LU632_RS15425 rpoE -5.7 -10.1 RNA polymerase sigma factor RpoE compare
LU632_RS08820 -5.6 -3.9 lipopolysaccharide biosynthesis protein compare
LU632_RS07775 aroC -5.6 -3.7 chorismate synthase compare
LU632_RS08780 wzc -5.5 -5.4 tyrosine-protein kinase Wzc compare
LU632_RS12500 pyrF -5.5 -5.4 orotidine-5'-phosphate decarboxylase compare
LU632_RS16100 -5.5 -5.7 succinate dehydrogenase iron-sulfur subunit compare
LU632_RS06610 crr -5.4 -2.8 PTS glucose transporter subunit IIA compare
LU632_RS08915 hisIE -5.4 -5.6 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
LU632_RS08945 hisD -5.4 -3.7 histidinol dehydrogenase compare
LU632_RS08950 hisG -5.4 -11.5 ATP phosphoribosyltransferase compare
LU632_RS10340 pyrC -5.4 -5.2 dihydroorotase compare
LU632_RS01015 purD -5.3 -5.2 phosphoribosylamine--glycine ligase compare
LU632_RS07985 nuoF -5.3 -7.3 NADH-quinone oxidoreductase subunit NuoF compare
LU632_RS08770 -5.3 -3.7 polysaccharide export protein compare
LU632_RS21225 mlaB -5.3 -5.6 lipid asymmetry maintenance protein MlaB compare
LU632_RS02875 leuB -5.2 -11.1 3-isopropylmalate dehydrogenase compare
LU632_RS08335 -5.2 -2.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
LU632_RS08940 hisC -5.2 -7.9 histidinol-phosphate transaminase compare
LU632_RS08275 purM -5.2 -5.0 phosphoribosylformylglycinamidine cyclo-ligase compare
LU632_RS24270 gppA -5.1 -2.1 guanosine-5'-triphosphate,3'-diphosphate diphosphatase compare
LU632_RS08935 hisB -5.1 -7.8 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
LU632_RS08925 hisA -5.1 -2.3 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
LU632_RS21240 mlaE -5.1 -5.3 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
LU632_RS22810 -5.1 -9.8 aspartate aminotransferase family protein compare
LU632_RS08800 -5.1 -2.2 glycosyltransferase compare
LU632_RS20900 argF -5.0 -12.0 ornithine carbamoyltransferase compare
LU632_RS20695 bacA -5.0 -4.9 undecaprenyl-diphosphate phosphatase compare
LU632_RS19615 argC -5.0 -10.1 N-acetyl-gamma-glutamyl-phosphate reductase compare
LU632_RS16105 sdhA -5.0 -10.6 succinate dehydrogenase flavoprotein subunit compare
LU632_RS14010 ldcA -4.9 -4.8 muramoyltetrapeptide carboxypeptidase compare
LU632_RS17615 -4.8 -3.5 YejL family protein compare
LU632_RS02870 leuC -4.8 -14.2 3-isopropylmalate dehydratase large subunit compare
LU632_RS15250 purK -4.8 -5.7 5-(carboxyamino)imidazole ribonucleotide synthase compare
LU632_RS08920 hisF -4.8 -6.5 imidazole glycerol phosphate synthase subunit HisF compare
LU632_RS02100 -4.8 -16.0 hemolysin family protein compare
LU632_RS16095 sucA -4.7 -3.3 2-oxoglutarate dehydrogenase E1 component compare
LU632_RS08805 -4.7 -15.4 phage tailspike protein compare
LU632_RS02755 carA -4.7 -10.3 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit compare
LU632_RS07300 mlaA -4.7 -9.7 phospholipid-binding lipoprotein MlaA compare
LU632_RS12910 -4.7 -3.0 NAD-dependent epimerase compare
LU632_RS18995 proC -4.6 -3.3 pyrroline-5-carboxylate reductase compare
LU632_RS22015 pyrE -4.6 -3.2 orotate phosphoribosyltransferase compare
LU632_RS08775 -4.6 -5.4 protein tyrosine phosphatase compare
LU632_RS07975 nuoC -4.6 -12.7 NADH-quinone oxidoreductase subunit C/D compare
LU632_RS08025 nuoN -4.6 -7.0 NADH-quinone oxidoreductase subunit NuoN compare
LU632_RS19610 argB -4.5 -3.4 acetylglutamate kinase compare
LU632_RS02865 leuD -4.5 -8.5 3-isopropylmalate dehydratase small subunit compare
LU632_RS19600 argH -4.5 -12.6 argininosuccinate lyase compare
LU632_RS21875 gpsA -4.4 -13.3 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
LU632_RS06210 argA -4.4 -6.8 amino-acid N-acetyltransferase compare
LU632_RS01020 purH -4.4 -3.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
LU632_RS21230 mlaC -4.4 -8.3 phospholipid-binding protein MlaC compare
LU632_RS19620 argE -4.2 -6.5 acetylornithine deacetylase compare
LU632_RS08020 nuoM -4.2 -9.0 NADH-quinone oxidoreductase subunit M compare
LU632_RS07970 -4.2 -10.6 NADH-quinone oxidoreductase subunit B compare
LU632_RS22960 feoA -4.2 -0.9 ferrous iron transporter A compare
LU632_RS09795 aroA -4.2 -13.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
LU632_RS02140 -4.2 -3.4 ribosome-associated protein compare
LU632_RS09245 -4.1 -6.4 L,D-transpeptidase family protein compare
LU632_RS06635 zipA -4.0 -3.7 cell division protein ZipA compare
LU632_RS08880 -4.0 -3.9 ABC transporter permease compare
LU632_RS02545 serB -4.0 -2.7 phosphoserine phosphatase compare
LU632_RS21085 secG -4.0 -2.9 preprotein translocase subunit SecG compare
LU632_RS12925 rssB -4.0 -1.8 two-component system response regulator RssB compare
LU632_RS02065 hflK -3.9 -2.3 FtsH protease activity modulator HflK compare
LU632_RS02085 cysQ -3.9 -1.4 3'(2'),5'-bisphosphate nucleotidase CysQ compare
LU632_RS03310 -3.9 -13.6 sucrose-6-phosphate hydrolase compare
LU632_RS10270 -3.9 -2.7 glucan biosynthesis protein G compare
LU632_RS02880 leuA -3.9 -14.0 2-isopropylmalate synthase compare
LU632_RS16415 tatE -3.9 -0.8 twin-arginine translocase subunit TatE compare
LU632_RS19605 -3.9 -9.0 argininosuccinate synthase compare
LU632_RS07965 -3.8 -7.8 NADH-quinone oxidoreductase subunit A compare
LU632_RS24885 pstC -3.8 -2.5 phosphate ABC transporter permease PstC compare
LU632_RS24405 -3.8 -12.6 branched-chain amino acid transaminase compare
LU632_RS07990 nuoG -3.8 -11.0 NADH-quinone oxidoreductase subunit NuoG compare
LU632_RS02070 hflC -3.8 -3.1 protease modulator HflC compare
LU632_RS08795 -3.8 -12.4 glycosyltransferase compare
LU632_RS08885 -3.8 -6.7 ABC transporter ATP-binding protein compare
LU632_RS08010 nuoK -3.8 -5.3 NADH-quinone oxidoreductase subunit NuoK compare
LU632_RS09745 -3.7 -1.5 DNA translocase FtsK 4TM domain-containing protein compare
LU632_RS24880 pstS -3.7 -5.3 phosphate ABC transporter substrate-binding protein PstS compare
LU632_RS09915 ompC -3.7 -5.6 porin OmpC compare
LU632_RS15445 tyrA -3.6 -12.3 bifunctional chorismate mutase/prephenate dehydrogenase compare
LU632_RS21955 -3.6 -1.7 glycosyltransferase family 4 protein compare
LU632_RS08000 nuoI -3.6 -5.8 NADH-quinone oxidoreductase subunit NuoI compare
LU632_RS08005 nuoJ -3.6 -7.9 NADH-quinone oxidoreductase subunit J compare
LU632_RS19780 -3.6 -12.6 amino acid ABC transporter permease compare
LU632_RS00135 -3.6 -1.0 YibL family ribosome-associated protein compare
LU632_RS08015 nuoL -3.5 -13.7 NADH-quinone oxidoreductase subunit L compare
LU632_RS05855 serA -3.5 -8.9 phosphoglycerate dehydrogenase compare
LU632_RS17820 ndk -3.5 -1.9 nucleoside-diphosphate kinase compare
LU632_RS19930 rseP -3.4 -5.8 sigma E protease regulator RseP compare
LU632_RS09475 mntR -3.4 -2.4 manganese-binding transcriptional regulator MntR compare
LU632_RS19785 -3.4 -10.1 amino acid ABC transporter ATP-binding protein compare
LU632_RS13085 dsbB -3.4 -5.9 disulfide bond formation protein DsbB compare
LU632_RS19770 -3.3 -8.0 amino acid ABC transporter substrate-binding protein compare
LU632_RS21445 mreC -3.3 -2.5 rod shape-determining protein MreC compare
LU632_RS22135 glnG -3.3 -6.8 nitrogen regulation protein NR(I) compare
LU632_RS06040 lysA -3.3 -7.7 diaminopimelate decarboxylase compare
LU632_RS22865 aroB -3.3 -3.7 3-dehydroquinate synthase compare
LU632_RS19775 -3.3 -13.4 amino acid ABC transporter permease compare
LU632_RS24840 kup -3.3 -10.8 low affinity potassium transporter Kup compare
LU632_RS20545 metC -3.3 -9.3 cystathionine beta-lyase compare
LU632_RS21880 secB -3.3 -4.4 protein-export chaperone SecB compare
LU632_RS20960 ridA -3.3 -3.1 2-iminobutanoate/2-iminopropanoate deaminase compare
LU632_RS05960 sdhE -3.3 -4.1 FAD assembly factor SdhE compare
LU632_RS12850 cls -3.2 -3.3 cardiolipin synthase compare
LU632_RS25725 -3.2 -2.6 ParA family protein compare
LU632_RS21360 degS -3.2 -11.4 outer membrane-stress sensor serine endopeptidase DegS compare
LU632_RS04250 yiaK -3.1 -4.6 3-dehydro-L-gulonate 2-dehydrogenase compare
LU632_RS10275 mdoH -3.1 -6.5 glucans biosynthesis glucosyltransferase MdoH compare
LU632_RS21365 mdh -3.0 -7.6 malate dehydrogenase compare
LU632_RS22935 envZ -3.0 -7.2 two-component system sensor histidine kinase EnvZ compare
LU632_RS19640 metB -3.0 -8.6 cystathionine gamma-synthase compare
LU632_RS02615 thrB -3.0 -5.0 homoserine kinase compare
LU632_RS05510 speA -3.0 -1.3 biosynthetic arginine decarboxylase compare
LU632_RS15385 rnc -2.9 -2.6 ribonuclease III compare
LU632_RS02910 rsmH -2.9 -6.9 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
LU632_RS08850 rfbB -2.9 -4.0 dTDP-glucose 4,6-dehydratase compare
LU632_RS22200 spoT -2.8 -2.5 bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase compare
LU632_RS22445 aroE -2.8 -3.9 shikimate dehydrogenase compare
LU632_RS06665 -2.8 -2.1 IS481 family transposase compare
LU632_RS12905 hns -2.8 -1.9 DNA-binding transcriptional regulator H-NS compare
LU632_RS22940 ompR -2.8 -5.4 two-component system response regulator OmpR compare
LU632_RS05390 -2.7 -15.6 ornithine decarboxylase compare
LU632_RS24250 wecA -2.7 -14.9 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
LU632_RS18585 -2.7 -1.5 DUF3251 domain-containing protein compare
LU632_RS01085 -2.6 -2.2 class I SAM-dependent methyltransferase compare
LU632_RS16480 -2.6 -6.8 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
LU632_RS21940 -2.6 -2.0 glycosyltransferase compare
LU632_RS12940 purU -2.5 -11.6 formyltetrahydrofolate deformylase compare
LU632_RS11470 asr -2.5 -3.0 acid resistance repetitive basic protein Asr compare
LU632_RS13340 -2.5 -1.8 hypothetical protein compare
LU632_RS24400 ilvD -2.5 -9.7 dihydroxy-acid dehydratase compare
LU632_RS24260 trxA -2.5 -3.5 thioredoxin TrxA compare
LU632_RS02590 gpmB -2.5 -3.2 2,3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB compare
LU632_RS04270 ulaD -2.5 -4.5 3-keto-L-gulonate-6-phosphate decarboxylase UlaD compare
LU632_RS09195 moaE -2.4 -0.8 molybdopterin synthase catalytic subunit MoaE compare
LU632_RS14710 -2.4 -1.3 antitermination protein compare
LU632_RS02610 thrA -2.4 -7.2 bifunctional aspartate kinase/homoserine dehydrogenase I compare
LU632_RS24890 pstA -2.4 -1.4 phosphate ABC transporter permease PstA compare
LU632_RS09700 clpS -2.4 -4.6 ATP-dependent Clp protease adapter ClpS compare
LU632_RS22410 metA -2.4 -9.6 homoserine O-succinyltransferase compare
LU632_RS02050 miaA -2.3 -3.9 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
LU632_RS08750 asmA -2.3 -8.6 outer membrane assembly protein AsmA compare
LU632_RS19075 -2.3 -1.9 transposase compare
LU632_RS04710 -2.3 -1.1 IS110 family transposase compare
LU632_RS19275 ftsE -2.2 -4.6 cell division ATP-binding protein FtsE compare
LU632_RS24205 rffM -2.2 -8.4 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
LU632_RS09705 clpA -2.2 -8.2 ATP-dependent Clp protease ATP-binding subunit ClpA compare
LU632_RS13950 ychF -2.2 -3.0 redox-regulated ATPase YchF compare
LU632_RS24170 hemX -2.1 -5.9 uroporphyrinogen-III C-methyltransferase compare
LU632_RS21345 -2.1 -9.2 cell division protein ZapE compare
LU632_RS26120 -2.1 -2.3 WGR domain-containing protein compare
LU632_RS18120 -2.1 -1.8 hypothetical protein compare
LU632_RS19270 ftsX -2.1 -9.2 permease-like cell division protein FtsX compare
LU632_RS21930 -2.1 -7.5 glycosyltransferase compare
LU632_RS10910 -2.1 -1.4 hypothetical protein compare
LU632_RS02210 yraP -2.1 -3.6 divisome-associated lipoprotein YraP compare
LU632_RS08190 apbE -2.0 -1.9 FAD:protein FMN transferase ApbE compare
LU632_RS18500 tgt -2.0 -3.5 tRNA guanosine(34) transglycosylase Tgt compare
LU632_RS22945 -2.0 -1.0 hypothetical protein compare
LU632_RS11560 pspA -2.0 -2.4 phage shock protein PspA compare
LU632_RS14835 plsX -2.0 -4.8 phosphate acyltransferase PlsX compare
LU632_RS06905 -2.0 -1.1 excisionase compare
LU632_RS04120 radC -2.0 -2.2 DNA repair protein RadC compare
LU632_RS14855 rluC -2.0 -4.4 23S rRNA pseudouridine(955/2504/2580) synthase RluC compare
LU632_RS23360 -2.0 -3.1 Sua5/YciO/YrdC/YwlC family protein compare
LU632_RS08035 -2.0 -8.9 glucan biosynthesis protein D compare
LU632_RS20805 -1.9 -1.1 AlpA family transcriptional regulator compare
LU632_RS07715 -1.9 -4.0 hypothetical protein compare
LU632_RS26015 -1.9 -3.7 hypothetical protein compare
LU632_RS15905 galT -1.9 -3.4 galactose-1-phosphate uridylyltransferase compare
LU632_RS24215 -1.9 -7.0 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
LU632_RS13170 -1.9 -0.9 YoaH family protein compare
LU632_RS17785 bamB -1.9 -4.3 outer membrane protein assembly factor BamB compare
LU632_RS18420 -1.9 -0.9 LysE family translocator compare
LU632_RS13460 cmoB -1.9 -6.0 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB compare
LU632_RS15765 -1.8 -0.7 IS481 family transposase compare


Specific Phenotypes

For 1 genes in this experiment