Experiment set1S410 for Phocaeicola dorei CL03T12C01

Compare to:

D-Glucose carbon source

200 most detrimental genes:

  gene name fitness t score description  
ABI39_RS01900 +3.5 27.1 4Fe-4S dicluster domain-containing protein compare
ABI39_RS01910 +3.4 28.5 [FeFe] hydrogenase H-cluster radical SAM maturase HydG compare
ABI39_RS01915 +3.3 27.2 [FeFe] hydrogenase H-cluster maturation GTPase HydF compare
ABI39_RS15400 +3.3 24.6 TraR/DksA C4-type zinc finger protein compare
ABI39_RS01905 +3.2 16.9 [FeFe] hydrogenase H-cluster radical SAM maturase HydE compare
ABI39_RS02745 +2.6 19.8 DUF59 domain-containing protein compare
ABI39_RS12425 +1.9 17.3 acyl-CoA carboxylase subunit beta compare
ABI39_RS12420 +1.9 14.1 OadG family protein compare
ABI39_RS12415 +1.8 10.2 biotin/lipoyl-binding protein compare
ABI39_RS14480 +1.6 13.2 ferrous iron transport protein B compare
ABI39_RS08555 +1.6 10.9 Trk system potassium transporter TrkA compare
ABI39_RS17335 +1.6 12.8 phosphatidylinositol-4-phosphate 5-kinase compare
ABI39_RS12450 +1.5 7.0 Rossmann-like and DUF2520 domain-containing protein compare
ABI39_RS09900 +1.3 8.7 Lrp/AsnC ligand binding domain-containing protein compare
ABI39_RS04200 +1.3 7.5 Na/Pi cotransporter family protein compare
ABI39_RS13835 +1.3 5.9 DUF3037 domain-containing protein compare
ABI39_RS12430 +1.2 2.7 methylmalonyl-CoA epimerase compare
ABI39_RS01735 +1.1 7.9 acyl-CoA dehydrogenase family protein compare
ABI39_RS01650 +1.1 5.4 methylmalonyl-CoA mutase small subunit compare
ABI39_RS18355 +1.0 8.8 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
ABI39_RS01655 +1.0 7.1 methylmalonyl-CoA mutase compare
ABI39_RS01730 +1.0 7.8 electron transfer flavoprotein subunit alpha/FixB family protein compare
ABI39_RS20975 +1.0 2.7 phage holin family protein compare
ABI39_RS09515 +1.0 4.9 nucleoside deaminase compare
ABI39_RS19995 +1.0 2.5 DUF4494 domain-containing protein compare
ABI39_RS05655 +1.0 1.9 hypothetical protein compare
ABI39_RS15420 +0.9 4.3 RNA methyltransferase compare
ABI39_RS17245 +0.9 3.5 tRNA (guanosine(37)-N1)-methyltransferase TrmD compare
ABI39_RS11650 +0.9 6.2 galactokinase compare
ABI39_RS13855 +0.9 5.7 response regulator transcription factor compare
ABI39_RS02460 +0.9 4.1 peptidoglycan DD-metalloendopeptidase family protein compare
ABI39_RS02105 +0.9 6.6 insulinase family protein compare
ABI39_RS12705 +0.9 4.7 FKBP-type peptidyl-prolyl cis-trans isomerase compare
ABI39_RS11550 +0.9 6.9 hypothetical protein compare
ABI39_RS03885 +0.9 3.7 adenosine kinase compare
ABI39_RS17340 +0.9 5.8 insulinase family protein compare
ABI39_RS00250 +0.8 3.2 chloride channel protein compare
ABI39_RS09685 +0.8 2.6 hypothetical protein compare
ABI39_RS10085 +0.8 3.3 enoyl-ACP reductase compare
ABI39_RS00780 +0.8 3.5 serine hydrolase compare
ABI39_RS12145 +0.8 3.9 isochorismate synthase compare
ABI39_RS19750 +0.8 2.0 tRNA-Tyr compare
ABI39_RS00755 +0.8 5.2 hypothetical protein compare
ABI39_RS04730 +0.8 1.4 Lrp/AsnC ligand binding domain-containing protein compare
ABI39_RS07445 +0.8 4.5 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
ABI39_RS05615 +0.8 6.0 tRNA pseudouridine(55) synthase TruB compare
ABI39_RS01725 +0.8 3.7 electron transfer flavoprotein subunit beta/FixA family protein compare
ABI39_RS10360 +0.8 3.6 homoserine O-succinyltransferase compare
ABI39_RS15665 +0.7 4.8 pyridoxal phosphate-dependent class II aminotransferase compare
ABI39_RS08125 +0.7 3.7 hypothetical protein compare
ABI39_RS02845 +0.7 4.5 RluA family pseudouridine synthase compare
ABI39_RS00040 +0.7 3.3 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB compare
ABI39_RS04675 +0.7 1.8 hypothetical protein compare
ABI39_RS11485 +0.7 3.0 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
ABI39_RS12410 +0.7 5.5 sodium ion-translocating decarboxylase subunit beta compare
ABI39_RS09715 +0.7 5.0 lytic transglycosylase domain-containing protein compare
ABI39_RS12140 +0.7 5.3 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase compare
ABI39_RS12800 +0.7 5.4 hypothetical protein compare
ABI39_RS14060 +0.7 1.4 hypothetical protein compare
ABI39_RS20215 +0.7 1.3 DUF4248 domain-containing protein compare
ABI39_RS12690 +0.7 4.2 tRNA pseudouridine(38-40) synthase TruA compare
ABI39_RS15495 +0.7 4.7 ABC transporter substrate-binding protein compare
ABI39_RS11350 +0.7 2.8 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
ABI39_RS04435 +0.7 5.9 glycoside hydrolase family 97 protein compare
ABI39_RS15380 +0.6 1.7 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
ABI39_RS14890 +0.6 1.2 tRNA-Asp compare
ABI39_RS16360 +0.6 3.6 hypothetical protein compare
ABI39_RS14875 +0.6 2.6 hypothetical protein compare
ABI39_RS16445 +0.6 2.4 alpha-ribazole phosphatase compare
ABI39_RS12915 +0.6 2.9 DUF4136 domain-containing protein compare
ABI39_RS06220 +0.6 5.5 glycosyltransferase family 2 protein compare
ABI39_RS19745 +0.6 2.1 hypothetical protein compare
ABI39_RS11565 +0.6 4.2 Gfo/Idh/MocA family oxidoreductase compare
ABI39_RS18350 +0.6 2.2 GAF domain-containing protein compare
ABI39_RS00985 +0.6 4.1 glycoside hydrolase family 88 protein compare
ABI39_RS10370 +0.6 4.7 hypothetical protein compare
ABI39_RS14510 +0.6 1.7 3'-5' exonuclease compare
ABI39_RS20180 +0.6 1.9 antitoxin HicB compare
ABI39_RS05405 +0.6 3.8 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
ABI39_RS16695 +0.6 3.6 carbon-nitrogen hydrolase compare
ABI39_RS20335 +0.6 1.3 hypothetical protein compare
ABI39_RS13500 +0.6 4.0 transporter compare
ABI39_RS09825 +0.6 4.2 DUF1573 domain-containing protein compare
ABI39_RS04135 +0.6 4.9 mannose-1-phosphate guanylyltransferase compare
ABI39_RS09830 +0.6 3.5 methylmalonyl Co-A mutase-associated GTPase MeaB compare
ABI39_RS01085 +0.6 3.9 iron-containing alcohol dehydrogenase compare
ABI39_RS09150 +0.5 2.6 cupin domain-containing protein compare
ABI39_RS06725 +0.5 1.5 hypothetical protein compare
ABI39_RS19630 +0.5 1.7 hypothetical protein compare
ABI39_RS19760 +0.5 1.4 tRNA-Gln compare
ABI39_RS19105 +0.5 1.6 aldo/keto reductase compare
ABI39_RS14910 +0.5 3.2 hydroxylamine reductase compare
ABI39_RS04890 +0.5 2.3 HAD family phosphatase compare
ABI39_RS00210 +0.5 2.3 DUF4827 domain-containing protein compare
ABI39_RS14035 +0.5 2.2 energy-dependent translational throttle protein EttA compare
ABI39_RS15010 +0.5 1.4 F0F1 ATP synthase subunit gamma compare
ABI39_RS03510 +0.5 1.9 ATP-binding protein compare
ABI39_RS10365 +0.5 3.8 U32 family peptidase compare
ABI39_RS14415 +0.5 2.2 hemerythrin domain-containing protein compare
ABI39_RS15625 +0.5 1.8 anaerobic ribonucleoside-triphosphate reductase activating protein compare
ABI39_RS16455 +0.5 3.3 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ABI39_RS14465 +0.5 3.9 hypothetical protein compare
ABI39_RS06450 +0.5 2.0 hydroxymyristoyl-ACP dehydratase compare
ABI39_RS22825 +0.5 1.1 hypothetical protein compare
ABI39_RS13850 +0.5 3.7 DUF5113 domain-containing protein compare
ABI39_RS21935 +0.5 2.8 DUF1573 domain-containing protein compare
ABI39_RS15110 +0.5 2.7 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG compare
ABI39_RS19435 +0.5 1.9 hypothetical protein compare
ABI39_RS11815 +0.5 2.3 uridine kinase compare
ABI39_RS16450 +0.5 3.2 adenosylcobinamide-GDP ribazoletransferase compare
ABI39_RS15510 +0.5 2.3 cobalt-precorrin-5B (C(1))-methyltransferase compare
ABI39_RS15945 +0.5 1.3 hypothetical protein compare
ABI39_RS04595 +0.5 1.5 CvpA family protein compare
ABI39_RS15845 +0.5 1.6 hypothetical protein compare
ABI39_RS23215 +0.5 1.8 aldo/keto reductase compare
ABI39_RS08480 +0.5 0.9 histidine kinase compare
ABI39_RS15525 +0.5 3.5 precorrin-3B C(17)-methyltransferase compare
ABI39_RS23050 +0.5 1.4 hypothetical protein compare
ABI39_RS15640 +0.5 4.0 TonB-dependent receptor compare
ABI39_RS18580 +0.5 1.8 ATP-binding protein compare
ABI39_RS02225 +0.5 4.2 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit compare
ABI39_RS15660 +0.5 3.7 cobyric acid synthase compare
ABI39_RS12165 +0.5 2.5 FAD-dependent oxidoreductase compare
ABI39_RS05455 +0.5 2.5 ketopantoate reductase family protein compare
ABI39_RS17820 +0.5 3.1 polyamine ABC transporter ATP-binding protein compare
ABI39_RS09775 +0.5 3.2 magnesium transporter compare
ABI39_RS15635 +0.5 3.5 TonB-dependent receptor compare
ABI39_RS11545 +0.5 2.9 hypothetical protein compare
ABI39_RS07340 +0.4 1.2 hypothetical protein compare
ABI39_RS17645 +0.4 1.3 TIGR03905 family TSCPD domain-containing protein compare
ABI39_RS17370 +0.4 2.4 ABC transporter ATP-binding protein compare
ABI39_RS14835 +0.4 1.1 DNA-binding protein compare
ABI39_RS15500 +0.4 2.7 iron ABC transporter permease compare
ABI39_RS18615 +0.4 1.5 hypothetical protein compare
ABI39_RS03435 +0.4 3.5 9-O-acetylesterase compare
ABI39_RS12515 +0.4 1.4 hypothetical protein compare
ABI39_RS08795 +0.4 1.2 DUF4134 domain-containing protein compare
ABI39_RS08810 +0.4 1.0 DUF3876 domain-containing protein compare
ABI39_RS02200 +0.4 2.3 tRNA-Val compare
ABI39_RS15505 +0.4 2.3 ABC transporter ATP-binding protein compare
ABI39_RS14680 +0.4 2.2 methylcobamide--CoM methyltransferase compare
ABI39_RS01280 +0.4 2.4 efflux transporter outer membrane subunit compare
ABI39_RS15515 +0.4 3.3 precorrin-4 C(11)-methyltransferase compare
ABI39_RS13270 +0.4 3.1 mannose-1-phosphate guanylyltransferase compare
ABI39_RS18345 +0.4 2.0 nucleoside phosphorylase compare
ABI39_RS03210 +0.4 2.7 helix-turn-helix domain-containing protein compare
ABI39_RS09920 +0.4 3.4 sigma-70 family RNA polymerase sigma factor compare
ABI39_RS15670 +0.4 3.3 cobalamin biosynthesis protein CobD compare
ABI39_RS07330 +0.4 1.7 winged helix-turn-helix transcriptional regulator compare
ABI39_RS02290 +0.4 1.8 hypothetical protein compare
ABI39_RS17355 +0.4 1.7 TetR/AcrR family transcriptional regulator compare
ABI39_RS18775 +0.4 3.4 WG repeat-containing protein compare
ABI39_RS05925 +0.4 3.4 glycoside hydrolase family 127 protein compare
ABI39_RS16665 +0.4 1.7 flavodoxin FldA compare
ABI39_RS10415 +0.4 1.3 DUF1847 domain-containing protein compare
ABI39_RS18895 +0.4 1.6 DUF5606 domain-containing protein compare
ABI39_RS12150 +0.4 1.8 hotdog fold thioesterase compare
ABI39_RS19565 +0.4 2.2 hypothetical protein compare
ABI39_RS18550 +0.4 1.4 hypothetical protein compare
ABI39_RS11600 +0.4 2.4 tetratricopeptide repeat protein compare
ABI39_RS08205 +0.4 2.6 diaminopimelate dehydrogenase compare
ABI39_RS10480 +0.4 2.5 alpha/beta hydrolase compare
ABI39_RS00555 +0.4 1.5 BlaI/MecI/CopY family transcriptional regulator compare
ABI39_RS16460 +0.4 2.7 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
ABI39_RS18610 +0.4 1.2 IS66 family insertion sequence element accessory protein TnpB compare
ABI39_RS17195 +0.4 2.9 hypothetical protein compare
ABI39_RS15630 +0.4 2.9 sirohydrochlorin cobaltochelatase compare
ABI39_RS01840 +0.4 2.5 hypothetical protein compare
ABI39_RS19425 +0.4 2.1 hypothetical protein compare
ABI39_RS15650 +0.4 2.9 cobyrinate a,c-diamide synthase compare
ABI39_RS16725 +0.4 2.4 hypothetical protein compare
ABI39_RS01375 +0.4 2.0 ABC transporter permease compare
ABI39_RS02100 +0.4 2.3 peptidylprolyl isomerase compare
ABI39_RS14880 +0.4 1.4 GNAT family N-acetyltransferase compare
ABI39_RS17610 +0.4 1.3 sensor histidine kinase compare
ABI39_RS14650 +0.4 1.2 hypothetical protein compare
ABI39_RS08820 +0.4 1.2 conjugative transposon protein TraJ compare
ABI39_RS01985 +0.4 2.8 transketolase compare
ABI39_RS21910 +0.4 1.9 hypothetical protein compare
ABI39_RS20150 +0.4 1.3 Fic family protein compare
ABI39_RS14410 +0.4 2.3 tryptophan-rich sensory protein compare
ABI39_RS18215 +0.4 2.5 class I SAM-dependent rRNA methyltransferase compare
ABI39_RS12685 +0.4 2.4 hypothetical protein compare
ABI39_RS15765 +0.4 0.7 hypothetical protein compare
ABI39_RS12120 +0.4 2.9 AMP-binding protein compare
ABI39_RS11885 +0.4 3.0 aminoacyl-histidine dipeptidase compare
ABI39_RS19940 +0.4 1.8 ATP-binding cassette domain-containing protein compare
ABI39_RS06235 +0.4 2.1 UDP-galactopyranose mutase compare
ABI39_RS11400 +0.4 3.2 aspartate-alanine antiporter compare
ABI39_RS01345 +0.4 2.6 ParB-like nuclease domain-containing protein compare
ABI39_RS16400 +0.4 1.5 hypothetical protein compare
ABI39_RS13925 +0.4 2.7 bifunctional metallophosphatase/5'-nucleotidase compare
ABI39_RS05640 +0.4 2.1 PspC domain-containing protein compare
ABI39_RS20500 +0.4 1.4 acyltransferase compare
ABI39_RS01990 +0.4 2.2 transketolase compare
ABI39_RS06695 +0.4 2.7 translational GTPase TypA compare
ABI39_RS11865 +0.4 1.9 thioredoxin compare
ABI39_RS15100 +0.4 3.1 aminomethyl-transferring glycine dehydrogenase compare
ABI39_RS15075 +0.4 1.1 hypothetical protein compare
ABI39_RS20590 +0.4 2.7 response regulator compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source D-Glucose in Phocaeicola dorei CL03T12C01

For carbon source D-Glucose across organisms