Experiment set1S41 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

200 most important genes:

  gene name fitness t score description  
MPMX19_03906 -2.5 -14.4 Pca regulon regulatory protein compare
MPMX19_00126 -2.1 -3.9 hypothetical protein compare
MPMX19_00976 -2.0 -2.9 ATP-dependent RNA helicase RhlE compare
MPMX19_00128 -1.8 -11.3 hypothetical protein compare
MPMX19_01955 -1.8 -2.0 Putative anti-sigma factor antagonist compare
MPMX19_01243 -1.8 -2.5 hypothetical protein compare
MPMX19_01054 -1.7 -5.8 Aspartate carbamoyltransferase compare
MPMX19_04835 -1.6 -2.9 hypothetical protein compare
MPMX19_02657 -1.6 -12.8 Glutamate synthase [NADPH] large chain compare
MPMX19_03787 -1.6 -2.2 hypothetical protein compare
MPMX19_01630 -1.5 -4.0 Phosphoribosylamine--glycine ligase compare
MPMX19_02268 -1.5 -3.4 hypothetical protein compare
MPMX19_02658 -1.4 -9.2 Glutamate synthase [NADPH] small chain compare
MPMX19_06985 -1.4 -2.2 L-malyl-CoA/beta-methylmalyl-CoA lyase compare
MPMX19_01053 -1.4 -3.7 Dihydroorotase compare
MPMX19_04952 -1.4 -2.3 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_05818 -1.4 -1.8 hypothetical protein compare
MPMX19_04171 -1.3 -1.9 16S ribosomal RNA compare
MPMX19_00530 -1.3 -2.9 Orotate phosphoribosyltransferase compare
MPMX19_01560 -1.3 -2.8 3'-5' exonuclease DinG compare
MPMX19_01076 -1.3 -1.7 Molybdopterin synthase catalytic subunit compare
MPMX19_03213 -1.3 -3.4 hypothetical protein compare
MPMX19_00139 -1.3 -3.8 hypothetical protein compare
MPMX19_00262 -1.3 -2.0 Thiazole synthase compare
MPMX19_00841 -1.3 -2.0 Holo-[acyl-carrier-protein] synthase compare
MPMX19_04869 -1.3 -4.1 DNA polymerase I compare
MPMX19_06373 -1.3 -2.4 Lipoprotein signal peptidase compare
MPMX19_00705 -1.2 -2.9 Cell division coordinator CpoB compare
MPMX19_01247 -1.2 -1.3 Transcriptional regulatory protein DegU compare
MPMX19_02303 -1.2 -2.4 hypothetical protein compare
MPMX19_04115 -1.2 -1.9 Sensor histidine kinase RcsC compare
MPMX19_06804 -1.2 -1.3 hypothetical protein compare
MPMX19_03609 -1.2 -2.7 HTH-type transcriptional repressor NagR compare
MPMX19_02267 -1.2 -1.5 hypothetical protein compare
MPMX19_06141 -1.2 -3.2 Intermembrane phospholipid transport system permease protein MlaE compare
MPMX19_00237 -1.1 -3.2 Cysteine synthase compare
MPMX19_03298 -1.1 -2.2 hypothetical protein compare
MPMX19_01125 -1.1 -1.7 hypothetical protein compare
MPMX19_02646 -1.1 -2.5 hypothetical protein compare
MPMX19_00236 -1.1 -2.5 HTH-type transcriptional regulator IscR compare
MPMX19_00181 -1.1 -3.7 hypothetical protein compare
MPMX19_00838 -1.1 -2.4 GTP pyrophosphokinase rsh compare
MPMX19_01304 -1.1 -6.3 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_00714 -1.1 -4.5 Ferrous-iron efflux pump FieF compare
MPMX19_01394 -1.1 -1.7 hypothetical protein compare
MPMX19_00304 -1.1 -2.5 Phosphatidylcholine synthase compare
MPMX19_01400 -1.0 -2.0 hypothetical protein compare
MPMX19_00170 -1.0 -2.1 hypothetical protein compare
MPMX19_04615 -1.0 -2.0 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_05217 -1.0 -1.1 Flagellin compare
MPMX19_05314 -1.0 -2.1 hypothetical protein compare
MPMX19_04861 -1.0 -2.4 hypothetical protein compare
MPMX19_02084 -1.0 -1.6 hypothetical protein compare
MPMX19_01998 -1.0 -3.8 3-isopropylmalate dehydratase large subunit compare
MPMX19_04903 -1.0 -3.4 hypothetical protein compare
MPMX19_02737 -1.0 -4.5 Tryptophan synthase alpha chain compare
MPMX19_01883 -1.0 -4.9 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_05358 -1.0 -1.0 hypothetical protein compare
MPMX19_05144 -1.0 -2.1 hypothetical protein compare
MPMX19_05834 -1.0 -1.9 Hydrogen peroxide-inducible genes activator compare
MPMX19_03184 -0.9 -2.3 hypothetical protein compare
MPMX19_04617 -0.9 -3.3 High-affinity branched-chain amino acid transport system permease protein LivH compare
MPMX19_00794 -0.9 -2.3 Transcriptional activator protein CopR compare
MPMX19_02981 -0.9 -3.2 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_06327 -0.9 -1.6 hypothetical protein compare
MPMX19_03771 -0.9 -2.5 hypothetical protein compare
MPMX19_05982 -0.9 -2.2 hypothetical protein compare
MPMX19_01748 -0.9 -1.7 hypothetical protein compare
MPMX19_03470 -0.9 -2.5 Phosphatidylinositol phosphate synthase compare
MPMX19_00148 -0.9 -2.0 hypothetical protein compare
MPMX19_03448 -0.9 -2.3 hypothetical protein compare
MPMX19_00066 -0.9 -1.6 hypothetical protein compare
MPMX19_06267 -0.9 -2.1 hypothetical protein compare
MPMX19_05355 -0.9 -2.2 Transcriptional regulator SlyA compare
MPMX19_02675 -0.9 -6.3 Phosphoenolpyruvate-dependent phosphotransferase system compare
MPMX19_05850 -0.8 -1.6 hypothetical protein compare
MPMX19_05719 -0.8 -1.6 hypothetical protein compare
MPMX19_03722 -0.8 -1.5 hypothetical protein compare
MPMX19_00432 -0.8 -2.8 hypothetical protein compare
MPMX19_01822 -0.8 -3.8 2-isopropylmalate synthase compare
MPMX19_01014 -0.8 -3.3 Indole-3-glycerol phosphate synthase compare
MPMX19_06508 -0.8 -1.8 Nitrilotriacetate monooxygenase component A compare
MPMX19_00240 -0.8 -1.7 hypothetical protein compare
MPMX19_00906 -0.8 -5.5 Amidophosphoribosyltransferase compare
MPMX19_01190 -0.8 -1.9 Response regulator receiver protein CpdR compare
MPMX19_02607 -0.8 -2.6 hypothetical protein compare
MPMX19_05680 -0.8 -2.6 Cell cycle response regulator CtrA compare
MPMX19_03252 -0.8 -2.5 hypothetical protein compare
MPMX19_04512 -0.8 -2.9 C4-dicarboxylate transport transcriptional regulatory protein DctD compare
MPMX19_03196 -0.8 -1.8 hypothetical protein compare
MPMX19_05203 -0.8 -1.4 hypothetical protein compare
MPMX19_02979 -0.8 -2.3 Hydrogen cyanide synthase subunit HcnB compare
MPMX19_02248 -0.8 -2.3 hypothetical protein compare
MPMX19_05997 -0.8 -1.9 hypothetical protein compare
MPMX19_01423 -0.7 -1.9 hypothetical protein compare
MPMX19_00609 -0.7 -2.0 Chemotaxis protein CheY compare
MPMX19_05445 -0.7 -2.0 tRNA-Glu compare
MPMX19_01395 -0.7 -1.6 hypothetical protein compare
MPMX19_05387 -0.7 -1.7 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
MPMX19_02736 -0.7 -4.7 Tryptophan synthase beta chain compare
MPMX19_05464 -0.7 -4.1 hypothetical protein compare
MPMX19_06387 -0.7 -2.6 hypothetical protein compare
MPMX19_00633 -0.7 -3.5 Intermembrane phospholipid transport system lipoprotein MlaA compare
MPMX19_02674 -0.7 -1.3 NADH:quinone reductase compare
MPMX19_00150 -0.7 -2.7 hypothetical protein compare
MPMX19_06297 -0.7 -0.9 hypothetical protein compare
MPMX19_05936 -0.7 -2.5 Alpha-galactosidase compare
MPMX19_04996 -0.7 -1.5 hypothetical protein compare
MPMX19_06926 -0.7 -1.9 hypothetical protein compare
MPMX19_03096 -0.7 -1.1 hypothetical protein compare
MPMX19_04958 -0.7 -1.3 Methyl-accepting chemotaxis protein compare
MPMX19_05601 -0.7 -2.0 putative ABC transporter ATP-binding protein YejF compare
MPMX19_02011 -0.7 -2.0 RNA helicase CrhR compare
MPMX19_01314 -0.7 -3.3 hypothetical protein compare
MPMX19_06123 -0.7 -1.3 hypothetical protein compare
MPMX19_04535 -0.7 -1.4 Maleate isomerase compare
MPMX19_02937 -0.7 -0.9 hypothetical protein compare
MPMX19_05100 -0.7 -1.4 hypothetical protein compare
MPMX19_03197 -0.7 -1.8 hypothetical protein compare
MPMX19_06179 -0.7 -1.3 putative SURF1-like protein compare
MPMX19_00015 -0.7 -1.3 hypothetical protein compare
MPMX19_00472 -0.7 -1.4 Protein HesB, heterocyst compare
MPMX19_01545 -0.7 -1.1 Lon protease compare
MPMX19_05193 -0.7 -1.3 Taurine-binding periplasmic protein compare
MPMX19_03198 -0.7 -1.9 hypothetical protein compare
MPMX19_00478 -0.7 -1.0 putative protein RP812 compare
MPMX19_02553 -0.7 -2.6 Protein-export protein SecB compare
MPMX19_05458 -0.7 -2.0 hypothetical protein compare
MPMX19_01884 -0.7 -1.2 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_06790 -0.7 -1.8 D-amino acid dehydrogenase compare
MPMX19_06789 -0.7 -1.2 Octopine catabolism/uptake operon regulatory protein OccR compare
MPMX19_02654 -0.6 -1.9 hypothetical protein compare
MPMX19_05143 -0.6 -1.2 hypothetical protein compare
MPMX19_05070 -0.6 -2.6 hypothetical protein compare
MPMX19_04563 -0.6 -1.2 hypothetical protein compare
MPMX19_03870 -0.6 -1.2 L-aspartate dehydrogenase compare
MPMX19_02714 -0.6 -1.4 hypothetical protein compare
MPMX19_04391 -0.6 -3.6 Homoserine O-acetyltransferase compare
MPMX19_05727 -0.6 -3.3 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_01652 -0.6 -1.9 hypothetical protein compare
MPMX19_05469 -0.6 -2.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_06009 -0.6 -1.6 hypothetical protein compare
MPMX19_00712 -0.6 -3.1 hypothetical protein compare
MPMX19_04913 -0.6 -1.0 hypothetical protein compare
MPMX19_06001 -0.6 -2.0 hypothetical protein compare
MPMX19_03194 -0.6 -1.3 hypothetical protein compare
MPMX19_01834 -0.6 -1.4 hypothetical protein compare
MPMX19_01342 -0.6 -1.2 hypothetical protein compare
MPMX19_06004 -0.6 -1.6 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_04683 -0.6 -1.4 Acylamidase compare
MPMX19_06777 -0.6 -1.3 hypothetical protein compare
MPMX19_01585 -0.6 -1.6 Zinc uptake regulation protein compare
MPMX19_06723 -0.6 -2.0 hypothetical protein compare
MPMX19_00694 -0.6 -1.5 2',3'-cyclic-nucleotide 2'-phosphodiesterase compare
MPMX19_06796 -0.6 -2.9 2-oxo-hept-4-ene-1,7-dioate hydratase compare
MPMX19_02516 -0.6 -2.2 hypothetical protein compare
MPMX19_06849 -0.6 -2.8 Glutarate-semialdehyde dehydrogenase compare
MPMX19_03557 -0.6 -2.0 HTH-type transcriptional regulator CynR compare
MPMX19_02999 -0.6 -1.5 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_06020 -0.6 -2.6 hypothetical protein compare
MPMX19_06111 -0.6 -1.9 Non-motile and phage-resistance protein compare
MPMX19_01877 -0.6 -2.2 hypothetical protein compare
MPMX19_05606 -0.6 -1.3 hypothetical protein compare
MPMX19_01015 -0.6 -2.5 Anthranilate phosphoribosyltransferase compare
MPMX19_01720 -0.6 -2.0 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB compare
MPMX19_05442 -0.6 -1.5 Ribosomal large subunit pseudouridine synthase D compare
MPMX19_04948 -0.6 -1.2 HTH-type transcriptional regulator GltR compare
MPMX19_06526 -0.6 -1.6 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_04681 -0.6 -1.6 5-hydroxyisourate hydrolase compare
MPMX19_05034 -0.6 -1.4 ATP synthase subunit c compare
MPMX19_05389 -0.6 -1.8 Pyruvate kinase compare
MPMX19_04560 -0.6 -1.6 hypothetical protein compare
MPMX19_02392 -0.6 -4.8 Aspartate/prephenate aminotransferase compare
MPMX19_03584 -0.6 -2.1 Adaptive-response sensory-kinase SasA compare
MPMX19_06014 -0.6 -3.2 Histidinol-phosphate aminotransferase compare
MPMX19_01995 -0.6 -2.2 hypothetical protein compare
MPMX19_02803 -0.6 -1.7 putative FAD-linked oxidoreductase compare
MPMX19_06028 -0.6 -1.8 hypothetical protein compare
MPMX19_05119 -0.6 -4.0 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_00923 -0.6 -1.7 hypothetical protein compare
MPMX19_04730 -0.6 -2.2 Transcription elongation factor GreB compare
MPMX19_03481 -0.6 -2.6 hypothetical protein compare
MPMX19_06309 -0.6 -1.9 hypothetical protein compare
MPMX19_01714 -0.6 -1.0 tRNA-modifying protein YgfZ compare
MPMX19_04701 -0.6 -1.0 Transcriptional regulatory protein FixJ compare
MPMX19_00839 -0.6 -1.2 hypothetical protein compare
MPMX19_06050 -0.6 -4.8 Phosphoenolpyruvate carboxylase compare
MPMX19_01085 -0.6 -2.4 hypothetical protein compare
MPMX19_03165 -0.6 -1.3 hypothetical protein compare
MPMX19_04951 -0.6 -3.5 hypothetical protein compare
MPMX19_05473 -0.6 -1.8 hypothetical protein compare
MPMX19_02759 -0.6 -2.1 Xanthine phosphoribosyltransferase compare
MPMX19_02902 -0.6 -1.2 hypothetical protein compare
MPMX19_05599 -0.5 -1.7 hypothetical protein compare
MPMX19_02988 -0.5 -1.8 hypothetical protein compare
MPMX19_00675 -0.5 -1.1 Peptidoglycan-associated lipoprotein compare
MPMX19_01111 -0.5 -1.3 Sensory histidine kinase/phosphatase NtrB compare
MPMX19_01084 -0.5 -2.2 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_03141 -0.5 -1.1 hypothetical protein compare
MPMX19_04568 -0.5 -1.6 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in mixed community experiments

For mixed community Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum across organisms