Experiment set1S409 for Escherichia coli ECOR38
Bas48
Group: phageMedia: LB_plus_SM_buffer + MOI 10
Culturing: Ecoli_ECOR38_ML2, 48 well microplate, Aerobic, at 37 (C), shaken=double orbital, continuous, 205cpm
By: Lucas on 11/24/2024
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride, 100 mM Sodium Chloride, 4 mM Magnesium sulfate, 0.005 vol% Gelatin, 25 mM Tris hydrochloride
Specific Phenotypes
For 2 genes in this experiment
For phage MOI 10 in Escherichia coli ECOR38
For phage MOI 10 across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Experimental tye | 1 |
| Heme and Siroheme Biosynthesis | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| heme b biosynthesis II (oxygen-independent) | 4 | 4 | 1 |
| superpathway of heme b biosynthesis from uroporphyrinogen-III | 6 | 6 | 1 |
| 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic) | 9 | 3 | 1 |
| superpathway of bacteriochlorophyll a biosynthesis | 26 | 6 | 1 |