Experiment set1S409 for Phocaeicola dorei CL03T12C01

Compare to:

D-Glucose carbon source

200 most important genes:

  gene name fitness t score description  
ABI39_RS14225 -9.0 -6.2 glycosyltransferase compare
ABI39_RS07005 -8.1 -5.6 type II 3-dehydroquinate dehydratase compare
ABI39_RS02980 -8.0 -11.0 N-acetyltransferase compare
ABI39_RS21075 -8.0 -7.8 tryptophan synthase subunit alpha compare
ABI39_RS02960 -7.7 -13.8 pyrroline-5-carboxylate reductase compare
ABI39_RS04695 -7.6 -7.4 shikimate kinase compare
ABI39_RS14230 -7.5 -13.4 alpha-amylase compare
ABI39_RS06055 -7.1 -8.5 phosphoribosylamine--glycine ligase compare
ABI39_RS12645 -7.1 -14.4 chorismate synthase compare
ABI39_RS07095 -7.1 -21.7 argininosuccinate lyase compare
ABI39_RS02875 -7.1 -13.7 glutamate-5-semialdehyde dehydrogenase compare
ABI39_RS10440 -7.1 -8.1 threonine synthase compare
ABI39_RS00405 -7.0 -19.7 phosphoribosylformylglycinamidine synthase compare
ABI39_RS12675 -7.0 -6.8 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABI39_RS16910 -7.0 -11.7 3-phosphoglycerate dehydrogenase compare
ABI39_RS10200 -7.0 -14.5 3-isopropylmalate dehydratase large subunit compare
ABI39_RS14150 -6.9 -15.5 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABI39_RS16905 -6.8 -13.2 3-phosphoserine/phosphohydroxythreonine transaminase compare
ABI39_RS19935 -6.8 -10.4 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
ABI39_RS12715 -6.8 -14.6 dihydroxy-acid dehydratase compare
ABI39_RS07790 -6.8 -7.4 M20 family metallo-hydrolase compare
ABI39_RS10510 -6.7 -11.5 prephenate dehydratase compare
ABI39_RS17315 -6.7 -10.3 alpha amylase C-terminal domain-containing protein compare
ABI39_RS10495 -6.7 -10.3 prephenate dehydrogenase compare
ABI39_RS17420 -6.7 -9.1 serine hydroxymethyltransferase compare
ABI39_RS01300 -6.6 -11.9 NADP-specific glutamate dehydrogenase compare
ABI39_RS10430 -6.5 -17.4 bifunctional aspartate kinase/homoserine dehydrogenase I compare
ABI39_RS02315 -6.5 -8.9 IMP dehydrogenase compare
ABI39_RS02975 -6.5 -11.8 argininosuccinate synthase compare
ABI39_RS02880 -6.5 -11.8 glutamate 5-kinase compare
ABI39_RS10435 -6.5 -12.4 cofactor-independent phosphoglycerate mutase compare
ABI39_RS10205 -6.4 -7.1 3-isopropylmalate dehydratase small subunit compare
ABI39_RS00770 -6.4 -14.7 pyridoxal phosphate-dependent aminotransferase compare
ABI39_RS10215 -6.3 -10.3 3-isopropylmalate dehydrogenase compare
ABI39_RS05660 -6.3 -11.5 acetyl-CoA hydrolase/transferase family protein compare
ABI39_RS21050 -6.3 -7.7 anthranilate synthase component I family protein compare
ABI39_RS12720 -6.2 -15.6 biosynthetic-type acetolactate synthase large subunit compare
ABI39_RS10260 -6.2 -10.2 adenylosuccinate synthase compare
ABI39_RS00475 -6.2 -5.6 phosphoribosylformylglycinamidine cyclo-ligase compare
ABI39_RS10500 -6.1 -7.3 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase type II compare
ABI39_RS02870 -6.1 -10.6 acetylornithine carbamoyltransferase compare
ABI39_RS10640 -6.1 -12.7 serine dehydratase subunit alpha family protein compare
ABI39_RS02970 -6.1 -11.1 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABI39_RS12665 -5.9 -9.0 shikimate dehydrogenase compare
ABI39_RS17945 -5.9 -15.2 glutamine synthetase III compare
ABI39_RS06250 -5.8 -13.5 4-phosphoerythronate dehydrogenase PdxB compare
ABI39_RS04795 -5.7 -3.9 M28 family peptidase compare
ABI39_RS19930 -5.7 -4.7 imidazole glycerol phosphate synthase subunit HisF compare
ABI39_RS04685 -5.6 -7.2 acetylglutamate kinase compare
ABI39_RS11845 -5.6 -10.7 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
ABI39_RS12735 -5.5 -10.8 ketol-acid reductoisomerase compare
ABI39_RS02500 -5.5 -8.4 pyridoxine 5'-phosphate synthase compare
ABI39_RS10870 -5.4 -12.5 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD compare
ABI39_RS14220 -5.4 -10.7 glycogen debranching enzyme N-terminal domain-containing protein compare
ABI39_RS19925 -5.4 -9.8 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABI39_RS11835 -5.4 -7.2 histidinol dehydrogenase compare
ABI39_RS10210 -5.4 -12.2 2-isopropylmalate synthase compare
ABI39_RS06675 -5.3 -10.0 2-oxoacid:ferredoxin oxidoreductase subunit beta compare
ABI39_RS21045 -5.3 -8.1 tryptophan synthase subunit beta compare
ABI39_RS02965 -5.3 -11.3 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme compare
ABI39_RS11840 -5.3 -8.0 histidinol-phosphate transaminase compare
ABI39_RS21065 -5.2 -6.8 indole-3-glycerol phosphate synthase TrpC compare
ABI39_RS06670 -5.2 -17.1 2-oxoacid:acceptor oxidoreductase subunit alpha compare
ABI39_RS05175 -5.1 -7.4 4-hydroxy-tetrahydrodipicolinate reductase compare
ABI39_RS11830 -5.0 -6.9 ATP phosphoribosyltransferase compare
ABI39_RS21060 -5.0 -8.1 anthranilate phosphoribosyltransferase compare
ABI39_RS10195 -4.9 -6.2 2-isopropylmalate synthase compare
ABI39_RS05450 -4.9 -5.8 redox-regulated ATPase YchF compare
ABI39_RS00205 -4.7 -3.2 phosphoglucosamine mutase compare
ABI39_RS18745 -4.6 -6.3 pyruvate:ferredoxin (flavodoxin) oxidoreductase compare
ABI39_RS04245 -4.6 -2.7 5-(carboxyamino)imidazole ribonucleotide mutase compare
ABI39_RS14560 -4.5 -4.6 aspartate 1-decarboxylase compare
ABI39_RS09575 -4.5 -5.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
ABI39_RS19920 -4.5 -7.9 imidazole glycerol phosphate synthase subunit HisH compare
ABI39_RS10505 -4.5 -11.6 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
ABI39_RS04860 -4.4 -4.2 HigA family addiction module antidote protein compare
ABI39_RS12955 -4.4 -4.3 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
ABI39_RS08035 -4.3 -3.0 adenylosuccinate lyase compare
ABI39_RS19385 -4.3 -5.1 hypothetical protein compare
ABI39_RS02755 -4.3 -2.9 glycosyltransferase compare
ABI39_RS15855 -4.2 -5.0 helix-turn-helix transcriptional regulator compare
ABI39_RS19950 -4.2 -2.9 diaminopimelate decarboxylase compare
ABI39_RS01415 -4.2 -2.9 branched-chain amino acid aminotransferase compare
ABI39_RS04885 -4.1 -4.0 calcium-translocating P-type ATPase, PMCA-type compare
ABI39_RS17140 -4.0 -3.9 AAA family ATPase compare
ABI39_RS19985 -3.8 -3.3 pyridoxal phosphate-dependent aminotransferase compare
ABI39_RS17170 -3.8 -3.6 protein BatD compare
ABI39_RS21055 -3.6 -5.0 aminodeoxychorismate/anthranilate synthase component II compare
ABI39_RS19945 -3.5 -12.1 aspartate kinase compare
ABI39_RS02985 -3.4 -8.2 arginine repressor compare
ABI39_RS02470 -3.4 -6.7 ATP-dependent DNA helicase RecG compare
ABI39_RS11655 -3.3 -4.5 MFS transporter compare
ABI39_RS04505 -3.3 -5.3 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
ABI39_RS09845 -3.2 -2.2 (d)CMP kinase compare
ABI39_RS12725 -3.2 -2.8 acetolactate synthase small subunit compare
ABI39_RS01360 -3.2 -9.9 hypothetical protein compare
ABI39_RS12560 -3.1 -9.7 GGGtGRT protein compare
ABI39_RS12755 -3.1 -3.7 SurA N-terminal domain-containing protein compare
ABI39_RS16880 -3.1 -5.1 Na(+)-translocating NADH-quinone reductase subunit C compare
ABI39_RS17160 -3.1 -3.6 VWA domain-containing protein compare
ABI39_RS03830 -3.0 -1.8 ribosome-associated translation inhibitor RaiA compare
ABI39_RS10110 -3.0 -14.2 S9 family peptidase compare
ABI39_RS12565 -3.0 -9.1 hypothetical protein compare
ABI39_RS04690 -3.0 -8.8 biosynthetic arginine decarboxylase compare
ABI39_RS07010 -2.9 -3.4 pyruvate kinase compare
ABI39_RS17950 -2.9 -3.4 Crp/Fnr family transcriptional regulator compare
ABI39_RS12980 -2.9 -3.9 HAD family hydrolase compare
ABI39_RS04230 -2.9 -6.6 RNA polymerase factor sigma-54 compare
ABI39_RS13180 -2.8 -6.6 FAD:protein FMN transferase compare
ABI39_RS00410 -2.8 -2.7 response regulator compare
ABI39_RS08195 -2.7 -8.1 hypothetical protein compare
ABI39_RS00520 -2.6 -9.3 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
ABI39_RS15415 -2.6 -6.9 hypothetical protein compare
ABI39_RS15410 -2.6 -6.4 DUF4296 domain-containing protein compare
ABI39_RS17640 -2.6 -5.6 YebC/PmpR family DNA-binding transcriptional regulator compare
ABI39_RS09955 -2.5 -8.3 aconitate hydratase compare
ABI39_RS07090 -2.5 -1.8 hypothetical protein compare
ABI39_RS09195 -2.5 -3.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABI39_RS06380 -2.5 -7.8 GH3 auxin-responsive promoter family protein compare
ABI39_RS06995 -2.5 -7.1 tetratricopeptide repeat protein compare
ABI39_RS17750 -2.4 -8.3 thiamine phosphate synthase compare
ABI39_RS09855 -2.4 -5.0 polyprenyl synthetase family protein compare
ABI39_RS00515 -2.4 -2.4 hypothetical protein compare
ABI39_RS17775 -2.3 -8.4 2-iminoacetate synthase ThiH compare
ABI39_RS04700 -2.3 -3.8 type I DNA topoisomerase compare
ABI39_RS20615 -2.3 -12.8 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
ABI39_RS01325 -2.3 -8.3 phosphoenolpyruvate synthase compare
ABI39_RS17795 -2.2 -8.1 thiamine phosphate synthase compare
ABI39_RS21350 -2.2 -2.1 aspartate--ammonia ligase compare
ABI39_RS18910 -2.2 -1.8 preprotein translocase subunit YajC compare
ABI39_RS17175 -2.2 -5.4 tetratricopeptide repeat protein compare
ABI39_RS13000 -2.1 -4.8 sigma-54-dependent Fis family transcriptional regulator compare
ABI39_RS09960 -2.1 -4.4 NADP-dependent isocitrate dehydrogenase compare
ABI39_RS12970 -2.1 -7.3 CDP-alcohol phosphatidyltransferase family protein compare
ABI39_RS16895 -2.1 -4.0 NADH:ubiquinone reductase (Na(+)-transporting) subunit F compare
ABI39_RS19915 -2.0 -10.9 formyltetrahydrofolate deformylase compare
ABI39_RS20405 -2.0 -5.4 GDP-L-fucose synthase compare
ABI39_RS17320 -2.0 -1.3 YhcH/YjgK/YiaL family protein compare
ABI39_RS17780 -2.0 -8.0 HesA/MoeB/ThiF family protein compare
ABI39_RS17150 -2.0 -3.4 hypothetical protein compare
ABI39_RS20070 -2.0 -6.3 UDP-glucose 4-epimerase GalE compare
ABI39_RS15840 -2.0 -3.6 hypothetical protein compare
ABI39_RS18330 -2.0 -8.7 PD40 domain-containing protein compare
ABI39_RS01295 -1.9 -9.5 NADP-dependent malic enzyme compare
ABI39_RS09835 -1.9 -9.0 6-phosphofructokinase compare
ABI39_RS17755 -1.9 -2.8 thiazole synthase compare
ABI39_RS10650 -1.8 -9.0 AraC family transcriptional regulator compare
ABI39_RS20360 -1.7 -5.4 phosphate signaling complex protein PhoU compare
ABI39_RS08305 -1.7 -5.9 DUF4831 family protein compare
ABI39_RS02725 -1.7 -7.0 CidA/LrgA family protein compare
ABI39_RS11940 -1.7 -11.1 saccharopine dehydrogenase family protein compare
ABI39_RS16320 -1.7 -1.9 DUF3989 domain-containing protein compare
ABI39_RS16875 -1.6 -3.4 NADH:ubiquinone reductase (Na(+)-transporting) subunit B compare
ABI39_RS18165 -1.6 -2.0 DUF5024 domain-containing protein compare
ABI39_RS09965 -1.6 -9.6 citrate/2-methylcitrate synthase compare
ABI39_RS08160 -1.6 -5.9 M23 family metallopeptidase compare
ABI39_RS14085 -1.6 -1.7 hypothetical protein compare
ABI39_RS21495 -1.6 -8.9 transporter compare
ABI39_RS13185 -1.5 -1.8 manganese efflux pump compare
ABI39_RS04930 -1.5 -2.3 helix-turn-helix transcriptional regulator compare
ABI39_RS15835 -1.5 -4.7 hypothetical protein compare
ABI39_RS18740 -1.5 -4.6 ATP-binding protein compare
ABI39_RS08175 -1.5 -3.0 anaerobic ribonucleoside-triphosphate reductase activating protein compare
ABI39_RS05650 -1.5 -9.4 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB compare
ABI39_RS13150 -1.4 -7.0 S41 family peptidase compare
ABI39_RS17765 -1.4 -1.6 hypothetical protein compare
ABI39_RS08145 -1.4 -2.1 DUF4290 domain-containing protein compare
ABI39_RS17745 -1.4 -2.3 sulfur carrier protein ThiS compare
ABI39_RS15360 -1.4 -4.1 Na+/H+ antiporter NhaC family protein compare
ABI39_RS16040 -1.4 -1.2 hypothetical protein compare
ABI39_RS06115 -1.3 -8.2 phosphatase PAP2 family protein compare
ABI39_RS13225 -1.3 -2.6 phosphopyruvate hydratase compare
ABI39_RS12770 -1.3 -2.7 hypothetical protein compare
ABI39_RS14300 -1.3 -7.1 ATP-binding cassette domain-containing protein compare
ABI39_RS12945 -1.3 -1.6 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN compare
ABI39_RS00050 -1.3 -3.7 hypothetical protein compare
ABI39_RS14715 -1.3 -4.8 RidA family protein compare
ABI39_RS17760 -1.3 -5.3 phosphomethylpyrimidine synthase ThiC compare
ABI39_RS16315 -1.3 -1.3 conjugative transposon protein TraK compare
ABI39_RS06060 -1.2 -3.2 S9 family peptidase compare
ABI39_RS18160 -1.2 -6.5 MFS transporter compare
ABI39_RS09230 -1.2 -1.6 hypothetical protein compare
ABI39_RS11670 -1.2 -1.8 molecular chaperone DnaJ compare
ABI39_RS06050 -1.2 -2.8 hypothetical protein compare
ABI39_RS09850 -1.1 -3.8 energy transducer TonB compare
ABI39_RS16885 -1.1 -2.1 NADH:ubiquinone reductase (Na(+)-transporting) subunit D compare
ABI39_RS14245 -1.1 -7.6 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
ABI39_RS20965 -1.1 -2.4 SPOR domain-containing protein compare
ABI39_RS13845 -1.1 -1.2 histone H1 compare
ABI39_RS17770 -1.1 -1.8 flavodoxin family protein compare
ABI39_RS16870 -1.1 -2.6 Na(+)-translocating NADH-quinone reductase subunit A compare
ABI39_RS11880 -1.1 -1.7 hypothetical protein compare
ABI39_RS11000 -1.1 -1.5 hypothetical protein compare
ABI39_RS05980 -1.1 -3.1 gluconate 5-dehydrogenase compare
ABI39_RS06065 -1.1 -1.5 RNA methyltransferase compare
ABI39_RS14265 -1.1 -5.7 ATP-dependent dethiobiotin synthetase BioD compare
ABI39_RS09670 -1.1 -1.4 cardiolipin synthase compare
ABI39_RS22135 -1.1 -2.6 type II toxin-antitoxin system RelE/ParE family toxin compare
ABI39_RS14360 -1.1 -5.7 6-phosphogluconolactonase compare
ABI39_RS02305 -1.0 -3.4 peptidyl-prolyl cis-trans isomerase compare


Specific Phenotypes

For 3 genes in this experiment

For carbon source D-Glucose in Phocaeicola dorei CL03T12C01

For carbon source D-Glucose across organisms