Experiment set1S405 for Phocaeicola dorei CL03T12C01

Compare to:

D-Fructose carbon source

200 most important genes:

  gene name fitness t score description  
ABI39_RS14225 -7.4 -10.1 glycosyltransferase compare
ABI39_RS21045 -7.0 -4.8 tryptophan synthase subunit beta compare
ABI39_RS00475 -6.8 -5.9 phosphoribosylformylglycinamidine cyclo-ligase compare
ABI39_RS02980 -6.7 -10.7 N-acetyltransferase compare
ABI39_RS10495 -6.6 -10.2 prephenate dehydrogenase compare
ABI39_RS10205 -6.6 -7.5 3-isopropylmalate dehydratase small subunit compare
ABI39_RS10500 -6.4 -6.2 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase type II compare
ABI39_RS14230 -6.4 -14.5 alpha-amylase compare
ABI39_RS04245 -6.3 -2.9 5-(carboxyamino)imidazole ribonucleotide mutase compare
ABI39_RS04695 -6.2 -8.3 shikimate kinase compare
ABI39_RS12715 -6.2 -14.0 dihydroxy-acid dehydratase compare
ABI39_RS10430 -6.1 -15.5 bifunctional aspartate kinase/homoserine dehydrogenase I compare
ABI39_RS02870 -6.1 -10.9 acetylornithine carbamoyltransferase compare
ABI39_RS19935 -6.0 -10.1 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
ABI39_RS11840 -6.0 -7.2 histidinol-phosphate transaminase compare
ABI39_RS21065 -6.0 -6.5 indole-3-glycerol phosphate synthase TrpC compare
ABI39_RS17315 -6.0 -12.1 alpha amylase C-terminal domain-containing protein compare
ABI39_RS10435 -5.9 -11.7 cofactor-independent phosphoglycerate mutase compare
ABI39_RS04685 -5.9 -7.7 acetylglutamate kinase compare
ABI39_RS12720 -5.9 -16.2 biosynthetic-type acetolactate synthase large subunit compare
ABI39_RS02975 -5.9 -9.3 argininosuccinate synthase compare
ABI39_RS21060 -5.7 -7.2 anthranilate phosphoribosyltransferase compare
ABI39_RS04795 -5.7 -3.9 M28 family peptidase compare
ABI39_RS07095 -5.6 -22.2 argininosuccinate lyase compare
ABI39_RS02875 -5.6 -11.5 glutamate-5-semialdehyde dehydrogenase compare
ABI39_RS10260 -5.6 -8.5 adenylosuccinate synthase compare
ABI39_RS07790 -5.6 -9.4 M20 family metallo-hydrolase compare
ABI39_RS02970 -5.5 -10.5 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABI39_RS11835 -5.5 -8.3 histidinol dehydrogenase compare
ABI39_RS10200 -5.5 -15.0 3-isopropylmalate dehydratase large subunit compare
ABI39_RS06250 -5.5 -9.0 4-phosphoerythronate dehydrogenase PdxB compare
ABI39_RS00405 -5.5 -17.2 phosphoribosylformylglycinamidine synthase compare
ABI39_RS02500 -5.4 -9.1 pyridoxine 5'-phosphate synthase compare
ABI39_RS10510 -5.4 -12.1 prephenate dehydratase compare
ABI39_RS02960 -5.3 -13.7 pyrroline-5-carboxylate reductase compare
ABI39_RS06670 -5.3 -16.2 2-oxoacid:acceptor oxidoreductase subunit alpha compare
ABI39_RS16910 -5.3 -10.1 3-phosphoglycerate dehydrogenase compare
ABI39_RS07005 -5.3 -7.2 type II 3-dehydroquinate dehydratase compare
ABI39_RS00770 -5.3 -18.2 pyridoxal phosphate-dependent aminotransferase compare
ABI39_RS11845 -5.3 -10.7 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
ABI39_RS02315 -5.2 -11.2 IMP dehydrogenase compare
ABI39_RS12735 -5.2 -10.0 ketol-acid reductoisomerase compare
ABI39_RS01300 -5.2 -10.2 NADP-specific glutamate dehydrogenase compare
ABI39_RS08235 -5.2 -10.2 carbohydrate kinase compare
ABI39_RS12675 -5.2 -6.5 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABI39_RS16905 -5.2 -14.1 3-phosphoserine/phosphohydroxythreonine transaminase compare
ABI39_RS10215 -5.1 -12.8 3-isopropylmalate dehydrogenase compare
ABI39_RS12645 -5.1 -13.1 chorismate synthase compare
ABI39_RS06055 -5.1 -10.9 phosphoribosylamine--glycine ligase compare
ABI39_RS10505 -4.9 -12.5 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
ABI39_RS21075 -4.9 -6.7 tryptophan synthase subunit alpha compare
ABI39_RS12665 -4.9 -9.1 shikimate dehydrogenase compare
ABI39_RS19385 -4.9 -4.7 hypothetical protein compare
ABI39_RS17420 -4.8 -7.1 serine hydroxymethyltransferase compare
ABI39_RS10870 -4.8 -15.3 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD compare
ABI39_RS09575 -4.7 -4.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
ABI39_RS06675 -4.6 -11.3 2-oxoacid:ferredoxin oxidoreductase subunit beta compare
ABI39_RS10640 -4.6 -12.3 serine dehydratase subunit alpha family protein compare
ABI39_RS10210 -4.6 -13.1 2-isopropylmalate synthase compare
ABI39_RS02880 -4.6 -11.7 glutamate 5-kinase compare
ABI39_RS12955 -4.6 -3.1 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
ABI39_RS21050 -4.5 -7.3 anthranilate synthase component I family protein compare
ABI39_RS10440 -4.5 -13.0 threonine synthase compare
ABI39_RS05660 -4.5 -10.1 acetyl-CoA hydrolase/transferase family protein compare
ABI39_RS19925 -4.4 -6.5 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABI39_RS19985 -4.4 -4.0 pyridoxal phosphate-dependent aminotransferase compare
ABI39_RS19930 -4.3 -8.3 imidazole glycerol phosphate synthase subunit HisF compare
ABI39_RS10195 -4.3 -8.2 2-isopropylmalate synthase compare
ABI39_RS02965 -4.3 -14.2 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme compare
ABI39_RS04230 -4.2 -6.5 RNA polymerase factor sigma-54 compare
ABI39_RS08035 -4.2 -2.9 adenylosuccinate lyase compare
ABI39_RS00205 -4.2 -4.1 phosphoglucosamine mutase compare
ABI39_RS05175 -4.2 -7.4 4-hydroxy-tetrahydrodipicolinate reductase compare
ABI39_RS01415 -4.1 -2.8 branched-chain amino acid aminotransferase compare
ABI39_RS08240 -4.1 -18.5 substrate-binding domain-containing protein compare
ABI39_RS19950 -4.1 -2.8 diaminopimelate decarboxylase compare
ABI39_RS19920 -4.0 -6.4 imidazole glycerol phosphate synthase subunit HisH compare
ABI39_RS11830 -3.9 -4.7 ATP phosphoribosyltransferase compare
ABI39_RS18910 -3.9 -2.6 preprotein translocase subunit YajC compare
ABI39_RS07010 -3.8 -2.6 pyruvate kinase compare
ABI39_RS14150 -3.7 -13.7 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABI39_RS14220 -3.7 -8.0 glycogen debranching enzyme N-terminal domain-containing protein compare
ABI39_RS17140 -3.7 -3.6 AAA family ATPase compare
ABI39_RS18745 -3.7 -7.1 pyruvate:ferredoxin (flavodoxin) oxidoreductase compare
ABI39_RS02755 -3.7 -3.6 glycosyltransferase compare
ABI39_RS04885 -3.6 -4.9 calcium-translocating P-type ATPase, PMCA-type compare
ABI39_RS14560 -3.6 -5.0 aspartate 1-decarboxylase compare
ABI39_RS06995 -3.5 -8.0 tetratricopeptide repeat protein compare
ABI39_RS04700 -3.5 -3.4 type I DNA topoisomerase compare
ABI39_RS19945 -3.4 -10.8 aspartate kinase compare
ABI39_RS04860 -3.4 -2.5 HigA family addiction module antidote protein compare
ABI39_RS10110 -3.3 -11.9 S9 family peptidase compare
ABI39_RS12980 -3.3 -3.8 HAD family hydrolase compare
ABI39_RS17945 -3.3 -11.5 glutamine synthetase III compare
ABI39_RS17950 -3.2 -3.0 Crp/Fnr family transcriptional regulator compare
ABI39_RS09845 -3.2 -2.2 (d)CMP kinase compare
ABI39_RS04505 -3.1 -8.3 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
ABI39_RS08230 -3.1 -8.5 MFS transporter compare
ABI39_RS17160 -3.0 -3.5 VWA domain-containing protein compare
ABI39_RS12755 -3.0 -3.5 SurA N-terminal domain-containing protein compare
ABI39_RS04690 -2.9 -8.8 biosynthetic arginine decarboxylase compare
ABI39_RS18330 -2.8 -11.2 PD40 domain-containing protein compare
ABI39_RS08195 -2.7 -8.0 hypothetical protein compare
ABI39_RS05450 -2.7 -4.1 redox-regulated ATPase YchF compare
ABI39_RS12565 -2.7 -5.8 hypothetical protein compare
ABI39_RS08180 -2.6 -13.4 anaerobic ribonucleoside triphosphate reductase compare
ABI39_RS01360 -2.6 -6.6 hypothetical protein compare
ABI39_RS15415 -2.6 -5.8 hypothetical protein compare
ABI39_RS21350 -2.6 -1.8 aspartate--ammonia ligase compare
ABI39_RS12560 -2.6 -11.9 GGGtGRT protein compare
ABI39_RS08305 -2.6 -8.2 DUF4831 family protein compare
ABI39_RS17640 -2.5 -5.1 YebC/PmpR family DNA-binding transcriptional regulator compare
ABI39_RS17170 -2.5 -3.8 protein BatD compare
ABI39_RS08175 -2.5 -4.1 anaerobic ribonucleoside-triphosphate reductase activating protein compare
ABI39_RS07090 -2.4 -1.8 hypothetical protein compare
ABI39_RS02985 -2.4 -7.7 arginine repressor compare
ABI39_RS12725 -2.4 -3.1 acetolactate synthase small subunit compare
ABI39_RS09195 -2.3 -3.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABI39_RS00520 -2.3 -8.5 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
ABI39_RS18160 -2.1 -10.4 MFS transporter compare
ABI39_RS19915 -2.1 -11.3 formyltetrahydrofolate deformylase compare
ABI39_RS11655 -2.1 -4.2 MFS transporter compare
ABI39_RS02355 -2.1 -8.8 ABC transporter ATP-binding protein compare
ABI39_RS17795 -2.0 -5.1 thiamine phosphate synthase compare
ABI39_RS20175 -2.0 -3.3 translation elongation factor 4 compare
ABI39_RS17750 -2.0 -4.4 thiamine phosphate synthase compare
ABI39_RS10650 -1.9 -10.7 AraC family transcriptional regulator compare
ABI39_RS20615 -1.9 -9.8 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
ABI39_RS18740 -1.9 -6.4 ATP-binding protein compare
ABI39_RS17150 -1.9 -3.3 hypothetical protein compare
ABI39_RS02350 -1.9 -8.1 ABC transporter permease compare
ABI39_RS13000 -1.8 -3.8 sigma-54-dependent Fis family transcriptional regulator compare
ABI39_RS17755 -1.8 -4.5 thiazole synthase compare
ABI39_RS21055 -1.8 -4.6 aminodeoxychorismate/anthranilate synthase component II compare
ABI39_RS15840 -1.8 -2.3 hypothetical protein compare
ABI39_RS17780 -1.7 -8.0 HesA/MoeB/ThiF family protein compare
ABI39_RS04970 -1.7 -5.5 Holliday junction branch migration DNA helicase RuvB compare
ABI39_RS17320 -1.7 -1.6 YhcH/YjgK/YiaL family protein compare
ABI39_RS16315 -1.7 -1.5 conjugative transposon protein TraK compare
ABI39_RS01325 -1.6 -8.5 phosphoenolpyruvate synthase compare
ABI39_RS06115 -1.6 -8.8 phosphatase PAP2 family protein compare
ABI39_RS17775 -1.6 -8.7 2-iminoacetate synthase ThiH compare
ABI39_RS09835 -1.6 -7.4 6-phosphofructokinase compare
ABI39_RS17745 -1.5 -1.8 sulfur carrier protein ThiS compare
ABI39_RS17175 -1.5 -3.0 tetratricopeptide repeat protein compare
ABI39_RS04930 -1.5 -3.4 helix-turn-helix transcriptional regulator compare
ABI39_RS06050 -1.4 -3.1 hypothetical protein compare
ABI39_RS16485 -1.3 -2.1 hypothetical protein compare
ABI39_RS02375 -1.3 -3.0 DUF177 domain-containing protein compare
ABI39_RS09855 -1.3 -4.5 polyprenyl synthetase family protein compare
ABI39_RS08145 -1.3 -2.1 DUF4290 domain-containing protein compare
ABI39_RS17770 -1.3 -3.2 flavodoxin family protein compare
ABI39_RS06060 -1.3 -3.4 S9 family peptidase compare
ABI39_RS12945 -1.2 -1.8 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN compare
ABI39_RS18360 -1.2 -2.0 helix-turn-helix domain-containing protein compare
ABI39_RS17965 -1.2 -3.1 YegS/Rv2252/BmrU family lipid kinase compare
ABI39_RS11570 -1.2 -5.1 transporter substrate-binding domain-containing protein compare
ABI39_RS17765 -1.2 -2.9 hypothetical protein compare
ABI39_RS12970 -1.2 -4.0 CDP-alcohol phosphatidyltransferase family protein compare
ABI39_RS02140 -1.2 -2.4 TetR/AcrR family transcriptional regulator compare
ABI39_RS15855 -1.2 -3.0 helix-turn-helix transcriptional regulator compare
ABI39_RS02470 -1.2 -3.9 ATP-dependent DNA helicase RecG compare
ABI39_RS12805 -1.2 -2.4 hypothetical protein compare
ABI39_RS11940 -1.1 -6.7 saccharopine dehydrogenase family protein compare
ABI39_RS16500 -1.1 -6.6 redoxin domain-containing protein compare
ABI39_RS09670 -1.1 -1.2 cardiolipin synthase compare
ABI39_RS12965 -1.1 -6.2 hypothetical protein compare
ABI39_RS16305 -1.1 -1.1 DUF4141 domain-containing protein compare
ABI39_RS18320 -1.1 -1.4 hypothetical protein compare
ABI39_RS02480 -1.1 -3.2 DJ-1/PfpI family protein compare
ABI39_RS13185 -1.1 -1.4 manganese efflux pump compare
ABI39_RS09955 -1.1 -4.1 aconitate hydratase compare
ABI39_RS03160 -1.1 -1.9 helix-turn-helix domain-containing protein compare
ABI39_RS15835 -1.1 -3.2 hypothetical protein compare
ABI39_RS16880 -1.0 -2.8 Na(+)-translocating NADH-quinone reductase subunit C compare
ABI39_RS00410 -1.0 -2.3 response regulator compare
ABI39_RS09960 -1.0 -3.3 NADP-dependent isocitrate dehydrogenase compare
ABI39_RS18300 -1.0 -3.1 bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase compare
ABI39_RS08850 -1.0 -2.6 toprim domain-containing protein compare
ABI39_RS02725 -1.0 -5.7 CidA/LrgA family protein compare
ABI39_RS09230 -1.0 -2.1 hypothetical protein compare
ABI39_RS08165 -1.0 -1.8 1-deoxy-D-xylulose-5-phosphate reductoisomerase compare
ABI39_RS08315 -1.0 -3.6 hypoxanthine phosphoribosyltransferase compare
ABI39_RS00050 -1.0 -4.0 hypothetical protein compare
ABI39_RS17760 -1.0 -4.6 phosphomethylpyrimidine synthase ThiC compare
ABI39_RS15360 -1.0 -2.3 Na+/H+ antiporter NhaC family protein compare
ABI39_RS12435 -1.0 -4.3 GNAT family N-acetyltransferase compare
ABI39_RS09285 -1.0 -2.1 hypothetical protein compare
ABI39_RS04285 -1.0 -5.3 tetratricopeptide repeat protein compare
ABI39_RS11810 -1.0 -6.2 transglycosylase SLT domain-containing protein compare
ABI39_RS12960 -1.0 -6.3 NDP-sugar synthase compare
ABI39_RS13150 -1.0 -5.3 S41 family peptidase compare
ABI39_RS20360 -0.9 -3.4 phosphate signaling complex protein PhoU compare
ABI39_RS05650 -0.9 -5.3 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB compare
ABI39_RS02290 -0.9 -2.2 hypothetical protein compare
ABI39_RS18165 -0.9 -1.4 DUF5024 domain-containing protein compare
ABI39_RS20095 -0.9 -5.6 RnfABCDGE type electron transport complex subunit D compare
ABI39_RS13180 -0.9 -3.0 FAD:protein FMN transferase compare
ABI39_RS00515 -0.9 -1.7 hypothetical protein compare
ABI39_RS01040 -0.9 -3.3 L-rhamnose mutarotase compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source D-Fructose in Phocaeicola dorei CL03T12C01

For carbon source D-Fructose across organisms