Experiment set1S402 for Phocaeicola dorei CL03T12C01

Compare to:

B-glucan from yeast carbon source

200 most detrimental genes:

  gene name fitness t score description  
ABI39_RS04435 +2.6 21.4 glycoside hydrolase family 97 protein compare
ABI39_RS07885 +2.5 17.4 hypothetical protein compare
ABI39_RS02375 +1.2 5.3 DUF177 domain-containing protein compare
ABI39_RS12535 +1.2 2.3 hypothetical protein compare
ABI39_RS06330 +1.1 5.5 ribonuclease III compare
ABI39_RS06725 +1.1 3.1 hypothetical protein compare
ABI39_RS15735 +1.1 1.9 hypothetical protein compare
ABI39_RS08240 +1.0 6.2 substrate-binding domain-containing protein compare
ABI39_RS08810 +1.0 1.9 DUF3876 domain-containing protein compare
ABI39_RS05805 +1.0 3.0 class IIb bacteriocin, lactobin A/cerein 7B family compare
ABI39_RS07290 +1.0 1.2 helix-turn-helix domain-containing protein compare
ABI39_RS08145 +1.0 1.9 DUF4290 domain-containing protein compare
ABI39_RS03830 +0.9 1.1 ribosome-associated translation inhibitor RaiA compare
ABI39_RS18205 +0.9 0.9 class I SAM-dependent methyltransferase compare
ABI39_RS11375 +0.9 2.2 outer membrane beta-barrel protein compare
ABI39_RS13390 +0.9 1.0 UpxY family transcription antiterminator compare
ABI39_RS19770 +0.9 1.1 tRNA-Asn compare
ABI39_RS08480 +0.9 1.4 histidine kinase compare
ABI39_RS11185 +0.9 1.5 DUF3408 domain-containing protein compare
ABI39_RS22930 +0.9 3.7 hypothetical protein compare
ABI39_RS14035 +0.9 3.9 energy-dependent translational throttle protein EttA compare
ABI39_RS23055 +0.9 3.6 hypothetical protein compare
ABI39_RS08685 +0.8 2.3 hypothetical protein compare
ABI39_RS13910 +0.8 0.7 chaperone modulator CbpM compare
ABI39_RS19470 +0.8 1.5 hypothetical protein compare
ABI39_RS15365 +0.8 2.4 altronate dehydratase compare
ABI39_RS08220 +0.8 6.4 TonB-dependent receptor compare
ABI39_RS22975 +0.8 2.0 hypothetical protein compare
ABI39_RS15710 +0.8 1.3 hypothetical protein compare
ABI39_RS12410 +0.8 3.5 sodium ion-translocating decarboxylase subunit beta compare
ABI39_RS21200 +0.8 2.8 MFS transporter compare
ABI39_RS15845 +0.8 1.3 hypothetical protein compare
ABI39_RS20215 +0.8 1.0 DUF4248 domain-containing protein compare
ABI39_RS16980 +0.8 2.0 helix-turn-helix transcriptional regulator compare
ABI39_RS05080 +0.7 1.5 helix-turn-helix transcriptional regulator compare
ABI39_RS11490 +0.7 1.1 hypothetical protein compare
ABI39_RS14875 +0.7 2.6 hypothetical protein compare
ABI39_RS19750 +0.7 1.2 tRNA-Tyr compare
ABI39_RS12585 +0.7 4.5 hypothetical protein compare
ABI39_RS12170 +0.7 0.8 MarR family transcriptional regulator compare
ABI39_RS11805 +0.7 1.0 hypothetical protein compare
ABI39_RS12085 +0.7 1.8 DUF4248 domain-containing protein compare
ABI39_RS07205 +0.7 2.5 helix-turn-helix domain-containing protein compare
ABI39_RS06940 +0.7 3.3 LicD family protein compare
ABI39_RS07795 +0.7 4.3 long-chain fatty acid--CoA ligase compare
ABI39_RS19805 +0.6 1.5 hypothetical protein compare
ABI39_RS20180 +0.6 2.0 antitoxin HicB compare
ABI39_RS14050 +0.6 2.7 hypothetical protein compare
ABI39_RS14390 +0.6 2.3 ABC transporter ATP-binding protein compare
ABI39_RS17105 +0.6 1.2 CinA family protein compare
ABI39_RS17575 +0.6 2.6 glycosyltransferase compare
ABI39_RS03555 +0.6 1.5 DUF4252 domain-containing protein compare
ABI39_RS13750 +0.6 2.7 hypothetical protein compare
ABI39_RS19270 +0.6 2.3 flavodoxin compare
ABI39_RS19630 +0.6 1.0 hypothetical protein compare
ABI39_RS06165 +0.6 1.2 GtrA family protein compare
ABI39_RS18965 +0.6 2.2 site-specific integrase compare
ABI39_RS16315 +0.6 0.7 conjugative transposon protein TraK compare
ABI39_RS09640 +0.6 1.2 HigA family addiction module antidote protein compare
ABI39_RS19955 +0.6 2.8 hypothetical protein compare
ABI39_RS14130 +0.6 1.3 hypothetical protein compare
ABI39_RS06080 +0.6 1.4 DNA starvation/stationary phase protection protein compare
ABI39_RS18935 +0.6 2.7 RNA-binding S4 domain-containing protein compare
ABI39_RS02660 +0.6 4.4 TonB-dependent receptor compare
ABI39_RS17990 +0.6 2.3 glutamine-hydrolyzing GMP synthase compare
ABI39_RS10360 +0.6 2.9 homoserine O-succinyltransferase compare
ABI39_RS11680 +0.6 3.6 ATP-binding cassette domain-containing protein compare
ABI39_RS21190 +0.6 1.3 dihydrodipicolinate synthase family protein compare
ABI39_RS15965 +0.6 1.4 hypothetical protein compare
ABI39_RS12435 +0.6 2.6 GNAT family N-acetyltransferase compare
ABI39_RS15800 +0.6 2.2 hypothetical protein compare
ABI39_RS13995 +0.6 3.2 clostripain compare
ABI39_RS11510 +0.6 2.3 50S ribosomal protein L11 methyltransferase compare
ABI39_RS18850 +0.5 1.8 twin-arginine translocase TatA/TatE family subunit compare
ABI39_RS12150 +0.5 1.2 hotdog fold thioesterase compare
ABI39_RS18845 +0.5 3.3 twin-arginine translocase subunit TatC compare
ABI39_RS16495 +0.5 3.2 phosphoserine phosphatase SerB compare
ABI39_RS20765 +0.5 3.0 IS66 family insertion sequence element accessory protein TnpB compare
ABI39_RS12550 +0.5 2.0 hypothetical protein compare
ABI39_RS05615 +0.5 2.3 tRNA pseudouridine(55) synthase TruB compare
ABI39_RS00395 +0.5 1.9 DUF4924 family protein compare
ABI39_RS08295 +0.5 1.4 DUF3332 domain-containing protein compare
ABI39_RS03855 +0.5 2.9 porin family protein compare
ABI39_RS14060 +0.5 0.7 hypothetical protein compare
ABI39_RS12560 +0.5 2.8 GGGtGRT protein compare
ABI39_RS18395 +0.5 1.0 hypothetical protein compare
ABI39_RS14995 +0.5 1.2 F0F1 ATP synthase subunit B compare
ABI39_RS17980 +0.5 2.8 large-conductance mechanosensitive channel protein MscL compare
ABI39_RS17790 +0.5 0.8 hypothetical protein compare
ABI39_RS05215 +0.5 1.7 acyl-CoA thioesterase compare
ABI39_RS12565 +0.5 2.6 hypothetical protein compare
ABI39_RS12915 +0.5 2.1 DUF4136 domain-containing protein compare
ABI39_RS16940 +0.5 2.1 Cof-type HAD-IIB family hydrolase compare
ABI39_RS07650 +0.5 2.9 hypothetical protein compare
ABI39_RS11560 +0.5 2.6 DUF4421 domain-containing protein compare
ABI39_RS23065 +0.5 1.4 hypothetical protein compare
ABI39_RS15300 +0.5 3.6 excinuclease ABC subunit UvrB compare
ABI39_RS18540 +0.5 1.6 hypothetical protein compare
ABI39_RS13610 +0.5 1.8 glycosyltransferase family 2 protein compare
ABI39_RS18390 +0.5 0.7 DUF3987 domain-containing protein compare
ABI39_RS20970 +0.5 1.3 YtxH domain-containing protein compare
ABI39_RS10225 +0.5 2.3 peptide-methionine (S)-S-oxide reductase MsrA compare
ABI39_RS10750 +0.5 1.9 DUF2149 domain-containing protein compare
ABI39_RS17955 +0.5 1.6 ferritin compare
ABI39_RS13225 +0.5 0.9 phosphopyruvate hydratase compare
ABI39_RS18905 +0.5 1.8 YbbR-like domain-containing protein compare
ABI39_RS14575 +0.5 1.0 NAD(+) diphosphatase compare
ABI39_RS07590 +0.5 1.4 site-specific integrase compare
ABI39_RS00785 +0.5 2.1 5'-nucleotidase C-terminal domain-containing protein compare
ABI39_RS05635 +0.5 0.6 class I SAM-dependent methyltransferase compare
ABI39_RS01905 +0.5 1.6 [FeFe] hydrogenase H-cluster radical SAM maturase HydE compare
ABI39_RS09635 +0.5 1.6 type II toxin-antitoxin system RelE/ParE family toxin compare
ABI39_RS20705 +0.5 1.5 hypothetical protein compare
ABI39_RS19665 +0.5 1.2 hypothetical protein compare
ABI39_RS20020 +0.5 1.9 DUF3943 domain-containing protein compare
ABI39_RS13565 +0.4 2.3 acetyltransferase compare
ABI39_RS16735 +0.4 2.4 DegT/DnrJ/EryC1/StrS family aminotransferase compare
ABI39_RS09290 +0.4 1.6 YjjG family noncanonical pyrimidine nucleotidase compare
ABI39_RS12975 +0.4 1.8 flippase-like domain-containing protein compare
ABI39_RS06885 +0.4 1.5 hypothetical protein compare
ABI39_RS14790 +0.4 2.8 glycosyltransferase compare
ABI39_RS16500 +0.4 2.4 redoxin domain-containing protein compare
ABI39_RS20350 +0.4 1.0 nucleotidyltransferase domain-containing protein compare
ABI39_RS02745 +0.4 1.7 DUF59 domain-containing protein compare
ABI39_RS07630 +0.4 2.8 Crp/Fnr family transcriptional regulator compare
ABI39_RS05850 +0.4 2.3 DUF4884 domain-containing protein compare
ABI39_RS12130 +0.4 1.5 MmcQ/YjbR family DNA-binding protein compare
ABI39_RS04495 +0.4 1.5 OprO/OprP family phosphate-selective porin compare
ABI39_RS01450 +0.4 1.8 DUF3244 domain-containing protein compare
ABI39_RS20140 +0.4 1.4 copper homeostasis protein CutC compare
ABI39_RS12680 +0.4 1.0 PhoH family protein compare
ABI39_RS01590 +0.4 2.0 metallophosphoesterase family protein compare
ABI39_RS09945 +0.4 1.4 thioesterase family protein compare
ABI39_RS09855 +0.4 1.6 polyprenyl synthetase family protein compare
ABI39_RS07215 +0.4 1.0 hypothetical protein compare
ABI39_RS01910 +0.4 2.6 [FeFe] hydrogenase H-cluster radical SAM maturase HydG compare
ABI39_RS22350 +0.4 1.0 glycoside hydrolase family 99-like domain-containing protein compare
ABI39_RS12210 +0.4 1.3 porin compare
ABI39_RS20625 +0.4 1.8 patatin-like phospholipase family protein compare
ABI39_RS09460 +0.4 0.9 histidine phosphatase family protein compare
ABI39_RS14760 +0.4 1.3 glycosyltransferase family 2 protein compare
ABI39_RS15925 +0.4 1.7 helix-turn-helix domain-containing protein compare
ABI39_RS11600 +0.4 1.4 tetratricopeptide repeat protein compare
ABI39_RS19785 +0.4 2.3 terminase family protein compare
ABI39_RS23100 +0.4 0.8 hypothetical protein compare
ABI39_RS00350 +0.4 1.5 hypothetical protein compare
ABI39_RS05525 +0.4 1.4 TatD family hydrolase compare
ABI39_RS20050 +0.4 1.3 lipocalin-like domain-containing protein compare
ABI39_RS16490 +0.4 1.6 DEAD/DEAH box helicase compare
ABI39_RS03545 +0.4 1.4 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase compare
ABI39_RS16040 +0.4 0.4 hypothetical protein compare
ABI39_RS13560 +0.4 0.9 sugar transferase compare
ABI39_RS12880 +0.4 2.0 SIMPL domain-containing protein compare
ABI39_RS08890 +0.4 1.7 PcfJ family protein compare
ABI39_RS04440 +0.4 2.7 TonB-dependent receptor compare
ABI39_RS20575 +0.4 2.2 glycosyltransferase family 2 protein compare
ABI39_RS18565 +0.4 2.3 DUF3375 domain-containing protein compare
ABI39_RS11330 +0.4 1.8 hypothetical protein compare
ABI39_RS22940 +0.4 1.0 hypothetical protein compare
ABI39_RS13510 +0.4 2.4 RagB/SusD family nutrient uptake outer membrane protein compare
ABI39_RS08840 +0.4 1.6 conjugative transposon protein TraN compare
ABI39_RS11685 +0.4 2.2 SGNH/GDSL hydrolase family protein compare
ABI39_RS06315 +0.4 1.9 phosphoribosylglycinamide formyltransferase compare
ABI39_RS14770 +0.4 1.7 acyltransferase compare
ABI39_RS10140 +0.4 2.2 SPFH domain-containing protein compare
ABI39_RS11270 +0.4 1.4 MBL fold metallo-hydrolase compare
ABI39_RS02860 +0.4 1.8 NigD-like N-terminal domain-containing protein compare
ABI39_RS16435 +0.4 1.4 hypothetical protein compare
ABI39_RS23095 +0.4 1.3 hypothetical protein compare
ABI39_RS09715 +0.4 2.0 lytic transglycosylase domain-containing protein compare
ABI39_RS13090 +0.4 1.3 hypothetical protein compare
ABI39_RS10050 +0.4 2.5 RagB/SusD family nutrient uptake outer membrane protein compare
ABI39_RS08355 +0.4 1.6 PorT family protein compare
ABI39_RS01585 +0.4 2.4 RNA degradosome polyphosphate kinase compare
ABI39_RS01320 +0.4 0.7 calycin-like domain-containing protein compare
ABI39_RS19990 +0.4 2.1 fucose isomerase compare
ABI39_RS15160 +0.4 1.3 hypothetical protein compare
ABI39_RS05765 +0.4 0.6 DUF4294 domain-containing protein compare
ABI39_RS18655 +0.4 1.6 alcohol dehydrogenase catalytic domain-containing protein compare
ABI39_RS04200 +0.4 1.8 Na/Pi cotransporter family protein compare
ABI39_RS19080 +0.4 0.9 aldo/keto reductase compare
ABI39_RS01375 +0.3 1.7 ABC transporter permease compare
ABI39_RS17645 +0.3 0.8 TIGR03905 family TSCPD domain-containing protein compare
ABI39_RS18130 +0.3 1.1 secondary thiamine-phosphate synthase enzyme YjbQ compare
ABI39_RS10410 +0.3 2.4 FAD-binding protein compare
ABI39_RS02130 +0.3 2.0 RNA pseudouridine synthase compare
ABI39_RS11865 +0.3 2.0 thioredoxin compare
ABI39_RS02905 +0.3 1.1 SusD family outer membrane lipoprotein NanU compare
ABI39_RS15440 +0.3 0.8 hypothetical protein compare
ABI39_RS18490 +0.3 0.5 helix-turn-helix domain-containing protein compare
ABI39_RS00440 +0.3 2.4 excinuclease ABC subunit UvrA compare
ABI39_RS11880 +0.3 0.3 hypothetical protein compare
ABI39_RS19800 +0.3 1.3 hypothetical protein compare
ABI39_RS11465 +0.3 2.2 YgiQ family radical SAM protein compare
ABI39_RS13215 +0.3 2.6 ATP-dependent DNA helicase RecQ compare
ABI39_RS10780 +0.3 1.9 DUF3868 domain-containing protein compare
ABI39_RS15980 +0.3 1.4 hypothetical protein compare
ABI39_RS22900 +0.3 1.1 site-specific DNA-methyltransferase compare
ABI39_RS14680 +0.3 1.1 methylcobamide--CoM methyltransferase compare
ABI39_RS18020 +0.3 0.9 GlsB/YeaQ/YmgE family stress response membrane protein compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source B-glucan from yeast in Phocaeicola dorei CL03T12C01

For carbon source B-glucan from yeast across organisms