Experiment set1S391 for Escherichia coli HS(pFamp)R (ATCC 700891)

Compare to:

T4 MOI1

200 most important genes:

  gene name fitness t score description  
OHPLBJKB_01660 -5.2 -3.6 dTDP-glucose 4,6-dehydratase 2 compare
OHPLBJKB_01661 -4.7 -6.5 Glucose-1-phosphate thymidylyltransferase 2 compare
OHPLBJKB_02954 -4.6 -6.3 UDP-glucose 4-epimerase compare
OHPLBJKB_01652 -4.5 -3.1 hypothetical protein compare
OHPLBJKB_01662 -4.3 -3.0 dTDP-4-dehydrorhamnose reductase compare
OHPLBJKB_01653 -4.0 -2.7 hypothetical protein compare
OHPLBJKB_01663 -3.7 -2.5 dTDP-4-dehydrorhamnose 3,5-epimerase compare
OHPLBJKB_03543 -3.2 -2.2 Aconitate hydratase B compare
OHPLBJKB_00908 -2.5 -3.4 RecBCD enzyme subunit RecC compare
OHPLBJKB_04235 -2.4 -2.8 Magnesium transport protein CorA compare
OHPLBJKB_00821 -2.1 -4.2 Tyrosine recombinase XerD compare
OHPLBJKB_04130 -2.1 -2.8 hypothetical protein compare
OHPLBJKB_03865 -2.1 -3.4 Adenylosuccinate synthetase compare
OHPLBJKB_04276 -1.9 -2.2 ATP-dependent DNA helicase Rep compare
OHPLBJKB_02780 -1.9 -2.8 Thioredoxin reductase compare
OHPLBJKB_01649 -1.9 -8.1 hypothetical protein compare
OHPLBJKB_01651 -1.9 -3.4 Putative tyrosine-protein kinase in cps region compare
OHPLBJKB_04260 -1.9 -10.9 putative ECA polymerase compare
OHPLBJKB_02047 -1.8 -2.0 Major outer membrane prolipoprotein Lpp compare
OHPLBJKB_00074 -1.8 -3.4 hypothetical protein compare
OHPLBJKB_01418 -1.8 -2.2 NAD(P)H-quinone oxidoreductase subunit 3 compare
OHPLBJKB_04204 -1.8 -3.8 Trk system potassium uptake protein TrkH compare
OHPLBJKB_01387 -1.8 -3.4 tRNA pseudouridine synthase A compare
OHPLBJKB_00519 -1.7 -2.6 Transcription elongation factor GreA compare
OHPLBJKB_04088 -1.6 -2.4 Soluble pyridine nucleotide transhydrogenase compare
OHPLBJKB_00210 -1.6 -4.4 Low-affinity inorganic phosphate transporter 1 compare
OHPLBJKB_03501 -1.6 -3.0 Periplasmic serine endoprotease DegP compare
OHPLBJKB_00071 -1.6 -1.8 Lipopolysaccharide core biosynthesis protein RfaG compare
OHPLBJKB_00092 -1.6 -2.9 Serine acetyltransferase compare
OHPLBJKB_01035 -1.6 -2.8 Protein RecA compare
OHPLBJKB_03607 -1.5 -5.4 'Bis(5'-nucleosyl)-tetraphosphatase, symmetrical' transl_table=11 compare
OHPLBJKB_02496 -1.4 -2.0 Murein tetrapeptide carboxypeptidase compare
OHPLBJKB_02990 -1.4 -2.0 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
OHPLBJKB_04123 -1.3 -2.3 Cell division protein ZapB compare
OHPLBJKB_02475 -1.3 -2.0 Release factor glutamine methyltransferase compare
OHPLBJKB_04239 -1.3 -2.5 Tyrosine recombinase XerC compare
OHPLBJKB_02975 -1.3 -2.5 Protein TolR compare
OHPLBJKB_00298 -1.3 -2.7 Transcriptional regulatory protein OmpR compare
OHPLBJKB_02973 -1.3 -5.5 Protein TolB compare
OHPLBJKB_01650 -1.2 -1.7 putative low molecular weight protein-tyrosine-phosphatase AmsI compare
OHPLBJKB_01797 -1.2 -2.3 hypothetical protein compare
OHPLBJKB_02972 -1.2 -4.0 Peptidoglycan-associated lipoprotein compare
OHPLBJKB_04422 -1.2 -2.3 hypothetical protein compare
OHPLBJKB_02976 -1.2 -3.1 Protein TolQ compare
OHPLBJKB_00278 -1.2 -5.6 Aerobic glycerol-3-phosphate dehydrogenase compare
OHPLBJKB_01386 -1.1 -2.5 USG-1 protein compare
OHPLBJKB_02071 -1.1 -3.6 Glutaredoxin 4 compare
OHPLBJKB_01419 -1.1 -4.6 NADH-quinone oxidoreductase subunit B compare
OHPLBJKB_01426 -1.1 -1.9 NADH-quinone oxidoreductase subunit J compare
OHPLBJKB_03461 -1.1 -2.1 D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase compare
OHPLBJKB_01634 -1.1 -2.8 hypothetical protein compare
OHPLBJKB_00102 -1.1 -4.1 Mannitol-1-phosphate 5-dehydrogenase compare
OHPLBJKB_01428 -1.1 -4.0 NADH-quinone oxidoreductase subunit L compare
OHPLBJKB_00538 -1.1 -3.6 ATP-dependent RNA helicase DeaD compare
OHPLBJKB_02448 -1.0 -1.3 DNA-binding protein H-NS compare
OHPLBJKB_04135 -1.0 -3.9 ATP-dependent 6-phosphofructokinase isozyme 1 compare
OHPLBJKB_00878 -1.0 -2.0 hypothetical protein compare
OHPLBJKB_02928 -1.0 -2.3 Molybdopterin synthase catalytic subunit compare
OHPLBJKB_02974 -1.0 -3.6 Protein TolA compare
OHPLBJKB_01473 -0.9 -2.1 hypothetical protein compare
OHPLBJKB_04326 -0.9 -3.4 Phosphate transport system permease protein PstC compare
OHPLBJKB_01131 -0.9 -5.1 ATP-dependent RNA helicase SrmB compare
OHPLBJKB_01900 -0.9 -2.6 RNA chaperone ProQ compare
OHPLBJKB_00072 -0.9 -2.4 Lipopolysaccharide core heptose(I) kinase RfaP compare
OHPLBJKB_04363 -0.9 -2.2 IS66 family transposase ISCro1 compare
OHPLBJKB_02911 -0.9 -2.2 Multiple stress resistance protein BhsA compare
OHPLBJKB_01429 -0.9 -3.0 NADH-quinone oxidoreductase subunit M compare
OHPLBJKB_00807 -0.8 -2.8 Xaa-Pro aminopeptidase compare
OHPLBJKB_01593 -0.8 -0.9 hypothetical protein compare
OHPLBJKB_00366 -0.8 -2.5 Bacterioferritin-associated ferredoxin compare
OHPLBJKB_00563 -0.8 -2.1 PTS system sorbose-specific EIIB component compare
OHPLBJKB_01427 -0.8 -1.8 NADH-quinone oxidoreductase subunit K compare
OHPLBJKB_03117 -0.8 -2.1 Ferric enterobactin transport system permease protein FepG compare
OHPLBJKB_03885 -0.8 -3.5 Elongation factor P--(R)-beta-lysine ligase compare
OHPLBJKB_03809 -0.8 -2.0 Endoribonuclease toxin ChpB compare
OHPLBJKB_02457 -0.8 -1.8 Nitrate reductase molybdenum cofactor assembly chaperone NarJ compare
OHPLBJKB_02388 -0.8 -2.0 Peptide transport periplasmic protein SapA compare
OHPLBJKB_00882 -0.8 -1.4 hypothetical protein compare
OHPLBJKB_01135 -0.8 -1.4 Anti-sigma-E factor RseA compare
OHPLBJKB_01422 -0.8 -2.4 NADH-quinone oxidoreductase subunit F compare
OHPLBJKB_04433 -0.8 -1.6 hypothetical protein compare
OHPLBJKB_00471 -0.8 -1.7 Inner membrane protein YhcB compare
OHPLBJKB_01430 -0.8 -2.5 NADH-quinone oxidoreductase subunit N compare
OHPLBJKB_02215 -0.7 -2.0 Type 1 fimbrin D-mannose specific adhesin compare
OHPLBJKB_03896 -0.7 -3.9 L-lysine 2,3-aminomutase compare
OHPLBJKB_01648 -0.7 -3.9 hypothetical protein compare
OHPLBJKB_00809 -0.7 -2.0 2-octaprenylphenol hydroxylase compare
OHPLBJKB_00604 -0.7 -3.0 Putative L-lactate dehydrogenase operon regulatory protein compare
OHPLBJKB_00820 -0.7 -3.1 Flavodoxin 2 compare
OHPLBJKB_00192 -0.7 -1.0 Protein HdeD compare
OHPLBJKB_02212 -0.7 -1.8 Outer membrane usher protein FimD compare
OHPLBJKB_03383 -0.7 -1.7 hypothetical protein compare
OHPLBJKB_01541 -0.7 -2.8 Multiphosphoryl transfer protein compare
OHPLBJKB_01169 -0.7 -1.9 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit compare
OHPLBJKB_04001 -0.7 -1.9 Diacylglycerol kinase compare
OHPLBJKB_03089 -0.7 -2.3 Citrate lyase subunit beta compare
OHPLBJKB_01242 -0.7 -1.0 hypothetical protein compare
OHPLBJKB_04209 -0.7 -3.6 NAD(P)H-flavin reductase compare
OHPLBJKB_00078 -0.7 -1.4 O-antigen ligase compare
OHPLBJKB_01864 -0.7 -1.6 putative transcriptional regulatory protein YebC compare
OHPLBJKB_01641 -0.7 -1.2 dCTP deaminase compare
OHPLBJKB_02365 -0.7 -2.0 Beta-phosphoglucomutase compare
OHPLBJKB_01423 -0.7 -3.1 NADH-quinone oxidoreductase subunit G compare
OHPLBJKB_03030 -0.7 -2.9 putative protein YbfE compare
OHPLBJKB_04193 -0.6 -2.7 Thiol:disulfide interchange protein DsbA compare
OHPLBJKB_00762 -0.6 -2.9 dITP/XTP pyrophosphatase compare
OHPLBJKB_00147 -0.6 -2.4 IS3 family transposase IS150 compare
OHPLBJKB_00131 -0.6 -1.9 Hydrogenase-4 component A compare
OHPLBJKB_02107 -0.6 -1.4 7-alpha-hydroxysteroid dehydrogenase compare
OHPLBJKB_04354 -0.6 -1.1 Outer membrane protease OmpP compare
OHPLBJKB_02410 -0.6 -1.9 DNA topoisomerase 1 compare
OHPLBJKB_02701 -0.6 -1.7 putative protein YccU compare
OHPLBJKB_04211 -0.6 -1.2 Transcription antitermination protein RfaH compare
OHPLBJKB_00475 -0.6 -3.3 Stringent starvation protein A compare
OHPLBJKB_03588 -0.6 -1.1 Putative inhibitor of glucose uptake transporter SgrT compare
OHPLBJKB_02996 -0.6 -1.9 hypothetical protein compare
OHPLBJKB_01187 -0.6 -2.6 hypothetical protein compare
OHPLBJKB_04325 -0.6 -3.0 Phosphate-binding protein PstS compare
OHPLBJKB_01863 -0.6 -2.6 Dihydroneopterin triphosphate diphosphatase compare
OHPLBJKB_02224 -0.6 -1.3 Glutamate decarboxylase beta compare
OHPLBJKB_02991 -0.6 -1.5 2-oxoglutarate dehydrogenase E1 component compare
OHPLBJKB_00858 -0.6 -1.9 Surface presentation of antigens protein SpaR compare
OHPLBJKB_00536 -0.6 -3.1 Polyribonucleotide nucleotidyltransferase compare
OHPLBJKB_00744 -0.6 -0.7 hypothetical protein compare
OHPLBJKB_03310 -0.6 -2.5 hypothetical protein compare
OHPLBJKB_03341 -0.6 -1.8 hypothetical protein compare
OHPLBJKB_01779 -0.6 -1.1 hypothetical protein compare
OHPLBJKB_03606 -0.6 -2.2 Protein ApaG compare
OHPLBJKB_01907 -0.6 -1.0 Cold shock-like protein CspC compare
OHPLBJKB_02400 -0.6 -1.0 putative protein YciH compare
OHPLBJKB_04181 -0.6 -4.1 GTP-binding protein TypA/BipA compare
OHPLBJKB_01877 -0.6 -2.2 Glucose-6-phosphate 1-dehydrogenase compare
OHPLBJKB_01424 -0.6 -1.6 NADH-quinone oxidoreductase subunit H compare
OHPLBJKB_01284 -0.6 -2.0 Ethanolamine utilization protein EutK compare
OHPLBJKB_02127 -0.6 -1.1 Spermidine export protein MdtI compare
OHPLBJKB_03634 -0.6 -1.8 hypothetical protein compare
OHPLBJKB_00438 -0.6 -1.5 hypothetical protein compare
OHPLBJKB_00150 -0.6 -1.2 Cold shock protein CspA compare
OHPLBJKB_03223 -0.6 -1.4 Nitrogen regulatory protein P-II 2 compare
OHPLBJKB_00422 -0.6 -2.5 Shikimate dehydrogenase (NADP(+)) compare
OHPLBJKB_04237 -0.6 -3.6 DNA helicase II compare
OHPLBJKB_01894 -0.6 -1.2 hypothetical protein compare
OHPLBJKB_03579 -0.6 -2.7 Catabolite repressor/activator compare
OHPLBJKB_03605 -0.5 -1.8 Ribosomal RNA small subunit methyltransferase A compare
OHPLBJKB_01433 -0.5 -1.1 hypothetical protein compare
OHPLBJKB_02347 -0.5 -1.4 Methylated-DNA--protein-cysteine methyltransferase compare
OHPLBJKB_03830 -0.5 -2.5 HTH-type transcriptional repressor NicS compare
OHPLBJKB_02738 -0.5 -1.9 Aspartate aminotransferase compare
OHPLBJKB_00764 -0.5 -2.6 hypothetical protein compare
OHPLBJKB_01994 -0.5 -1.2 'PTS system N,N'-diacetylchitobiose-specific EIIB component' transl_table=11 compare
OHPLBJKB_04395 -0.5 -1.3 hypothetical protein compare
OHPLBJKB_00631 -0.5 -1.4 Transcriptional regulator YqjI compare
OHPLBJKB_00531 -0.5 -0.7 Transcription termination/antitermination protein NusA compare
OHPLBJKB_02411 -0.5 -1.4 Protein YciN compare
OHPLBJKB_00289 -0.5 -1.8 Fe/S biogenesis protein NfuA compare
OHPLBJKB_01185 -0.5 -1.4 Protein IscX compare
OHPLBJKB_00676 -0.5 -3.8 Sensor protein QseC compare
OHPLBJKB_01544 -0.5 -2.0 Pseudouridine kinase compare
OHPLBJKB_04120 -0.5 -1.8 ATP-dependent protease ATPase subunit HslU compare
OHPLBJKB_01380 -0.5 -1.6 hypothetical protein compare
OHPLBJKB_02363 -0.5 -2.2 Outer membrane protein G compare
OHPLBJKB_01420 -0.5 -1.8 NADH-quinone oxidoreductase subunit C/D compare
OHPLBJKB_01138 -0.5 -2.0 Elongation factor 4 compare
OHPLBJKB_03362 -0.5 -1.5 HTH-type transcriptional regulator BetI compare
OHPLBJKB_00771 -0.5 -1.9 Glutathione synthetase compare
OHPLBJKB_02395 -0.5 -2.4 Exoribonuclease 2 compare
OHPLBJKB_03536 -0.5 -2.7 Hypoxanthine phosphoribosyltransferase compare
OHPLBJKB_01276 -0.5 -2.3 Gamma-glutamyl phosphate reductase compare
OHPLBJKB_02431 -0.5 -1.2 Protein TonB compare
OHPLBJKB_04247 -0.5 -2.3 Adenylate cyclase compare
OHPLBJKB_00051 -0.5 -1.7 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
OHPLBJKB_00316 -0.5 -1.7 DNA adenine methylase compare
OHPLBJKB_02409 -0.5 -1.6 HTH-type transcriptional regulator CysB compare
OHPLBJKB_01978 -0.5 -2.3 Protein YnjB compare
OHPLBJKB_01506 -0.5 -1.9 Ferredoxin-type protein NapG compare
OHPLBJKB_01112 -0.5 -2.1 Ribosomal large subunit pseudouridine synthase D compare
OHPLBJKB_04314 -0.5 -1.4 ATP synthase protein I compare
OHPLBJKB_03668 -0.5 -1.3 Trp operon repressor compare
OHPLBJKB_03748 -0.5 -2.6 Protein FimG compare
OHPLBJKB_00660 -0.5 -2.3 putative fimbrial-like protein YbgD compare
OHPLBJKB_00314 -0.5 -2.0 3-dehydroquinate synthase compare
OHPLBJKB_02403 -0.5 -1.2 Lipopolysaccharide assembly protein A compare
OHPLBJKB_00168 -0.5 -1.2 Small toxic polypeptide LdrD compare
OHPLBJKB_00537 -0.5 -3.5 Lipoprotein NlpI compare
OHPLBJKB_01196 -0.5 -1.4 hypothetical protein compare
OHPLBJKB_01854 -0.5 -2.0 Copper homeostasis protein CutC compare
OHPLBJKB_00496 -0.5 -1.3 Nitrogen regulatory protein compare
OHPLBJKB_01583 -0.5 -0.7 hypothetical protein compare
OHPLBJKB_03186 -0.5 -1.4 Inner membrane protein YbbJ compare
OHPLBJKB_02155 -0.5 -1.0 hypothetical protein compare
OHPLBJKB_00236 -0.5 -1.5 hypothetical protein compare
OHPLBJKB_02835 -0.5 -1.3 hypothetical protein compare
OHPLBJKB_00420 -0.5 -2.3 DNA topoisomerase 1 compare
OHPLBJKB_00201 -0.5 -1.6 hypothetical protein compare
OHPLBJKB_03263 -0.5 -1.1 Transcriptional repressor NrdR compare
OHPLBJKB_01673 -0.5 -2.7 D-inositol-3-phosphate glycosyltransferase compare
OHPLBJKB_03637 -0.5 -1.2 Outer membrane usher protein YehB compare
OHPLBJKB_03413 -0.5 -0.6 Antitoxin DinJ compare
OHPLBJKB_02320 -0.5 -1.6 Putative 1,2-phenylacetyl-CoA epoxidase, subunit D compare
OHPLBJKB_04278 -0.5 -1.7 Peptidyl-prolyl cis-trans isomerase C compare


Specific Phenotypes

None in this experiment

For Escherichia coli HS(pFamp)R (ATCC 700891) in phage experiments