Experiment set1S384 for Escherichia coli HS(pFamp)R (ATCC 700891)

Compare to:

N4 MOI10

200 most important genes:

  gene name fitness t score description  
OHPLBJKB_01652 -4.5 -3.0 hypothetical protein compare
OHPLBJKB_01663 -2.6 -3.0 dTDP-4-dehydrorhamnose 3,5-epimerase compare
OHPLBJKB_03543 -2.5 -1.7 Aconitate hydratase B compare
OHPLBJKB_00821 -2.3 -4.3 Tyrosine recombinase XerD compare
OHPLBJKB_00519 -2.1 -2.1 Transcription elongation factor GreA compare
OHPLBJKB_04204 -2.0 -4.4 Trk system potassium uptake protein TrkH compare
OHPLBJKB_01653 -1.9 -1.5 hypothetical protein compare
OHPLBJKB_01135 -1.9 -2.2 Anti-sigma-E factor RseA compare
OHPLBJKB_02778 -1.9 -2.2 DNA translocase FtsK compare
OHPLBJKB_01665 -1.8 -3.0 IS1 family transposase IS1X2 compare
OHPLBJKB_03796 -1.8 -1.7 Trehalose-6-phosphate hydrolase compare
OHPLBJKB_01035 -1.7 -3.0 Protein RecA compare
OHPLBJKB_03865 -1.7 -2.9 Adenylosuccinate synthetase compare
OHPLBJKB_01418 -1.6 -2.0 NAD(P)H-quinone oxidoreductase subunit 3 compare
OHPLBJKB_00908 -1.6 -3.0 RecBCD enzyme subunit RecC compare
OHPLBJKB_04088 -1.6 -2.7 Soluble pyridine nucleotide transhydrogenase compare
OHPLBJKB_02496 -1.6 -1.9 Murein tetrapeptide carboxypeptidase compare
OHPLBJKB_02578 -1.6 -3.1 Large ribosomal RNA subunit accumulation protein YceD compare
OHPLBJKB_02767 -1.6 -1.6 Glutathione-regulated potassium-efflux system ancillary protein KefG compare
OHPLBJKB_04368 -1.6 -2.6 hypothetical protein compare
OHPLBJKB_03501 -1.5 -2.7 Periplasmic serine endoprotease DegP compare
OHPLBJKB_04217 -1.5 -2.7 hypothetical protein compare
OHPLBJKB_01662 -1.5 -2.6 dTDP-4-dehydrorhamnose reductase compare
OHPLBJKB_04235 -1.4 -2.5 Magnesium transport protein CorA compare
OHPLBJKB_01430 -1.4 -4.0 NADH-quinone oxidoreductase subunit N compare
OHPLBJKB_04276 -1.4 -2.1 ATP-dependent DNA helicase Rep compare
OHPLBJKB_01427 -1.4 -3.0 NADH-quinone oxidoreductase subunit K compare
OHPLBJKB_02972 -1.4 -4.2 Peptidoglycan-associated lipoprotein compare
OHPLBJKB_00278 -1.3 -6.1 Aerobic glycerol-3-phosphate dehydrogenase compare
OHPLBJKB_00498 -1.3 -1.4 RNA polymerase sigma-54 factor compare
OHPLBJKB_01566 -1.3 -1.8 hypothetical protein compare
OHPLBJKB_03607 -1.2 -4.7 'Bis(5'-nucleosyl)-tetraphosphatase, symmetrical' transl_table=11 compare
OHPLBJKB_02877 -1.2 -2.2 hypothetical protein compare
OHPLBJKB_02990 -1.2 -2.1 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
OHPLBJKB_01616 -1.1 -1.7 PTS system galactitol-specific EIIA component compare
OHPLBJKB_03263 -1.1 -1.5 Transcriptional repressor NrdR compare
OHPLBJKB_01799 -1.1 -2.2 Putative sulfur carrier protein YedF compare
OHPLBJKB_01138 -1.1 -3.6 Elongation factor 4 compare
OHPLBJKB_03896 -1.0 -4.9 L-lysine 2,3-aminomutase compare
OHPLBJKB_00471 -1.0 -2.1 Inner membrane protein YhcB compare
OHPLBJKB_01131 -1.0 -5.6 ATP-dependent RNA helicase SrmB compare
OHPLBJKB_02457 -1.0 -2.3 Nitrate reductase molybdenum cofactor assembly chaperone NarJ compare
OHPLBJKB_01218 -0.9 -1.9 hypothetical protein compare
OHPLBJKB_01191 -0.9 -2.1 Nucleoside diphosphate kinase compare
OHPLBJKB_01424 -0.9 -2.5 NADH-quinone oxidoreductase subunit H compare
OHPLBJKB_00422 -0.9 -3.8 Shikimate dehydrogenase (NADP(+)) compare
OHPLBJKB_00591 -0.9 -1.4 hypothetical protein compare
OHPLBJKB_01426 -0.9 -1.6 NADH-quinone oxidoreductase subunit J compare
OHPLBJKB_03885 -0.9 -3.7 Elongation factor P--(R)-beta-lysine ligase compare
OHPLBJKB_02347 -0.9 -2.5 Methylated-DNA--protein-cysteine methyltransferase compare
OHPLBJKB_02991 -0.9 -2.1 2-oxoglutarate dehydrogenase E1 component compare
OHPLBJKB_00314 -0.9 -3.3 3-dehydroquinate synthase compare
OHPLBJKB_01358 -0.9 -1.8 tRNA-Arg compare
OHPLBJKB_00298 -0.9 -2.3 Transcriptional regulatory protein OmpR compare
OHPLBJKB_01087 -0.9 -2.4 SsrA-binding protein compare
OHPLBJKB_00102 -0.8 -3.2 Mannitol-1-phosphate 5-dehydrogenase compare
OHPLBJKB_00104 -0.8 -2.5 Inner membrane protein YiaW compare
OHPLBJKB_00865 -0.8 -2.0 hypothetical protein compare
OHPLBJKB_00956 -0.8 -1.4 putative protein YqcG compare
OHPLBJKB_01425 -0.8 -1.5 NADH-quinone oxidoreductase subunit I compare
OHPLBJKB_01790 -0.8 -1.8 Flagellar motor switch protein FliG compare
OHPLBJKB_01078 -0.8 -2.5 hypothetical protein compare
OHPLBJKB_02974 -0.8 -3.1 Protein TolA compare
OHPLBJKB_02856 -0.8 -1.3 hypothetical protein compare
OHPLBJKB_02973 -0.8 -3.8 Protein TolB compare
OHPLBJKB_00496 -0.8 -2.0 Nitrogen regulatory protein compare
OHPLBJKB_03129 -0.8 -2.1 hypothetical protein compare
OHPLBJKB_00818 -0.8 -1.2 FAD assembly factor SdhE compare
OHPLBJKB_04327 -0.8 -2.2 Phosphate transport system permease protein PstA compare
OHPLBJKB_04239 -0.7 -1.6 Tyrosine recombinase XerC compare
OHPLBJKB_00210 -0.7 -2.6 Low-affinity inorganic phosphate transporter 1 compare
OHPLBJKB_00110 -0.7 -1.7 Protein RhsC compare
OHPLBJKB_04193 -0.7 -2.9 Thiol:disulfide interchange protein DsbA compare
OHPLBJKB_02448 -0.7 -1.2 DNA-binding protein H-NS compare
OHPLBJKB_00075 -0.7 -1.7 Lipopolysaccharide core heptose(II) kinase RfaY compare
OHPLBJKB_02411 -0.7 -2.1 Protein YciN compare
OHPLBJKB_03605 -0.7 -2.2 Ribosomal RNA small subunit methyltransferase A compare
OHPLBJKB_04314 -0.7 -1.9 ATP synthase protein I compare
OHPLBJKB_01583 -0.7 -1.3 hypothetical protein compare
OHPLBJKB_02504 -0.7 -2.9 Disulfide bond formation protein B compare
OHPLBJKB_02780 -0.7 -1.2 Thioredoxin reductase compare
OHPLBJKB_01428 -0.7 -2.8 NADH-quinone oxidoreductase subunit L compare
OHPLBJKB_03642 -0.7 -3.4 Na(+)/H(+) antiporter NhaA compare
OHPLBJKB_04326 -0.7 -2.4 Phosphate transport system permease protein PstC compare
OHPLBJKB_00872 -0.7 -1.4 hypothetical protein compare
OHPLBJKB_01432 -0.7 -1.5 hypothetical protein compare
OHPLBJKB_03014 -0.7 -1.8 hypothetical protein compare
OHPLBJKB_02410 -0.7 -2.1 DNA topoisomerase 1 compare
OHPLBJKB_03752 -0.7 -2.4 putative major fimbrial subunit LpfA compare
OHPLBJKB_03410 -0.6 -1.3 hypothetical protein compare
OHPLBJKB_03118 -0.6 -1.3 Ferric enterobactin transport ATP-binding protein FepC compare
OHPLBJKB_00475 -0.6 -3.3 Stringent starvation protein A compare
OHPLBJKB_02047 -0.6 -1.2 Major outer membrane prolipoprotein Lpp compare
OHPLBJKB_00538 -0.6 -2.7 ATP-dependent RNA helicase DeaD compare
OHPLBJKB_01605 -0.6 -1.4 Transcriptional repressor RcnR compare
OHPLBJKB_04237 -0.6 -4.0 DNA helicase II compare
OHPLBJKB_02738 -0.6 -2.2 Aspartate aminotransferase compare
OHPLBJKB_03341 -0.6 -2.2 hypothetical protein compare
OHPLBJKB_03172 -0.6 -1.8 Hydroxypyruvate isomerase compare
OHPLBJKB_02409 -0.6 -1.9 HTH-type transcriptional regulator CysB compare
OHPLBJKB_00077 -0.6 -1.3 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase compare
OHPLBJKB_00217 -0.6 -1.4 ISAs1 family transposase ISEc1 compare
OHPLBJKB_04209 -0.6 -3.2 NAD(P)H-flavin reductase compare
OHPLBJKB_02031 -0.6 -1.5 3-dehydroquinate dehydratase compare
OHPLBJKB_00536 -0.6 -3.3 Polyribonucleotide nucleotidyltransferase compare
OHPLBJKB_04247 -0.6 -2.8 Adenylate cyclase compare
OHPLBJKB_04325 -0.6 -2.7 Phosphate-binding protein PstS compare
OHPLBJKB_00583 -0.6 -2.8 L-threonine dehydratase catabolic TdcB compare
OHPLBJKB_01201 -0.6 -1.9 'Inosine-5'-monophosphate dehydrogenase' transl_table=11 compare
OHPLBJKB_03233 -0.6 -2.7 DNA-binding protein HU-beta compare
OHPLBJKB_03408 -0.6 -2.9 Chemotaxis protein LafU compare
OHPLBJKB_02590 -0.6 -1.3 Basal-body rod modification protein FlgD compare
OHPLBJKB_02378 -0.6 -1.9 Phage shock protein A compare
OHPLBJKB_03236 -0.6 -2.9 ATP-dependent Clp protease proteolytic subunit compare
OHPLBJKB_02516 -0.6 -1.1 Septum site-determining protein MinD compare
OHPLBJKB_04427 -0.6 -0.8 hypothetical protein compare
OHPLBJKB_03725 -0.6 -1.7 hypothetical protein compare
OHPLBJKB_02493 -0.6 -1.1 hypothetical protein compare
OHPLBJKB_01541 -0.6 -2.4 Multiphosphoryl transfer protein compare
OHPLBJKB_03089 -0.6 -1.3 Citrate lyase subunit beta compare
OHPLBJKB_02153 -0.6 -1.1 HTH-type transcriptional regulator GadW compare
OHPLBJKB_02400 -0.6 -1.0 putative protein YciH compare
OHPLBJKB_01645 -0.6 -0.9 hypothetical protein compare
OHPLBJKB_00520 -0.6 -1.7 RNA-binding protein YhbY compare
OHPLBJKB_00168 -0.5 -1.5 Small toxic polypeptide LdrD compare
OHPLBJKB_01112 -0.5 -2.3 Ribosomal large subunit pseudouridine synthase D compare
OHPLBJKB_03579 -0.5 -2.7 Catabolite repressor/activator compare
OHPLBJKB_01420 -0.5 -1.8 NADH-quinone oxidoreductase subunit C/D compare
OHPLBJKB_01349 -0.5 -2.6 hypothetical protein compare
OHPLBJKB_01756 -0.5 -0.8 Metal-binding protein ZinT compare
OHPLBJKB_03234 -0.5 -2.4 Lon protease compare
OHPLBJKB_01599 -0.5 -1.3 putative fimbrial-like protein YehD compare
OHPLBJKB_02831 -0.5 -2.8 hypothetical protein compare
OHPLBJKB_02976 -0.5 -1.6 Protein TolQ compare
OHPLBJKB_03777 -0.5 -2.7 DNA polymerase III subunit chi compare
OHPLBJKB_00572 -0.5 -2.9 Glucitol operon repressor compare
OHPLBJKB_00339 -0.5 -2.2 Peptidyl-prolyl cis-trans isomerase A compare
OHPLBJKB_04135 -0.5 -2.1 ATP-dependent 6-phosphofructokinase isozyme 1 compare
OHPLBJKB_02850 -0.5 -1.1 hypothetical protein compare
OHPLBJKB_02397 -0.5 -1.7 hypothetical protein compare
OHPLBJKB_00764 -0.5 -2.4 hypothetical protein compare
OHPLBJKB_02995 -0.5 -1.4 Succinate dehydrogenase cytochrome b556 subunit compare
OHPLBJKB_00117 -0.5 -1.2 Inner membrane protein YiaW compare
OHPLBJKB_04361 -0.5 -1.7 hypothetical protein compare
OHPLBJKB_02388 -0.5 -1.3 Peptide transport periplasmic protein SapA compare
OHPLBJKB_03038 -0.5 -2.8 N-acetylglucosamine-6-phosphate deacetylase compare
OHPLBJKB_01417 -0.5 -0.8 hypothetical protein compare
OHPLBJKB_01422 -0.5 -1.6 NADH-quinone oxidoreductase subunit F compare
OHPLBJKB_03122 -0.5 -2.3 Enterochelin esterase compare
OHPLBJKB_01429 -0.5 -1.8 NADH-quinone oxidoreductase subunit M compare
OHPLBJKB_04384 -0.5 -2.9 Lipoprotein YlpA compare
OHPLBJKB_00198 -0.5 -2.0 hypothetical protein compare
OHPLBJKB_01702 -0.5 -1.6 hypothetical protein compare
OHPLBJKB_02514 -0.5 -1.6 hypothetical protein compare
OHPLBJKB_03383 -0.5 -1.0 hypothetical protein compare
OHPLBJKB_02835 -0.5 -0.8 hypothetical protein compare
OHPLBJKB_04234 -0.5 -1.9 hypothetical protein compare
OHPLBJKB_02277 -0.5 -2.3 Antitoxin HicB compare
OHPLBJKB_01797 -0.5 -1.3 hypothetical protein compare
OHPLBJKB_00017 -0.5 -2.2 Small heat shock protein IbpB compare
OHPLBJKB_00800 -0.5 -2.0 HTH-type transcriptional regulator ArgP compare
OHPLBJKB_01423 -0.5 -2.3 NADH-quinone oxidoreductase subunit G compare
OHPLBJKB_01639 -0.5 -1.4 putative diguanylate cyclase DgcE compare
OHPLBJKB_03270 -0.5 -2.3 Queuine tRNA-ribosyltransferase compare
OHPLBJKB_02536 -0.5 -1.7 High frequency lysogenization protein HflD compare
OHPLBJKB_04360 -0.5 -2.2 hypothetical protein compare
OHPLBJKB_01647 -0.5 -1.1 IS1 family transposase IS1X4 compare
OHPLBJKB_02290 -0.5 -1.4 hypothetical protein compare
OHPLBJKB_03413 -0.5 -0.6 Antitoxin DinJ compare
OHPLBJKB_02247 -0.5 -1.4 hypothetical protein compare
OHPLBJKB_01955 -0.5 -1.6 hypothetical protein compare
OHPLBJKB_03994 -0.5 -2.6 tRNA-dihydrouridine(20/20a) synthase compare
OHPLBJKB_03030 -0.4 -2.1 putative protein YbfE compare
OHPLBJKB_01045 -0.4 -3.3 Glutamate--cysteine ligase compare
OHPLBJKB_04001 -0.4 -1.2 Diacylglycerol kinase compare
OHPLBJKB_02844 -0.4 -1.9 hypothetical protein compare
OHPLBJKB_01260 -0.4 -1.6 Protein YffB compare
OHPLBJKB_01075 -0.4 -0.7 tRNA-Met compare
OHPLBJKB_04008 -0.4 -1.4 hypothetical protein compare
OHPLBJKB_03882 -0.4 -1.3 Phosphatidylserine decarboxylase proenzyme compare
OHPLBJKB_01801 -0.4 -1.0 hypothetical protein compare
OHPLBJKB_01220 -0.4 -1.6 hypothetical protein compare
OHPLBJKB_03683 -0.4 -1.8 putative metal-dependent hydrolase YjjV compare
OHPLBJKB_04128 -0.4 -2.3 Universal stress protein D compare
OHPLBJKB_03143 -0.4 -1.8 hypothetical protein compare
OHPLBJKB_02308 -0.4 -2.3 Pyridoxine 4-dehydrogenase compare
OHPLBJKB_02083 -0.4 -1.1 Transcriptional regulator SlyA compare
OHPLBJKB_02362 -0.4 -1.4 HTH-type transcriptional repressor PurR compare
OHPLBJKB_01661 -0.4 -2.0 Glucose-1-phosphate thymidylyltransferase 2 compare
OHPLBJKB_03032 -0.4 -0.9 Ferric uptake regulation protein compare
OHPLBJKB_01535 -0.4 -1.7 Lipid A 1-diphosphate synthase compare
OHPLBJKB_01027 -0.4 -3.0 Glucitol operon repressor compare
OHPLBJKB_04181 -0.4 -3.1 GTP-binding protein TypA/BipA compare
OHPLBJKB_02857 -0.4 -1.3 hypothetical protein compare
OHPLBJKB_03811 -0.4 -2.5 Gamma-glutamylcyclotransferase family protein YtfP compare
OHPLBJKB_01936 -0.4 -1.1 putative protein YeaR compare
OHPLBJKB_01910 -0.4 -1.4 hypothetical protein compare
OHPLBJKB_00010 -0.4 -1.7 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
OHPLBJKB_02094 -0.4 -0.9 Electron transport complex subunit RsxE compare
OHPLBJKB_01366 -0.4 -1.2 Phosphohistidine phosphatase SixA compare


Specific Phenotypes

None in this experiment

For Escherichia coli HS(pFamp)R (ATCC 700891) in phage experiments