Experiment set1S366 for Klebsiella pneumoniae MKP103
KP19_E3_R2_1_S_Rep2
Group: phageMedia: LB
Culturing: AMD9036_Kpneumoniae_MKP103_ML4, 48 well microplate, Aerobic, at 37C (C), shaken=double orbital, continuous, 200rpm
By: Hemaa on 07/10/2025
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Specific Phenotypes
For 6 genes in this experiment
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Lipid A-Ara4N pathway ( Polymyxin resistance ) | 2 |
| ATP-dependent RNA helicases, bacterial | 1 |
| Coenzyme A Biosynthesis | 1 |
| Rrf2 family transcriptional regulators | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Nucleotide sugars metabolism
- Fructose and mannose metabolism
- Ascorbate and aldarate metabolism
- C21-Steroid hormone metabolism
- Glycine, serine and threonine metabolism
- Methionine metabolism
- Lysine biosynthesis
- Lysine degradation
- Arginine and proline metabolism
- Bisphenol A degradation
- Aminophosphonate metabolism
- Polyketide sugar unit biosynthesis
- Aminosugars metabolism
- Lipopolysaccharide biosynthesis
- Linoleic acid metabolism
- Tetrachloroethene degradation
- Benzoate degradation via CoA ligation
- Butanoate metabolism
- Pantothenate and CoA biosynthesis
- Retinol metabolism
- Caprolactam degradation
- Alkaloid biosynthesis I
- Insect hormone biosynthesis
- Biosynthesis of unsaturated fatty acids
- Biosynthesis of type II polyketide products
- Biosynthesis of alkaloids derived from shikimate pathway
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| polymyxin resistance | 6 | 5 | 4 |
| phosphopantothenate biosynthesis I | 4 | 4 | 1 |
| phosphopantothenate biosynthesis III (archaea) | 4 | 2 | 1 |
| superpathway of coenzyme A biosynthesis I (bacteria) | 9 | 9 | 1 |
| superpathway of coenzyme A biosynthesis II (plants) | 10 | 5 | 1 |