Experiment set1S351 for Bacteroides ovatus ATCC 8483

Compare to:

D-Xylose 10 mM carbon source

200 most important genes:

  gene name fitness t score description  
BACOVA_03590 -6.0 -10.1 putative argininosuccinate synthase compare
BACOVA_01232 -6.0 -7.2 histidinol-phosphatase compare
BACOVA_01910 -6.0 -9.2 acetylglutamate kinase compare
BACOVA_01159 -5.9 -12.0 putative prephenate dehydrogenase compare
BACOVA_04600 -5.8 -12.5 3-isopropylmalate dehydrogenase compare
BACOVA_03588 -5.8 -11.1 aminotransferase, class III compare
BACOVA_04603 -5.7 -9.6 3-isopropylmalate dehydratase, large subunit compare
BACOVA_03785 -5.6 -6.7 tryptophan synthase, alpha subunit compare
BACOVA_02122 -5.4 -8.7 3-dehydroquinate dehydratase, type II compare
BACOVA_00220 -5.4 -5.2 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
BACOVA_01235 -5.4 -8.9 ATP phosphoribosyltransferase compare
BACOVA_00219 -5.4 -8.2 imidazoleglycerol phosphate synthase, cyclase subunit compare
BACOVA_00222 -5.3 -9.6 formyltetrahydrofolate deformylase compare
BACOVA_03303 -5.3 -10.2 acetolactate synthase, large subunit, biosynthetic type compare
BACOVA_03847 -5.3 -11.8 Na+/H+ antiporter family protein compare
BACOVA_03591 -5.2 -8.8 hypothetical protein compare
BACOVA_03534 -5.2 -9.4 glutamate-5-semialdehyde dehydrogenase compare
BACOVA_03551 -5.2 -17.4 argininosuccinate lyase compare
BACOVA_03302 -5.2 -12.2 dihydroxy-acid dehydratase compare
BACOVA_03306 -5.2 -8.7 ketol-acid reductoisomerase compare
BACOVA_01233 -5.1 -7.1 histidinol-phosphate transaminase compare
BACOVA_03537 -5.1 -10.5 glutamate 5-kinase compare
BACOVA_03533 -5.1 -9.9 N-acetylornithine carbamoyltransferase compare
BACOVA_03023 -5.1 -17.3 threonine synthase compare
BACOVA_01234 -5.1 -14.4 histidinol dehydrogenase compare
BACOVA_03022 -5.1 -16.7 putative homoserine kinase compare
BACOVA_01953 -5.1 -12.7 4-phosphoerythronate dehydrogenase compare
BACOVA_00215 -5.1 -7.7 diaminopimelate decarboxylase compare
BACOVA_04604 -5.1 -13.8 2-isopropylmalate synthase compare
BACOVA_04207 -5.0 -6.9 aminotransferase, class I/II compare
BACOVA_01348 -5.0 -3.5 phosphoribosylamine--glycine ligase compare
BACOVA_04462 -5.0 -19.2 putative phosphoribosylformylglycinamidine synthase compare
BACOVA_03304 -5.0 -10.6 acetolactate synthase, small subunit compare
BACOVA_01162 -5.0 -8.9 prephenate dehydratase compare
BACOVA_04601 -4.9 -13.9 LeuA allosteric (dimerization) domain protein compare
BACOVA_04602 -4.9 -7.5 3-isopropylmalate dehydratase, small subunit compare
BACOVA_03587 -4.9 -9.8 pyrroline-5-carboxylate reductase compare
BACOVA_03358 -4.8 -6.6 peptidase dimerization domain protein compare
BACOVA_03005 -4.8 -12.5 aminotransferase, class I/II compare
BACOVA_04589 -4.8 -9.2 adenylosuccinate synthase compare
BACOVA_01959 -4.8 -15.0 GH3 auxin-responsive promoter compare
BACOVA_03021 -4.8 -19.4 homoserine dehydrogenase compare
BACOVA_02534 -4.7 -7.9 xylose isomerase compare
BACOVA_01161 -4.6 -11.2 aminotransferase, class I/II compare
BACOVA_00218 -4.6 -10.7 phosphoribosyl-ATP diphosphatase compare
BACOVA_03589 -4.6 -11.1 N-acetyl-gamma-glutamyl-phosphate reductase compare
BACOVA_02533 -4.5 -9.2 carbohydrate kinase, FGGY family protein compare
BACOVA_03781 -4.5 -6.9 glutamine amidotransferase, class I compare
BACOVA_03782 -4.5 -13.8 anthranilate phosphoribosyltransferase compare
BACOVA_03779 -4.4 -11.7 tryptophan synthase, beta subunit compare
BACOVA_03780 -4.4 -10.6 chorismate binding enzyme compare
BACOVA_01236 -4.2 -5.4 hypothetical protein compare
BACOVA_03783 -4.2 -9.0 indole-3-glycerol phosphate synthase compare
BACOVA_03784 -4.2 -10.5 N-(5'phosphoribosyl)anthranilate isomerase compare
BACOVA_01160 -4.1 -2.8 putative 3-deoxy-7-phosphoheptulonate synthase compare
BACOVA_02200 -4.0 -2.7 transcriptional regulator, AsnC family compare
BACOVA_04029 -3.9 -9.8 phosphoserine transaminase compare
BACOVA_00221 -3.9 -7.9 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit compare
BACOVA_05058 -3.9 -6.0 hypothetical protein compare
BACOVA_01713 -3.7 -2.6 hydrolase, NUDIX family compare
BACOVA_04344 -3.7 -5.1 tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein compare
BACOVA_02446 -3.7 -10.9 glycine hydroxymethyltransferase compare
BACOVA_04030 -3.7 -7.0 4-phosphoerythronate dehydrogenase compare
BACOVA_03182 -3.6 -4.0 transcriptional regulator, MarR family compare
BACOVA_03296 -3.5 -2.4 chorismate synthase compare
BACOVA_00723 -3.4 -11.8 tetratricopeptide repeat protein compare
BACOVA_01915 -3.3 -3.7 shikimate kinase compare
BACOVA_02241 -3.3 -3.2 electron transport complex, RnfABCDGE type, A subunit compare
BACOVA_02535 -3.3 -12.2 MFS transporter, SP family conserved
BACOVA_01621 -3.2 -18.3 phosphoribulokinase/uridine kinase family protein compare
BACOVA_01561 -3.2 -5.1 zinc finger/helix-turn-helix protein, YgiT family compare
BACOVA_04637 -3.1 -9.4 phospholipase D domain protein compare
BACOVA_01944 -3.1 -7.2 LICD family protein compare
BACOVA_01921 -3.1 -12.8 glycosyltransferase, group 2 family protein compare
BACOVA_01922 -3.0 -10.1 polysaccharide deacetylase compare
BACOVA_03225 -3.0 -11.7 aspartate--ammonia ligase compare
BACOVA_00216 -3.0 -12.9 amino acid kinase family compare
BACOVA_02421 -3.0 -13.8 ATP synthase F1, gamma subunit compare
BACOVA_02893 -3.0 -4.1 succinate CoA transferase compare
BACOVA_05341 -3.0 -7.7 phosphorylase family compare
BACOVA_05119 -3.0 -12.2 hypothetical protein compare
BACOVA_04599 -3.0 -1.9 hypothetical protein compare
BACOVA_04797 -2.8 -3.8 hypothetical protein compare
BACOVA_00591 -2.8 -13.9 PhoH family protein compare
BACOVA_02839 -2.8 -14.3 quinolinate synthetase complex, A subunit compare
BACOVA_01142 -2.8 -5.5 pyridoxine 5'-phosphate synthase compare
BACOVA_04303 -2.8 -4.6 nicotinate-nucleotide diphosphorylase (carboxylating) compare
BACOVA_05153 -2.8 -3.8 glutamate--ammonia ligase, catalytic domain protein compare
BACOVA_02888 -2.8 -16.2 L-aspartate oxidase compare
BACOVA_00959 -2.8 -4.4 dihydrodipicolinate reductase compare
BACOVA_02352 -2.8 -3.2 DNA-binding helix-turn-helix protein compare
BACOVA_02239 -2.7 -4.8 electron transport complex, RnfABCDGE type, G subunit compare
BACOVA_02238 -2.7 -6.9 electron transport complex, RnfABCDGE type, D subunit compare
BACOVA_01918 -2.7 -13.5 putative dolichyl-phosphate-mannose-protein mannosyltransferase compare
BACOVA_03523 -2.7 -5.4 translation elongation factor P compare
BACOVA_02085 -2.7 -5.9 2-oxoacid:acceptor oxidoreductase, alpha subunit compare
BACOVA_01942 -2.6 -5.2 putative histidinol-phosphate transaminase compare
BACOVA_01920 -2.6 -7.0 GtrA-like protein compare
BACOVA_02249 -2.5 -6.2 DNA-binding regulatory protein, YebC/PmpR family compare
BACOVA_02726 -2.5 -9.3 NAD dependent epimerase/dehydratase family protein compare
BACOVA_00353 -2.5 -14.6 carbamoyl-phosphate synthase, large subunit compare
BACOVA_02237 -2.4 -4.8 electron transport complex, RnfABCDGE type, C subunit compare
BACOVA_04757 -2.4 -1.6 hypothetical protein compare
BACOVA_02736 -2.3 -11.5 ribonuclease R compare
BACOVA_00690 -2.3 -5.5 diaminopimelate dehydrogenase compare
BACOVA_02725 -2.3 -9.0 PAP2 family protein compare
BACOVA_02434 -2.2 -7.3 NAD dependent epimerase/dehydratase family protein compare
BACOVA_01350 -2.2 -5.5 hypothetical protein compare
BACOVA_04060 -2.2 -4.8 acetyltransferase, GNAT family compare
BACOVA_02268 -2.2 -12.3 pyruvate, phosphate dikinase compare
BACOVA_00667 -2.2 -10.9 phospholipase D domain protein compare
BACOVA_02086 -2.2 -5.2 thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein compare
BACOVA_02853 -2.2 -7.5 radical SAM domain protein compare
BACOVA_05118 -2.2 -5.8 ABC transporter, ATP-binding protein compare
BACOVA_05132 -2.1 -15.4 nucleoside transporter compare
BACOVA_03148 -2.1 -2.8 hypothetical protein compare
BACOVA_04333 -2.1 -1.9 hypothetical protein compare
BACOVA_01083 -2.0 -8.8 mannose-1-phosphate guanylyltransferase compare
BACOVA_01635 -2.0 -10.9 butyrate kinase compare
BACOVA_03305 -2.0 -4.6 Acyl-ACP thioesterase compare
BACOVA_01349 -2.0 -7.9 peptidase, S9A/B/C family, catalytic domain protein compare
BACOVA_00094 -2.0 -10.7 NAD(P)-specific glutamate dehydrogenase compare
BACOVA_02361 -1.9 -2.7 thiamine biosynthesis protein ThiS compare
BACOVA_01116 -1.9 -5.4 ATP-binding protein, Mrp/Nbp35 family compare
BACOVA_03846 -1.9 -8.2 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein compare
BACOVA_03592 -1.9 -3.9 arginine repressor, C-terminal domain protein compare
BACOVA_01367 -1.9 -4.7 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA compare
BACOVA_01772 -1.8 -4.6 hypothetical protein compare
BACOVA_03620 -1.8 -7.5 transcriptional regulator, TetR family compare
BACOVA_02571 -1.8 -3.8 endopeptidase La compare
BACOVA_05365 -1.8 -9.0 hypothetical protein compare
BACOVA_01911 -1.7 -8.0 arginine 2-monooxygenase compare
BACOVA_02234 -1.7 -4.2 positive regulator of sigma(E), RseC/MucC compare
BACOVA_05463 -1.7 -3.6 hypothetical protein compare
BACOVA_04085 -1.7 -2.0 hypothetical protein compare
BACOVA_02236 -1.7 -4.5 electron transport complex, RnfABCDGE type, B subunit compare
BACOVA_05044 -1.7 -13.4 hypothetical protein compare
BACOVA_03778 -1.7 -1.8 hypothetical protein compare
BACOVA_05050 -1.7 -5.3 tRNA dimethylallyltransferase compare
BACOVA_01150 -1.6 -5.0 helicase C-terminal domain protein compare
BACOVA_01634 -1.6 -6.8 phosphate acetyl/butyryl transferase compare
BACOVA_01660 -1.6 -3.3 cytidine and deoxycytidylate deaminase zinc-binding region compare
BACOVA_02938 -1.6 -7.0 purine nucleoside phosphorylase I, inosine and guanosine-specific compare
BACOVA_02258 -1.6 -4.4 GTP-binding protein LepA compare
BACOVA_01919 -1.6 -10.3 arylsulfatase compare
BACOVA_00095 -1.5 -2.3 hypothetical protein compare
BACOVA_05101 -1.5 -6.0 putative membrane protein, MarC family compare
BACOVA_03586 -1.5 -4.3 cupin domain protein compare
BACOVA_02357 -1.5 -7.8 thiazole biosynthesis protein ThiH compare
BACOVA_05338 -1.5 -6.3 tRNA modification GTPase TrmE compare
BACOVA_04598 -1.5 -9.4 PAP2 family protein compare
BACOVA_05551 -1.5 -6.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase compare
BACOVA_02185 -1.5 -2.3 methionine--tRNA ligase compare
BACOVA_02593 -1.4 -5.4 hypothetical protein compare
BACOVA_04687 -1.4 -6.7 resolvase, N-terminal domain protein compare
BACOVA_02720 -1.4 -1.6 hypothetical protein compare
BACOVA_02500 -1.4 -6.3 hypothetical protein compare
BACOVA_04597 -1.4 -8.4 arylsulfatase compare
BACOVA_02356 -1.4 -6.4 ThiF family protein compare
BACOVA_01357 -1.4 -2.3 DNA-directed DNA polymerase compare
BACOVA_01050 -1.4 -1.7 site-specific recombinase, phage integrase family/ribosomal subunit interface protein compare
BACOVA_05067 -1.4 -4.8 ubiquinone/menaquinone biosynthesis methyltransferase compare
BACOVA_02415 -1.3 -4.9 hypothetical protein compare
BACOVA_04490 -1.3 -8.7 pyruvate synthase compare
BACOVA_01113 -1.3 -7.4 branched-chain-amino-acid transaminase compare
BACOVA_02417 -1.3 -5.3 ATP synthase F0, C subunit compare
BACOVA_04259 -1.3 -3.9 hypothetical protein compare
BACOVA_02359 -1.3 -4.0 thiazole biosynthesis protein ThiG compare
BACOVA_02360 -1.3 -4.0 thiamine-phosphate diphosphorylase compare
BACOVA_05538 -1.3 -3.2 Smr domain protein compare
BACOVA_03193 -1.3 -4.4 tRNA methylthiotransferase YqeV compare
BACOVA_03652 -1.3 -4.7 hypothetical protein compare
BACOVA_01356 -1.3 -3.2 hypothetical protein compare
BACOVA_00762 -1.2 -2.1 hypothetical protein compare
BACOVA_02499 -1.2 -6.1 chorismate binding enzyme compare
BACOVA_02355 -1.2 -5.7 thiamine monophosphate synthase/TENI compare
BACOVA_03364 -1.2 -5.5 adenylate cyclase compare
BACOVA_00721 -1.2 -1.8 ATPase family associated with various cellular activities (AAA) compare
BACOVA_04593 -1.2 -4.6 transcriptional regulator, AraC family compare
BACOVA_01980 -1.2 -7.4 hypothetical protein compare
BACOVA_00642 -1.2 -2.2 TonB-dependent receptor compare
BACOVA_02435 -1.2 -1.4 hypothetical protein compare
BACOVA_02413 -1.2 -8.4 ATP synthase F1, beta subunit compare
BACOVA_03706 -1.2 -5.0 hypothetical protein compare
BACOVA_02416 -1.2 -7.2 ATP synthase F0, A subunit compare
BACOVA_05404 -1.1 -5.5 saccharopine dehydrogenase compare
BACOVA_02425 -1.1 -1.8 hypothetical protein compare
BACOVA_02419 -1.1 -6.3 ATP synthase F1, delta subunit compare
BACOVA_01149 -1.1 -3.5 nucleic acid-binding domain protein compare
BACOVA_03550 -1.1 -2.4 hypothetical protein compare
BACOVA_05379 -1.1 -1.6 hypothetical protein compare
BACOVA_02530 -1.1 -5.5 phosphomethylpyrimidine kinase compare
BACOVA_01573 -1.1 -5.5 transcriptional regulator, MarR family compare
BACOVA_04590 -1.1 -3.3 transcriptional regulator, Fur family compare
BACOVA_02420 -1.1 -7.6 ATP synthase F1, alpha subunit compare
BACOVA_02240 -1.1 -2.7 electron transport complex, RnfABCDGE type, E subunit compare
BACOVA_05549 -1.1 -4.9 Cof-like hydrolase compare
BACOVA_02594 -1.1 -2.7 hypothetical protein compare
BACOVA_01757 -1.0 -2.2 putative toxin-antitoxin system, toxin component compare
BACOVA_01209 -1.0 -2.5 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source D-Xylose in Bacteroides ovatus ATCC 8483

For carbon source D-Xylose across organisms