Experiment set1S344 for Bacteroides ovatus ATCC 8483

Compare to:

marine_broth_2216 1 x carbon source complex media

200 most detrimental genes:

  gene name fitness t score description  
BACOVA_03252 +1.2 6.9 ROK family protein compare
BACOVA_01707 +1.1 3.2 hypothetical protein compare
BACOVA_03251 +1.1 7.8 UbiC transcription regulator-associated domain protein compare
BACOVA_01415 +1.1 2.3 hypothetical protein compare
BACOVA_03250 +1.1 7.1 putative mannose-6-phosphate isomerase, class I compare
BACOVA_05219 +1.0 2.5 hypothetical protein compare
BACOVA_05428 +1.0 2.4 hypothetical protein compare
BACOVA_02867 +0.9 1.5 hypothetical protein compare
BACOVA_01551 +0.9 1.6 hypothetical protein compare
BACOVA_00095 +0.9 2.4 hypothetical protein compare
BACOVA_03404 +0.8 1.1 hypothetical protein compare
BACOVA_02340 +0.8 1.9 hypothetical protein compare
BACOVA_00464 +0.8 3.9 hypothetical protein compare
BACOVA_01982 +0.8 3.3 hypothetical protein compare
BACOVA_02601 +0.8 1.7 sigma-70, region 4 compare
BACOVA_03629 +0.7 6.3 putative alpha-1,2-mannosidase compare
BACOVA_01417 +0.7 1.5 putative DNA-binding protein compare
BACOVA_04987 +0.7 2.1 hypothetical protein compare
BACOVA_01690 +0.7 2.9 hypothetical protein compare
BACOVA_00879 +0.7 1.7 putative DNA-binding protein compare
BACOVA_00226 +0.7 1.8 hypothetical protein compare
BACOVA_03844 +0.7 1.2 hypothetical protein compare
BACOVA_00974 +0.7 1.5 hypothetical protein compare
BACOVA_02047 +0.7 2.2 hypothetical protein compare
BACOVA_04680 +0.7 2.5 hypothetical protein compare
BACOVA_00155 +0.7 4.1 sigma factor regulatory protein, FecR/PupR family compare
BACOVA_01129 +0.7 1.8 hypothetical protein compare
BACOVA_05426 +0.7 2.1 hypothetical protein compare
BACOVA_00783 +0.7 2.9 hypothetical protein compare
BACOVA_03201 +0.7 3.6 nitroreductase family protein compare
BACOVA_01541 +0.7 1.9 DNA-binding protein HU compare
BACOVA_02869 +0.7 1.4 transcriptional regulator, y4mF family compare
BACOVA_03933 +0.7 1.8 hypothetical protein compare
BACOVA_01936 +0.7 5.7 glycosyltransferase, group 2 family protein compare
BACOVA_00898 +0.7 4.5 hydrophobic domain protein compare
BACOVA_01935 +0.7 5.4 glycosyltransferase, group 2 family protein compare
BACOVA_02790 +0.6 2.6 hypothetical protein compare
BACOVA_04519 +0.6 1.1 hypothetical protein compare
BACOVA_01728 +0.6 1.3 hypothetical protein compare
BACOVA_01466 +0.6 2.1 hypothetical protein compare
BACOVA_04971 +0.6 1.3 hypothetical protein compare
BACOVA_01197 +0.6 1.3 hypothetical protein compare
BACOVA_04620 +0.6 1.2 hypothetical protein compare
BACOVA_01080 +0.6 2.2 hypothetical protein compare
BACOVA_04527 +0.6 0.8 hypothetical protein compare
BACOVA_03585 +0.6 4.9 AMP-binding enzyme compare
BACOVA_03906 +0.6 0.8 hypothetical protein compare
BACOVA_04430 +0.6 1.4 methylmalonyl-CoA epimerase compare
BACOVA_05608 +0.6 2.2 hypothetical protein compare
BACOVA_04236 +0.6 2.3 hypothetical protein compare
BACOVA_04315 +0.5 4.5 hypothetical protein compare
BACOVA_01437 +0.5 2.4 hypothetical protein compare
BACOVA_00844 +0.5 1.7 hypothetical protein compare
BACOVA_04313 +0.5 1.0 hypothetical protein compare
BACOVA_03448 +0.5 1.1 hypothetical protein compare
BACOVA_01538 +0.5 3.7 MIP family channel protein compare
BACOVA_01089 +0.5 2.3 hypothetical protein compare
BACOVA_03272 +0.5 1.2 hypothetical protein compare
BACOVA_04675 +0.5 1.6 hypothetical protein compare
BACOVA_04424 +0.5 1.2 nitroreductase family protein compare
BACOVA_01049 +0.5 2.0 hypothetical protein compare
BACOVA_00754 +0.5 1.7 hypothetical protein compare
BACOVA_04638 +0.5 2.8 putative RNA methyltransferase, RsmD family compare
BACOVA_01509 +0.5 0.9 PRTRC system protein C compare
BACOVA_03788 +0.5 1.6 hypothetical protein compare
BACOVA_05262 +0.5 3.1 cysteine-rich domain protein compare
BACOVA_03000 +0.5 1.4 hypothetical protein compare
BACOVA_01756 +0.5 2.5 dTDP-glucose 4,6-dehydratase compare
BACOVA_04091 +0.5 2.1 YhcH/YjgK/YiaL family protein compare
BACOVA_01113 +0.5 3.3 branched-chain-amino-acid transaminase compare
BACOVA_00834 +0.5 1.9 hypothetical protein compare
BACOVA_04580 +0.5 1.7 hypothetical protein compare
BACOVA_00720 +0.5 3.6 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein compare
BACOVA_01381 +0.5 2.3 hypothetical protein compare
BACOVA_03952 +0.5 2.7 hypothetical protein compare
BACOVA_01934 +0.5 3.8 hypothetical protein compare
BACOVA_04161 +0.5 2.0 hypothetical protein compare
BACOVA_02639 +0.5 2.1 hypothetical protein compare
BACOVA_02486 +0.5 2.0 response regulator receiver domain protein compare
BACOVA_04494 +0.5 1.9 6-O-methylguanine DNA methyltransferase, DNA binding domain protein compare
BACOVA_00765 +0.5 2.0 hypothetical protein compare
BACOVA_02897 +0.5 1.7 hypothetical protein compare
BACOVA_02870 +0.5 2.3 HipA domain protein compare
BACOVA_00805 +0.5 2.3 hypothetical protein compare
BACOVA_04736 +0.5 1.8 peptidase, M23 family compare
BACOVA_02931 +0.5 1.3 hypothetical protein compare
BACOVA_03307 +0.5 1.6 hypothetical protein compare
BACOVA_03672 +0.5 1.1 hypothetical protein compare
BACOVA_00640 +0.5 1.6 hypothetical protein compare
BACOVA_01510 +0.5 0.8 hypothetical protein compare
BACOVA_03674 +0.5 2.9 hypothetical protein compare
BACOVA_04113 +0.5 2.7 AP endonuclease, family 2 compare
BACOVA_02935 +0.5 0.8 tRNA-Phe compare
BACOVA_03249 +0.4 2.7 hypothetical protein compare
BACOVA_03389 +0.4 2.1 hypothetical protein compare
BACOVA_05391 +0.4 2.1 hypothetical protein compare
BACOVA_03637 +0.4 1.3 hypothetical protein compare
BACOVA_02105 +0.4 2.1 acetyl xylan esterase (AXE1) compare
BACOVA_02080 +0.4 1.9 peptidase, S54 family compare
BACOVA_05295 +0.4 2.0 hypothetical protein compare
BACOVA_02401 +0.4 1.0 hypothetical protein compare
BACOVA_05136 +0.4 2.4 hypothetical protein compare
BACOVA_02270 +0.4 1.8 hypothetical protein compare
BACOVA_05223 +0.4 0.8 Obg family GTPase CgtA compare
BACOVA_00947 +0.4 1.0 hypothetical protein compare
BACOVA_03902 +0.4 1.8 hypothetical protein compare
BACOVA_03718 +0.4 2.2 hypothetical protein compare
BACOVA_01775 +0.4 3.0 tetratricopeptide repeat domain protein compare
BACOVA_01929 +0.4 3.5 hypothetical protein compare
BACOVA_03946 +0.4 1.5 hypothetical protein compare
BACOVA_01662 +0.4 1.0 hypothetical protein compare
BACOVA_04007 +0.4 1.1 hypothetical protein compare
BACOVA_02018 +0.4 1.9 hypothetical protein compare
BACOVA_01119 +0.4 1.0 hypothetical protein compare
BACOVA_00726 +0.4 1.6 hypothetical protein compare
BACOVA_04308 +0.4 1.3 hypothetical protein compare
BACOVA_03889 +0.4 2.0 helicase C-terminal domain protein compare
BACOVA_04476 +0.4 1.2 hypothetical protein compare
BACOVA_00683 +0.4 2.1 hypothetical protein compare
BACOVA_01722 +0.4 1.7 site-specific recombinase, phage integrase family compare
BACOVA_02130 +0.4 1.9 hypothetical protein compare
BACOVA_02586 +0.4 0.9 putative bacteriocin export ABC transporter, lactococcin 972 group compare
BACOVA_04668 +0.4 1.5 bacterial mobilization protein MobC compare
BACOVA_01695 +0.4 2.0 hypothetical protein compare
BACOVA_03036 +0.4 0.7 hypothetical protein compare
BACOVA_04677 +0.4 1.7 hypothetical protein compare
BACOVA_01126 +0.4 3.0 ABC-2 type transporter compare
BACOVA_02400 +0.4 1.5 HAD hydrolase, family IA, variant 3 compare
BACOVA_04244 +0.4 1.7 putative DNA-binding protein compare
BACOVA_02510 +0.4 1.0 hypothetical protein compare
BACOVA_04740 +0.4 0.8 hypothetical protein compare
BACOVA_02220 +0.4 1.6 putative nodulation protein NolL compare
BACOVA_03472 +0.4 1.7 ThiF family protein compare
BACOVA_02403 +0.4 2.0 transporter, major facilitator family protein compare
BACOVA_00372 +0.4 1.6 hypothetical protein compare
BACOVA_05047 +0.4 1.6 hypothetical protein compare
BACOVA_05156 +0.4 1.0 hypothetical protein compare
BACOVA_03688 +0.4 3.4 polysaccharide biosynthesis protein compare
BACOVA_01564 +0.4 2.5 hypothetical protein compare
BACOVA_03687 +0.4 1.9 polysaccharide biosynthesis/export protein compare
BACOVA_01516 +0.4 1.2 hypothetical protein compare
BACOVA_05530 +0.4 1.0 hypothetical protein compare
BACOVA_03970 +0.4 2.5 4-phosphoerythronate dehydrogenase compare
BACOVA_01096 +0.4 2.0 hypothetical protein compare
BACOVA_00083 +0.4 2.5 ABC transporter, permease protein compare
BACOVA_05159 +0.4 1.0 hypothetical protein compare
BACOVA_00758 +0.4 2.4 hypothetical protein compare
BACOVA_02243 +0.4 1.9 toxin-antitoxin system, toxin component, RelE family compare
BACOVA_02046 +0.4 1.2 hypothetical protein compare
BACOVA_01154 +0.4 2.1 hypothetical protein compare
BACOVA_01657 +0.4 2.4 hypothetical protein compare
BACOVA_02359 +0.4 1.6 thiazole biosynthesis protein ThiG compare
BACOVA_01403 +0.4 1.7 hypothetical protein compare
BACOVA_03976 +0.4 1.7 hypothetical protein compare
BACOVA_05572 +0.4 1.8 hypothetical protein compare
BACOVA_02988 +0.4 1.3 DNA binding domain, excisionase family compare
BACOVA_04380 +0.4 2.5 Sigma-70 region 2 compare
BACOVA_02342 +0.4 1.5 hypothetical protein compare
BACOVA_01940 +0.4 1.0 hypothetical protein compare
BACOVA_04328 +0.4 1.6 hypothetical protein compare
BACOVA_01787 +0.4 2.5 hypothetical protein compare
BACOVA_02695 +0.4 0.6 hypothetical protein compare
BACOVA_01887 +0.4 2.3 hypothetical protein compare
BACOVA_01719 +0.4 0.9 transporter, major facilitator family protein compare
BACOVA_02977 +0.4 1.7 putative K+-transporting ATPase, F subunit compare
BACOVA_02278 +0.4 1.0 hypothetical protein compare
BACOVA_03587 +0.4 2.5 pyrroline-5-carboxylate reductase compare
BACOVA_00115 +0.4 1.1 hypothetical protein compare
BACOVA_00524 +0.4 0.7 tRNA-Glu compare
BACOVA_01053 +0.4 2.4 hexapeptide transferase family protein compare
BACOVA_00449 +0.4 0.7 hypothetical protein compare
BACOVA_02219 +0.4 2.1 glycosyltransferase, group 2 family protein compare
BACOVA_00576 +0.4 1.7 hypothetical protein compare
BACOVA_03999 +0.4 2.6 hypothetical protein compare
BACOVA_03715 +0.4 1.2 hypothetical protein compare
BACOVA_01540 +0.4 2.3 OmpA family protein compare
BACOVA_04721 +0.4 1.6 hypothetical protein compare
BACOVA_01930 +0.4 0.6 hypothetical protein compare
BACOVA_00696 +0.4 1.0 hypothetical protein compare
BACOVA_04755 +0.4 1.5 hypothetical protein compare
BACOVA_01582 +0.4 0.8 hypothetical protein compare
BACOVA_01563 +0.4 3.1 tetratricopeptide repeat protein compare
BACOVA_05551 +0.4 2.3 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase compare
BACOVA_01539 +0.4 2.5 hypothetical protein compare
BACOVA_04778 +0.4 2.0 hypothetical protein compare
BACOVA_04717 +0.4 1.7 hypothetical protein compare
BACOVA_01478 +0.4 1.5 glyoxalase family protein compare
BACOVA_01481 +0.4 1.0 hypothetical protein compare
BACOVA_05097 +0.4 2.2 large conductance mechanosensitive channel protein compare
BACOVA_03439 +0.4 1.8 hypothetical protein compare
BACOVA_04077 +0.4 1.7 hypothetical protein compare
BACOVA_01087 +0.4 2.0 hypothetical protein compare
BACOVA_00507 +0.4 2.5 6-phosphogluconolactonase compare
BACOVA_05137 +0.4 0.6 hypothetical protein compare
BACOVA_02360 +0.4 1.6 thiamine-phosphate diphosphorylase compare
BACOVA_01932 +0.4 3.0 glycosyltransferase family 6 compare
BACOVA_05174 +0.4 1.3 RNA polymerase sigma-70 factor compare
BACOVA_00486 +0.3 1.4 hypothetical protein compare
BACOVA_02825 +0.3 1.3 hypothetical protein compare
BACOVA_01543 +0.3 2.9 hypothetical protein compare


Specific Phenotypes

For 3 genes in this experiment

For carbon source complex media marine_broth_2216 in Bacteroides ovatus ATCC 8483

For carbon source complex media marine_broth_2216 across organisms