Experiment set1S343 for Escherichia coli HS(pFamp)R (ATCC 700891)

Compare to:

vio MOI10

200 most important genes:

  gene name fitness t score description  
OHPLBJKB_01652 -3.8 -2.6 hypothetical protein compare
OHPLBJKB_00911 -3.5 -7.8 RecBCD enzyme subunit RecD compare
OHPLBJKB_01653 -3.3 -2.3 hypothetical protein compare
OHPLBJKB_01650 -3.3 -2.3 putative low molecular weight protein-tyrosine-phosphatase AmsI compare
OHPLBJKB_02410 -3.3 -3.2 DNA topoisomerase 1 compare
OHPLBJKB_02047 -3.3 -2.2 Major outer membrane prolipoprotein Lpp compare
OHPLBJKB_01418 -3.1 -2.1 NAD(P)H-quinone oxidoreductase subunit 3 compare
OHPLBJKB_04260 -3.1 -11.9 putative ECA polymerase compare
OHPLBJKB_04262 -3.0 -7.5 Lipid III flippase compare
OHPLBJKB_01663 -3.0 -2.1 dTDP-4-dehydrorhamnose 3,5-epimerase compare
OHPLBJKB_01662 -2.8 -4.7 dTDP-4-dehydrorhamnose reductase compare
OHPLBJKB_01035 -2.8 -1.9 Protein RecA compare
OHPLBJKB_03607 -2.8 -5.3 'Bis(5'-nucleosyl)-tetraphosphatase, symmetrical' transl_table=11 compare
OHPLBJKB_00071 -2.8 -1.9 Lipopolysaccharide core biosynthesis protein RfaG compare
OHPLBJKB_03543 -2.7 -1.8 Aconitate hydratase B compare
OHPLBJKB_04239 -2.6 -1.8 Tyrosine recombinase XerC compare
OHPLBJKB_01668 -2.6 -7.5 hypothetical protein compare
OHPLBJKB_01649 -2.6 -6.7 hypothetical protein compare
OHPLBJKB_03236 -2.6 -6.4 ATP-dependent Clp protease proteolytic subunit compare
OHPLBJKB_04273 -2.5 -1.7 Thioredoxin 1 compare
OHPLBJKB_00908 -2.5 -2.4 RecBCD enzyme subunit RecC compare
OHPLBJKB_01669 -2.4 -7.4 Vitamin B12 import ATP-binding protein BtuD compare
OHPLBJKB_00278 -2.4 -7.7 Aerobic glycerol-3-phosphate dehydrogenase compare
OHPLBJKB_00072 -2.3 -2.7 Lipopolysaccharide core heptose(I) kinase RfaP compare
OHPLBJKB_02709 -2.3 -6.0 Outer membrane protein A compare
OHPLBJKB_00471 -2.3 -2.7 Inner membrane protein YhcB compare
OHPLBJKB_03235 -2.2 -4.8 ATP-dependent Clp protease ATP-binding subunit ClpX compare
OHPLBJKB_00668 -2.2 -10.9 Outer membrane protein TolC compare
OHPLBJKB_00821 -2.1 -3.5 Tyrosine recombinase XerD compare
OHPLBJKB_00077 -2.1 -2.4 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase compare
OHPLBJKB_02780 -2.0 -2.3 Thioredoxin reductase compare
OHPLBJKB_01711 -2.0 -2.4 hypothetical protein compare
OHPLBJKB_00298 -2.0 -3.5 Transcriptional regulatory protein OmpR compare
OHPLBJKB_01672 -1.9 -8.6 D-inositol-3-phosphate glycosyltransferase compare
OHPLBJKB_02990 -1.9 -2.5 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
OHPLBJKB_02388 -1.8 -2.5 Peptide transport periplasmic protein SapA compare
OHPLBJKB_02214 -1.8 -2.4 Protein FimG compare
OHPLBJKB_01670 -1.8 -6.8 O-antigen chain terminator bifunctional methyltransferase/kinase WbdD compare
OHPLBJKB_04235 -1.7 -2.3 Magnesium transport protein CorA compare
OHPLBJKB_01135 -1.7 -1.6 Anti-sigma-E factor RseA compare
OHPLBJKB_01901 -1.7 -5.5 Tail-specific protease compare
OHPLBJKB_02972 -1.7 -4.5 Peptidoglycan-associated lipoprotein compare
OHPLBJKB_03212 -1.7 -11.4 Multidrug efflux pump subunit AcrB compare
OHPLBJKB_03211 -1.7 -8.8 Multidrug efflux pump subunit AcrA compare
OHPLBJKB_01429 -1.7 -4.2 NADH-quinone oxidoreductase subunit M compare
OHPLBJKB_00210 -1.7 -3.8 Low-affinity inorganic phosphate transporter 1 compare
OHPLBJKB_00070 -1.6 -6.6 Lipopolysaccharide core heptosyltransferase RfaQ compare
OHPLBJKB_00316 -1.6 -3.5 DNA adenine methylase compare
OHPLBJKB_01426 -1.6 -1.8 NADH-quinone oxidoreductase subunit J compare
OHPLBJKB_03413 -1.6 -1.7 Antitoxin DinJ compare
OHPLBJKB_01425 -1.5 -2.0 NADH-quinone oxidoreductase subunit I compare
OHPLBJKB_02493 -1.5 -2.0 hypothetical protein compare
OHPLBJKB_00205 -1.5 -8.3 Oligopeptidase A compare
OHPLBJKB_01671 -1.5 -8.1 D-inositol-3-phosphate glycosyltransferase compare
OHPLBJKB_01143 -1.5 -2.8 'Pyridoxine 5'-phosphate synthase' transl_table=11 compare
OHPLBJKB_01423 -1.5 -4.9 NADH-quinone oxidoreductase subunit G compare
OHPLBJKB_03667 -1.5 -2.4 Non-canonical purine NTP phosphatase compare
OHPLBJKB_01138 -1.5 -3.9 Elongation factor 4 compare
OHPLBJKB_02954 -1.4 -5.0 UDP-glucose 4-epimerase compare
OHPLBJKB_03579 -1.4 -5.2 Catabolite repressor/activator compare
OHPLBJKB_02698 -1.4 -2.3 Acylphosphatase compare
OHPLBJKB_03038 -1.4 -5.8 N-acetylglucosamine-6-phosphate deacetylase compare
OHPLBJKB_04213 -1.4 -5.9 Sec-independent protein translocase protein TatC compare
OHPLBJKB_00075 -1.4 -1.9 Lipopolysaccharide core heptose(II) kinase RfaY compare
OHPLBJKB_04204 -1.4 -2.8 Trk system potassium uptake protein TrkH compare
OHPLBJKB_03030 -1.4 -4.7 putative protein YbfE compare
OHPLBJKB_01778 -1.4 -1.5 Transcriptional regulatory protein RcsA compare
OHPLBJKB_03896 -1.3 -5.7 L-lysine 2,3-aminomutase compare
OHPLBJKB_04088 -1.3 -2.0 Soluble pyridine nucleotide transhydrogenase compare
OHPLBJKB_01420 -1.3 -3.0 NADH-quinone oxidoreductase subunit C/D compare
OHPLBJKB_04379 -1.3 -3.0 hypothetical protein compare
OHPLBJKB_03032 -1.3 -1.9 Ferric uptake regulation protein compare
OHPLBJKB_03885 -1.3 -4.5 Elongation factor P--(R)-beta-lysine ligase compare
OHPLBJKB_02991 -1.3 -2.5 2-oxoglutarate dehydrogenase E1 component compare
OHPLBJKB_04247 -1.2 -4.4 Adenylate cyclase compare
OHPLBJKB_04135 -1.2 -4.0 ATP-dependent 6-phosphofructokinase isozyme 1 compare
OHPLBJKB_01197 -1.2 -4.0 Outer membrane protein assembly factor BamB compare
OHPLBJKB_03146 -1.2 -2.5 Virulence factors putative positive transcription regulator BvgA compare
OHPLBJKB_01824 -1.2 -2.7 Bacterial non-heme ferritin compare
OHPLBJKB_01419 -1.2 -4.4 NADH-quinone oxidoreductase subunit B compare
OHPLBJKB_01941 -1.2 -2.0 hypothetical protein compare
OHPLBJKB_01616 -1.2 -1.8 PTS system galactitol-specific EIIA component compare
OHPLBJKB_01731 -1.2 -1.8 hypothetical protein compare
OHPLBJKB_01673 -1.2 -5.5 D-inositol-3-phosphate glycosyltransferase compare
OHPLBJKB_02153 -1.2 -1.3 HTH-type transcriptional regulator GadW compare
OHPLBJKB_04130 -1.2 -1.7 hypothetical protein compare
OHPLBJKB_03865 -1.2 -2.3 Adenylosuccinate synthetase compare
OHPLBJKB_00092 -1.2 -2.2 Serine acetyltransferase compare
OHPLBJKB_01218 -1.2 -1.9 hypothetical protein compare
OHPLBJKB_01937 -1.2 -1.6 Protein YoaG compare
OHPLBJKB_00314 -1.2 -4.1 3-dehydroquinate synthase compare
OHPLBJKB_02588 -1.2 -1.8 Flagellar basal-body rod protein FlgF compare
OHPLBJKB_02856 -1.2 -2.0 hypothetical protein compare
OHPLBJKB_04050 -1.2 -3.7 DNA-binding protein HU-alpha compare
OHPLBJKB_01661 -1.1 -3.6 Glucose-1-phosphate thymidylyltransferase 2 compare
OHPLBJKB_01200 -1.1 -4.4 Exodeoxyribonuclease 7 large subunit compare
OHPLBJKB_01360 -1.1 -6.1 putative phospholipid-binding lipoprotein MlaA compare
OHPLBJKB_01647 -1.1 -1.3 IS1 family transposase IS1X4 compare
OHPLBJKB_01641 -1.1 -1.6 dCTP deaminase compare
OHPLBJKB_00299 -1.1 -4.9 Osmolarity sensor protein EnvZ compare
OHPLBJKB_00102 -1.1 -3.2 Mannitol-1-phosphate 5-dehydrogenase compare
OHPLBJKB_01475 -1.1 -1.9 hypothetical protein compare
OHPLBJKB_00078 -1.1 -1.7 O-antigen ligase compare
OHPLBJKB_03501 -1.1 -2.0 Periplasmic serine endoprotease DegP compare
OHPLBJKB_02973 -1.1 -4.5 Protein TolB compare
OHPLBJKB_01075 -1.1 -1.1 tRNA-Met compare
OHPLBJKB_01087 -1.1 -2.6 SsrA-binding protein compare
OHPLBJKB_00861 -1.0 -1.0 hypothetical protein compare
OHPLBJKB_01566 -1.0 -1.8 hypothetical protein compare
OHPLBJKB_01422 -1.0 -2.6 NADH-quinone oxidoreductase subunit F compare
OHPLBJKB_00531 -1.0 -1.6 Transcription termination/antitermination protein NusA compare
OHPLBJKB_03122 -1.0 -3.8 Enterochelin esterase compare
OHPLBJKB_04429 -1.0 -1.9 hypothetical protein compare
OHPLBJKB_00507 -1.0 -6.5 putative phospholipid ABC transporter-binding protein MlaD compare
OHPLBJKB_04261 -1.0 -4.4 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
OHPLBJKB_01424 -1.0 -2.2 NADH-quinone oxidoreductase subunit H compare
OHPLBJKB_02720 -1.0 -1.8 Cell division protein ZapC compare
OHPLBJKB_02857 -1.0 -1.7 hypothetical protein compare
OHPLBJKB_01695 -1.0 -2.0 hypothetical protein compare
OHPLBJKB_03461 -1.0 -1.8 D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase compare
OHPLBJKB_01253 -1.0 -0.9 hypothetical protein compare
OHPLBJKB_00076 -1.0 -3.1 General stress protein A compare
OHPLBJKB_02031 -1.0 -1.8 3-dehydroquinate dehydratase compare
OHPLBJKB_00676 -1.0 -4.4 Sensor protein QseC compare
OHPLBJKB_04264 -1.0 -3.9 dTDP-fucosamine acetyltransferase compare
OHPLBJKB_01857 -0.9 -2.2 tRNA U34 carboxymethyltransferase compare
OHPLBJKB_03014 -0.9 -2.2 hypothetical protein compare
OHPLBJKB_03634 -0.9 -2.2 hypothetical protein compare
OHPLBJKB_01646 -0.9 -1.4 IS1 family transposase IS1X2 compare
OHPLBJKB_02113 -0.9 -4.0 Mannose-6-phosphate isomerase compare
OHPLBJKB_01914 -0.9 -1.9 hypothetical protein compare
OHPLBJKB_01428 -0.9 -2.7 NADH-quinone oxidoreductase subunit L compare
OHPLBJKB_00505 -0.9 -5.9 putative phospholipid import ATP-binding protein MlaF compare
OHPLBJKB_01660 -0.9 -2.8 dTDP-glucose 4,6-dehydratase 2 compare
OHPLBJKB_02395 -0.9 -3.4 Exoribonuclease 2 compare
OHPLBJKB_02445 -0.9 -1.0 IS4 family transposase ISCro3 compare
OHPLBJKB_00856 -0.9 -2.0 Surface presentation of antigens protein SpaP compare
OHPLBJKB_01667 -0.9 -3.7 Phosphomannomutase/phosphoglucomutase compare
OHPLBJKB_03998 -0.9 -2.9 hypothetical protein compare
OHPLBJKB_00315 -0.9 -5.0 Cell division protein DamX compare
OHPLBJKB_02471 -0.8 -0.8 Small toxic polypeptide LdrA compare
OHPLBJKB_00445 -0.8 -3.4 putative tRNA-dihydrouridine synthase compare
OHPLBJKB_03288 -0.8 -2.7 Pyrroline-5-carboxylate reductase compare
OHPLBJKB_02350 -0.8 -2.3 hypothetical protein compare
OHPLBJKB_01316 -0.8 -2.5 hypothetical protein compare
OHPLBJKB_03777 -0.8 -3.5 DNA polymerase III subunit chi compare
OHPLBJKB_00475 -0.8 -3.7 Stringent starvation protein A compare
OHPLBJKB_00506 -0.8 -2.8 putative phospholipid ABC transporter permease protein MlaE compare
OHPLBJKB_02014 -0.8 -2.1 hypothetical protein compare
OHPLBJKB_02733 -0.8 -2.0 Aliphatic sulfonates import ATP-binding protein SsuB compare
OHPLBJKB_01780 -0.8 -1.9 hypothetical protein compare
OHPLBJKB_04432 -0.8 -1.8 hypothetical protein compare
OHPLBJKB_01823 -0.8 -2.3 hypothetical protein compare
OHPLBJKB_03588 -0.8 -1.3 Putative inhibitor of glucose uptake transporter SgrT compare
OHPLBJKB_01432 -0.8 -1.5 hypothetical protein compare
OHPLBJKB_00899 -0.8 -2.3 hypothetical protein compare
OHPLBJKB_00501 -0.8 -1.4 Lipopolysaccharide export system protein LptC compare
OHPLBJKB_01779 -0.8 -1.1 hypothetical protein compare
OHPLBJKB_00108 -0.8 -0.8 Protein YibA compare
OHPLBJKB_04270 -0.8 -4.8 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
OHPLBJKB_01795 -0.8 -2.1 HTH-type transcriptional activator RhaS compare
OHPLBJKB_01377 -0.8 -3.9 Penicillin-insensitive murein endopeptidase compare
OHPLBJKB_02946 -0.8 -4.2 6-phosphogluconolactonase compare
OHPLBJKB_00512 -0.8 -1.0 hypothetical protein compare
OHPLBJKB_02496 -0.8 -0.9 Murein tetrapeptide carboxypeptidase compare
OHPLBJKB_01756 -0.7 -1.2 Metal-binding protein ZinT compare
OHPLBJKB_02236 -0.7 -1.8 Protein bdm compare
OHPLBJKB_02705 -0.7 -2.4 Inner membrane protein YccF compare
OHPLBJKB_01493 -0.7 -2.2 Transcriptional regulatory protein RcsB compare
OHPLBJKB_01430 -0.7 -2.1 NADH-quinone oxidoreductase subunit N compare
OHPLBJKB_02362 -0.7 -1.8 HTH-type transcriptional repressor PurR compare
OHPLBJKB_02434 -0.7 -3.4 Cardiolipin synthase A compare
OHPLBJKB_03683 -0.7 -2.6 putative metal-dependent hydrolase YjjV compare
OHPLBJKB_04181 -0.7 -3.8 GTP-binding protein TypA/BipA compare
OHPLBJKB_02834 -0.7 -2.9 hypothetical protein compare
OHPLBJKB_02841 -0.7 -1.8 hypothetical protein compare
OHPLBJKB_01645 -0.7 -1.0 hypothetical protein compare
OHPLBJKB_02683 -0.7 -2.4 Low molecular weight protein-tyrosine-phosphatase Etp compare
OHPLBJKB_01936 -0.7 -1.5 putative protein YeaR compare
OHPLBJKB_00051 -0.7 -1.5 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
OHPLBJKB_02557 -0.7 -2.2 NADH dehydrogenase compare
OHPLBJKB_02581 -0.7 -2.4 Ribonuclease E compare
OHPLBJKB_03686 -0.7 -1.5 Osmotically-inducible protein Y compare
OHPLBJKB_02302 -0.7 -1.9 FMN-dependent NADH-azoreductase compare
OHPLBJKB_01702 -0.7 -1.8 hypothetical protein compare
OHPLBJKB_01388 -0.7 -3.9 Protein DedA compare
OHPLBJKB_00855 -0.7 -1.4 Surface presentation of antigens protein SpaO compare
OHPLBJKB_01045 -0.7 -4.7 Glutamate--cysteine ligase compare
OHPLBJKB_03687 -0.7 -4.0 Peptide chain release factor RF3 compare
OHPLBJKB_01924 -0.7 -2.2 2-iminobutanoate/2-iminopropanoate deaminase compare
OHPLBJKB_01902 -0.7 -2.3 Protease HtpX compare
OHPLBJKB_00147 -0.7 -2.7 IS3 family transposase IS150 compare
OHPLBJKB_00353 -0.7 -2.1 hypothetical protein compare
OHPLBJKB_00422 -0.7 -2.6 Shikimate dehydrogenase (NADP(+)) compare
OHPLBJKB_04267 -0.7 -3.4 UDP-N-acetyl-D-mannosamine dehydrogenase compare
OHPLBJKB_00603 -0.7 -3.0 Inner membrane protein YqjA compare
OHPLBJKB_03783 -0.7 -1.2 putative protein YjgL compare
OHPLBJKB_02409 -0.7 -1.6 HTH-type transcriptional regulator CysB compare
OHPLBJKB_03954 -0.7 -1.9 Galactose-6-phosphate isomerase subunit LacA compare
OHPLBJKB_04360 -0.7 -2.4 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment