Experiment set1S33 for Azospirillum sp. SherDot2

Compare to:

NL-CCM, start OD=0.3

200 most important genes:

  gene name fitness t score description  
MPMX19_00319 -2.7 -1.9 hypothetical protein compare
MPMX19_03906 -2.5 -13.3 Pca regulon regulatory protein compare
MPMX19_05624 -2.4 -2.3 hypothetical protein compare
MPMX19_00260 -2.4 -2.3 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_01748 -2.3 -3.1 hypothetical protein compare
MPMX19_05438 -2.2 -3.3 hypothetical protein compare
MPMX19_00263 -2.2 -2.6 hypothetical protein compare
MPMX19_03642 -2.1 -2.8 hypothetical protein compare
MPMX19_02981 -2.1 -5.4 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_00705 -2.0 -2.7 Cell division coordinator CpoB compare
MPMX19_00182 -1.9 -2.6 hypothetical protein compare
MPMX19_00148 -1.9 -2.9 hypothetical protein compare
MPMX19_04276 -1.9 -2.4 hypothetical protein compare
MPMX19_00262 -1.9 -2.1 Thiazole synthase compare
MPMX19_05458 -1.9 -3.9 hypothetical protein compare
MPMX19_05271 -1.8 -2.1 hypothetical protein compare
MPMX19_03389 -1.7 -3.0 Carbon monoxide dehydrogenase small chain compare
MPMX19_04948 -1.7 -1.8 HTH-type transcriptional regulator GltR compare
MPMX19_00694 -1.7 -2.2 2',3'-cyclic-nucleotide 2'-phosphodiesterase compare
MPMX19_01243 -1.6 -2.2 hypothetical protein compare
MPMX19_04208 -1.6 -3.2 flagellum biosynthesis repressor protein FlbT compare
MPMX19_00838 -1.6 -2.8 GTP pyrophosphokinase rsh compare
MPMX19_03499 -1.6 -3.2 Formate dehydrogenase, cytochrome b556(fdo) subunit compare
MPMX19_02514 -1.5 -1.7 hypothetical protein compare
MPMX19_03194 -1.5 -1.7 hypothetical protein compare
MPMX19_05203 -1.5 -2.7 hypothetical protein compare
MPMX19_00144 -1.5 -2.8 hypothetical protein compare
MPMX19_02303 -1.4 -2.3 hypothetical protein compare
MPMX19_03654 -1.4 -2.2 Fructokinase compare
MPMX19_01864 -1.4 -1.9 Regulatory protein AtoC compare
MPMX19_01495 -1.4 -2.1 hypothetical protein compare
MPMX19_02613 -1.4 -2.2 hypothetical protein compare
MPMX19_01702 -1.4 -2.2 Inorganic triphosphatase compare
MPMX19_02267 -1.4 -1.3 hypothetical protein compare
MPMX19_00297 -1.4 -1.7 4-carboxy-4-hydroxy-2-oxoadipate aldolase compare
MPMX19_01314 -1.3 -3.6 hypothetical protein compare
MPMX19_00472 -1.3 -2.1 Protein HesB, heterocyst compare
MPMX19_01111 -1.3 -2.1 Sensory histidine kinase/phosphatase NtrB compare
MPMX19_05333 -1.3 -2.0 Thymidine phosphorylase compare
MPMX19_00122 -1.3 -2.7 hypothetical protein compare
MPMX19_00503 -1.3 -3.5 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MPMX19_00718 -1.3 -2.3 hypothetical protein compare
MPMX19_04115 -1.2 -1.0 Sensor histidine kinase RcsC compare
MPMX19_00128 -1.2 -7.9 hypothetical protein compare
MPMX19_01545 -1.2 -1.2 Lon protease compare
MPMX19_05095 -1.2 -2.6 Toxin YoeB compare
MPMX19_00764 -1.2 -2.1 ECF RNA polymerase sigma factor EcfG compare
MPMX19_05442 -1.2 -2.4 Ribosomal large subunit pseudouridine synthase D compare
MPMX19_04687 -1.2 -2.0 Atrazine chlorohydrolase compare
MPMX19_00366 -1.2 -3.3 hypothetical protein compare
MPMX19_05100 -1.2 -2.6 hypothetical protein compare
MPMX19_05834 -1.2 -1.9 Hydrogen peroxide-inducible genes activator compare
MPMX19_03277 -1.2 -3.8 hypothetical protein compare
MPMX19_05680 -1.1 -3.0 Cell cycle response regulator CtrA compare
MPMX19_02927 -1.1 -2.8 5,6,7,8-tetrahydromethanopterin hydro-lyase compare
MPMX19_06315 -1.1 -1.7 ISL3 family transposase ISAli18 compare
MPMX19_03141 -1.1 -2.0 hypothetical protein compare
MPMX19_04210 -1.1 -1.8 hypothetical protein compare
MPMX19_02980 -1.1 -1.4 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_03157 -1.1 -1.6 hypothetical protein compare
MPMX19_02544 -1.1 -2.2 hypothetical protein compare
MPMX19_04042 -1.1 -2.8 hypothetical protein compare
MPMX19_05683 -1.1 -3.6 hypothetical protein compare
MPMX19_04316 -1.1 -3.5 hypothetical protein compare
MPMX19_05167 -1.0 -2.8 hypothetical protein compare
MPMX19_05181 -1.0 -1.1 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_00530 -1.0 -2.4 Orotate phosphoribosyltransferase compare
MPMX19_05607 -1.0 -3.0 Sensor histidine kinase RcsC compare
MPMX19_02679 -1.0 -1.9 hypothetical protein compare
MPMX19_06790 -1.0 -2.6 D-amino acid dehydrogenase compare
MPMX19_01883 -1.0 -4.2 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_02664 -1.0 -1.3 Arabinose 5-phosphate isomerase KdsD compare
MPMX19_00904 -1.0 -4.7 DNA repair protein RadA compare
MPMX19_03771 -1.0 -1.7 hypothetical protein compare
MPMX19_04430 -1.0 -2.4 hypothetical protein compare
MPMX19_06146 -1.0 -1.8 hypothetical protein compare
MPMX19_03752 -1.0 -1.4 hypothetical protein compare
MPMX19_03787 -1.0 -1.4 hypothetical protein compare
MPMX19_01376 -1.0 -1.9 hypothetical protein compare
MPMX19_03226 -1.0 -2.2 hypothetical protein compare
MPMX19_06934 -1.0 -2.5 Manganese transport system membrane protein MntB compare
MPMX19_02979 -1.0 -2.7 Hydrogen cyanide synthase subunit HcnB compare
MPMX19_00304 -0.9 -1.9 Phosphatidylcholine synthase compare
MPMX19_00511 -0.9 -2.9 hypothetical protein compare
MPMX19_06765 -0.9 -0.8 Hydrogen peroxide-inducible genes activator compare
MPMX19_06230 -0.9 -1.6 hypothetical protein compare
MPMX19_05070 -0.9 -3.4 hypothetical protein compare
MPMX19_02268 -0.9 -2.2 hypothetical protein compare
MPMX19_00156 -0.9 -2.7 hypothetical protein compare
MPMX19_05553 -0.9 -1.9 hypothetical protein compare
MPMX19_05686 -0.9 -2.0 Chemotaxis protein CheY compare
MPMX19_06853 -0.9 -2.4 Glyoxylate/hydroxypyruvate reductase A compare
MPMX19_02538 -0.9 -1.4 hypothetical protein compare
MPMX19_01491 -0.9 -1.4 hypothetical protein compare
MPMX19_04265 -0.9 -1.1 Aliphatic sulfonates import ATP-binding protein SsuB compare
MPMX19_03323 -0.9 -2.3 hypothetical protein compare
MPMX19_00143 -0.9 -3.5 Tyrosine recombinase XerC compare
MPMX19_03874 -0.9 -2.2 hypothetical protein compare
MPMX19_00126 -0.9 -1.9 hypothetical protein compare
MPMX19_00864 -0.9 -2.6 Flagellar hook-basal body complex protein FliE compare
MPMX19_01113 -0.9 -1.6 Adaptive-response sensory-kinase SasA compare
MPMX19_04554 -0.9 -2.2 Response regulator PleD compare
MPMX19_03653 -0.9 -3.3 Mannitol 2-dehydrogenase compare
MPMX19_05016 -0.9 -0.8 Sensor histidine kinase RcsC compare
MPMX19_01084 -0.8 -2.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_01822 -0.8 -3.4 2-isopropylmalate synthase compare
MPMX19_02911 -0.8 -1.7 hypothetical protein compare
MPMX19_05294 -0.8 -2.3 hypothetical protein compare
MPMX19_05448 -0.8 -2.0 DNA-invertase hin compare
MPMX19_05511 -0.8 -1.7 hypothetical protein compare
MPMX19_03230 -0.8 -2.6 hypothetical protein compare
MPMX19_03306 -0.8 -1.8 hypothetical protein compare
MPMX19_01395 -0.8 -1.3 hypothetical protein compare
MPMX19_03199 -0.8 -2.9 hypothetical protein compare
MPMX19_03165 -0.8 -1.5 hypothetical protein compare
MPMX19_00344 -0.8 -1.6 hypothetical protein compare
MPMX19_01585 -0.8 -1.7 Zinc uptake regulation protein compare
MPMX19_04000 -0.8 -1.9 Flagellar motor switch protein FliG compare
MPMX19_03822 -0.8 -1.4 Sulfur carrier protein FdhD compare
MPMX19_02171 -0.8 -3.3 putative ABC transporter ATP-binding protein YejF compare
MPMX19_01484 -0.8 -3.5 Flagellar basal-body rod protein FlgG compare
MPMX19_01054 -0.8 -2.8 Aspartate carbamoyltransferase compare
MPMX19_02657 -0.8 -6.6 Glutamate synthase [NADPH] large chain compare
MPMX19_01556 -0.8 -3.8 hypothetical protein compare
MPMX19_05435 -0.8 -2.9 L-threo-3-hydroxyaspartate ammonia-lyase compare
MPMX19_06661 -0.8 -2.6 hypothetical protein compare
MPMX19_01955 -0.8 -1.0 Putative anti-sigma factor antagonist compare
MPMX19_04093 -0.8 -2.2 hypothetical protein compare
MPMX19_00611 -0.8 -2.5 (3S)-malyl-CoA thioesterase compare
MPMX19_03610 -0.8 -2.5 Hexitol phosphatase A compare
MPMX19_02292 -0.8 -2.6 hypothetical protein compare
MPMX19_03169 -0.8 -0.9 Dihydroanticapsin 7-dehydrogenase compare
MPMX19_05586 -0.8 -1.0 hypothetical protein compare
MPMX19_04869 -0.8 -2.5 DNA polymerase I compare
MPMX19_03819 -0.8 -2.1 NADP-reducing hydrogenase subunit HndA compare
MPMX19_04325 -0.8 -2.8 hypothetical protein compare
MPMX19_06271 -0.8 -4.8 hypothetical protein compare
MPMX19_01400 -0.8 -1.3 hypothetical protein compare
MPMX19_06327 -0.8 -1.1 hypothetical protein compare
MPMX19_03252 -0.8 -2.1 hypothetical protein compare
MPMX19_03297 -0.7 -1.4 hypothetical protein compare
MPMX19_01704 -0.7 -1.4 hypothetical protein compare
MPMX19_04207 -0.7 -1.8 hypothetical protein compare
MPMX19_03435 -0.7 -1.9 hypothetical protein compare
MPMX19_02646 -0.7 -1.6 hypothetical protein compare
MPMX19_01125 -0.7 -1.0 hypothetical protein compare
MPMX19_00370 -0.7 -1.3 hypothetical protein compare
MPMX19_01321 -0.7 -2.2 tRNA-Cys compare
MPMX19_04258 -0.7 -2.0 hypothetical protein compare
MPMX19_06236 -0.7 -1.7 hypothetical protein compare
MPMX19_03634 -0.7 -1.7 Arginase compare
MPMX19_04620 -0.7 -1.8 HTH-type transcriptional regulator CynR compare
MPMX19_00417 -0.7 -2.5 hypothetical protein compare
MPMX19_06414 -0.7 -1.8 hypothetical protein compare
MPMX19_00766 -0.7 -1.3 hypothetical protein compare
MPMX19_01483 -0.7 -4.6 Flagellar basal-body rod protein FlgG compare
MPMX19_00615 -0.7 -1.8 hypothetical protein compare
MPMX19_04950 -0.7 -2.5 High-affinity branched-chain amino acid transport system permease protein LivH compare
MPMX19_01884 -0.7 -1.5 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_03891 -0.7 -1.6 Aliphatic sulfonates import ATP-binding protein SsuB compare
MPMX19_01860 -0.7 -1.6 hypothetical protein compare
MPMX19_03803 -0.7 -1.2 hypothetical protein compare
MPMX19_00986 -0.7 -3.3 Ribonuclease D compare
MPMX19_00794 -0.7 -1.8 Transcriptional activator protein CopR compare
MPMX19_04903 -0.7 -1.8 hypothetical protein compare
MPMX19_05392 -0.7 -3.7 hypothetical protein compare
MPMX19_04738 -0.7 -1.4 hypothetical protein compare
MPMX19_00665 -0.7 -1.9 hypothetical protein compare
MPMX19_04883 -0.7 -3.6 Spermidine-binding periplasmic protein SpuE compare
MPMX19_00207 -0.7 -2.3 hypothetical protein compare
MPMX19_04466 -0.7 -1.6 hypothetical protein compare
MPMX19_00608 -0.7 -0.7 hypothetical protein compare
MPMX19_00061 -0.7 -1.5 L-lysine 2,3-aminomutase compare
MPMX19_04933 -0.7 -2.8 hypothetical protein compare
MPMX19_02817 -0.7 -1.4 Serine 3-dehydrogenase compare
MPMX19_01610 -0.7 -1.1 ATP-dependent DNA helicase PcrA compare
MPMX19_04094 -0.7 -3.8 Flagellar M-ring protein compare
MPMX19_04921 -0.7 -1.6 HTH-type transcriptional regulator PuuR compare
MPMX19_05872 -0.7 -1.4 Redox-sensitive transcriptional activator SoxR compare
MPMX19_05432 -0.7 -2.1 hypothetical protein compare
MPMX19_05440 -0.7 -2.1 hypothetical protein compare
MPMX19_05393 -0.7 -1.7 hypothetical protein compare
MPMX19_03509 -0.7 -1.6 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic compare
MPMX19_05915 -0.7 -1.0 Flagellar M-ring protein compare
MPMX19_03536 -0.7 -1.9 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_00686 -0.7 -1.7 hypothetical protein compare
MPMX19_03586 -0.7 -1.6 HTH-type transcriptional repressor ComR compare
MPMX19_01007 -0.7 -3.2 Citrate synthase compare
MPMX19_03449 -0.7 -3.2 hypothetical protein compare
MPMX19_03197 -0.7 -1.5 hypothetical protein compare
MPMX19_03798 -0.7 -1.6 hypothetical protein compare
MPMX19_04199 -0.7 -3.6 Pseudaminic acid synthase compare
MPMX19_01277 -0.7 -3.0 hypothetical protein compare
MPMX19_03769 -0.7 -2.7 hypothetical protein compare
MPMX19_02658 -0.7 -4.4 Glutamate synthase [NADPH] small chain compare
MPMX19_03907 -0.7 -1.9 Short-chain-enoyl-CoA hydratase compare
MPMX19_01714 -0.7 -1.0 tRNA-modifying protein YgfZ compare
MPMX19_04673 -0.7 -1.7 Purine ribonucleoside efflux pump NepI compare
MPMX19_00863 -0.7 -2.7 Flagellar basal-body rod protein FlgC compare
MPMX19_03217 -0.6 -2.4 2-haloacrylate reductase compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm experiments