Experiment set1S323 for Acinetobacter radioresistens SK82

Compare to:

L-Serine nitrogen source

200 most important genes:

  gene name fitness t score description  
MPMX26_01300 -6.6 -10.0 Regulator of sigma-E protease RseP compare
MPMX26_02493 -6.2 -12.6 Outer membrane protein Omp38 compare
MPMX26_00421 -6.0 -22.3 Tail-specific protease compare
MPMX26_03206 -5.9 -3.6 hypothetical protein compare
MPMX26_00408 -5.9 -9.8 ATP-dependent Clp protease proteolytic subunit compare
MPMX26_00646 -5.8 -11.2 Ribonuclease G compare
MPMX26_00442 -5.8 -4.0 tRNA-Leu compare
MPMX26_00539 -5.7 -24.4 GTP pyrophosphokinase compare
MPMX26_02206 -5.7 -19.3 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX26_02937 -5.7 -5.5 Orotate phosphoribosyltransferase compare
MPMX26_00417 -5.7 -19.8 Gamma-glutamyl phosphate reductase compare
MPMX26_02984 -5.6 -13.6 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX26_00472 -5.4 -30.1 Acetolactate synthase isozyme 3 large subunit compare
MPMX26_00984 -5.3 -17.5 Anthranilate phosphoribosyltransferase compare
MPMX26_03013 -5.3 -38.0 Phosphoenolpyruvate carboxylase compare
MPMX26_00164 -5.2 -8.7 Response regulator GacA compare
MPMX26_02232 -5.2 -8.6 Diaminopimelate decarboxylase compare
MPMX26_02849 -5.1 -15.1 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX26_01140 -5.1 -14.0 Phosphoribosylamine--glycine ligase compare
MPMX26_00177 -5.1 -5.0 RNA polymerase-binding transcription factor DksA compare
MPMX26_00345 -5.1 -28.8 3-isopropylmalate dehydratase large subunit compare
MPMX26_01123 -5.1 -1.8 Protease HtpX compare
MPMX26_03019 -5.1 -27.2 Dihydroxy-acid dehydratase compare
MPMX26_02146 -5.1 -19.6 Aspartate/prephenate aminotransferase compare
MPMX26_02923 -5.1 -10.0 Putative manganese exporter compare
MPMX26_03051 -5.0 -14.5 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX26_00572 -5.0 -21.1 Pyrroline-5-carboxylate reductase compare
MPMX26_01284 -5.0 -27.0 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MPMX26_01112 -5.0 -4.6 Major cold shock protein CspA compare
MPMX26_00348 -4.9 -22.3 3-isopropylmalate dehydrogenase compare
MPMX26_02183 -4.9 -21.4 Phosphoribosylformylglycinamidine synthase compare
MPMX26_02902 -4.9 -13.4 Transcriptional activator protein ExaE compare
MPMX26_01871 -4.9 -28.7 Glutamate-pyruvate aminotransferase AlaA compare
MPMX26_00138 -4.9 -3.4 hypothetical protein compare
MPMX26_02334 -4.9 -13.7 Hydrogen peroxide-inducible genes activator compare
MPMX26_02900 -4.9 -36.6 Sensor histidine kinase RcsC compare
MPMX26_01122 -4.8 -17.0 Amidophosphoribosyltransferase compare
MPMX26_02135 -4.8 -27.0 Glutamate 5-kinase compare
MPMX26_03047 -4.8 -2.4 Chaperone protein DnaK compare
MPMX26_00474 -4.8 -23.9 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX26_02009 -4.7 -23.3 Alkyl hydroperoxide reductase C compare
MPMX26_00445 -4.7 -24.7 Branched-chain-amino-acid aminotransferase compare
MPMX26_01278 -4.7 -19.2 L-threonine dehydratase biosynthetic IlvA compare
MPMX26_00403 -4.7 -22.7 Homoserine O-succinyltransferase compare
MPMX26_01141 -4.7 -11.3 Bifunctional purine biosynthesis protein PurH compare
MPMX26_01645 -4.7 -22.9 O-succinylhomoserine sulfhydrylase compare
MPMX26_02586 -4.7 -15.0 Histidinol-phosphate aminotransferase compare
MPMX26_02808 -4.7 -35.0 Glutamate synthase [NADPH] large chain compare
MPMX26_00346 -4.7 -17.3 3-isopropylmalate dehydratase small subunit 1 compare
MPMX26_02618 -4.6 -22.7 N-(5'-phosphoribosyl)anthranilate isomerase compare
MPMX26_00975 -4.6 -26.0 hypothetical protein compare
MPMX26_02260 -4.6 -28.8 Argininosuccinate synthase compare
MPMX26_02617 -4.6 -21.1 Tryptophan synthase beta chain compare
MPMX26_02845 -4.6 -20.0 Histidine biosynthesis bifunctional protein HisB compare
MPMX26_00983 -4.6 -15.8 Indole-3-glycerol phosphate synthase compare
MPMX26_00342 -4.6 -9.7 RNA pyrophosphohydrolase compare
MPMX26_02807 -4.6 -29.5 Glutamate synthase [NADPH] small chain compare
MPMX26_00043 -4.6 -9.2 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
MPMX26_02860 -4.5 -5.5 tRNA-Ser compare
MPMX26_00199 -4.5 -25.5 Anthranilate synthase component 1 compare
MPMX26_00985 -4.5 -14.9 Anthranilate synthase component 2 compare
MPMX26_02413 -4.5 -21.7 Acetylglutamate kinase compare
MPMX26_00029 -4.5 -24.9 Amino-acid acetyltransferase compare
MPMX26_01090 -4.5 -1.6 Adenylosuccinate synthetase compare
MPMX26_00431 -4.5 -12.1 hypothetical protein compare
MPMX26_00378 -4.4 -19.4 Formyltetrahydrofolate deformylase compare
MPMX26_01283 -4.4 -5.6 ATP-dependent Clp protease adapter protein ClpS compare
MPMX26_02603 -4.4 -27.4 Arginine biosynthesis bifunctional protein ArgJ compare
MPMX26_02592 -4.4 -27.6 RNA polymerase sigma-54 factor compare
MPMX26_01281 -4.4 -28.0 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX26_02257 -4.4 -25.7 L-lactate dehydrogenase compare
MPMX26_02925 -4.3 -22.2 Pyruvate dehydrogenase E1 component compare
MPMX26_02588 -4.3 -19.2 ATP phosphoribosyltransferase compare
MPMX26_02021 -4.2 -9.0 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX26_00185 -4.2 -19.8 Argininosuccinate lyase compare
MPMX26_01242 -4.2 -4.1 Orotidine 5'-phosphate decarboxylase compare
MPMX26_02587 -4.2 -23.0 Histidinol dehydrogenase compare
MPMX26_00264 -4.2 -20.4 Histidine biosynthesis bifunctional protein HisIE compare
MPMX26_02839 -4.2 -8.0 Osmolarity sensor protein EnvZ compare
MPMX26_01642 -4.2 -30.1 Ribonuclease D compare
MPMX26_00597 -4.2 -15.3 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX26_01867 -4.2 -9.5 Bifunctional uridylyltransferase/uridylyl-removing enzyme compare
MPMX26_01084 -4.1 -23.8 Translational regulator CsrA compare
MPMX26_01287 -4.1 -11.9 Ornithine carbamoyltransferase 1, anabolic compare
MPMX26_02994 -4.1 -16.2 hypothetical protein compare
MPMX26_02846 -4.1 -17.4 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX26_02853 -4.1 -4.9 Homoserine kinase compare
MPMX26_00093 -4.1 -22.5 High-affinity zinc uptake system membrane protein ZnuB compare
MPMX26_00649 -4.1 -2.8 Phosphoadenosine phosphosulfate reductase compare
MPMX26_01209 -4.0 -3.4 RNA-binding protein Hfq compare
MPMX26_02797 -4.0 -17.8 2-iminobutanoate/2-iminopropanoate deaminase compare
MPMX26_00059 -4.0 -11.3 putative sugar transferase EpsL compare
MPMX26_01089 -4.0 -25.1 ATP phosphoribosyltransferase regulatory subunit compare
MPMX26_01292 -4.0 -13.0 DNA-binding transcriptional regulator NtrC compare
MPMX26_01328 -4.0 -21.5 HTH-type transcriptional regulator IscR compare
MPMX26_00364 -3.9 -12.9 hypothetical protein compare
MPMX26_01232 -3.9 -11.0 1,4-dihydroxy-2-naphthoyl-CoA synthase compare
MPMX26_02924 -3.9 -18.4 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex compare
MPMX26_00343 -3.9 -16.9 putative phosphatase compare
MPMX26_01587 -3.9 -4.2 hypothetical protein compare
MPMX26_02748 -3.9 -4.7 Shikimate dehydrogenase (NADP(+)) compare
MPMX26_01332 -3.9 -11.8 Peptidyl-prolyl cis-trans isomerase D compare
MPMX26_01099 -3.9 -2.7 Aspartate carbamoyltransferase compare
MPMX26_02503 -3.9 -8.3 hypothetical protein compare
MPMX26_02854 -3.8 -11.0 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX26_01271 -3.8 -7.8 hypothetical protein compare
MPMX26_01870 -3.8 -11.5 Peptide methionine sulfoxide reductase MsrB compare
MPMX26_00183 -3.8 -2.6 Phosphate-specific transport system accessory protein PhoU compare
MPMX26_00730 -3.8 -2.6 Outer-membrane lipoprotein LolB compare
MPMX26_02331 -3.7 -24.7 Rubredoxin compare
MPMX26_00096 -3.7 -19.0 High-affinity zinc uptake system protein ZnuA compare
MPMX26_00473 -3.7 -12.8 Acetolactate synthase isozyme 3 small subunit compare
MPMX26_00614 -3.7 -4.4 Sulfite reductase [ferredoxin] compare
MPMX26_00048 -3.7 -9.4 Low molecular weight protein-tyrosine-phosphatase Ptp compare
MPMX26_01120 -3.6 -2.5 Dihydroorotate dehydrogenase (quinone) compare
MPMX26_01100 -3.6 -4.3 Dihydroorotase-like protein compare
MPMX26_02489 -3.6 -3.4 GTP-binding protein TypA/BipA compare
MPMX26_00996 -3.5 -2.4 Superoxide dismutase [Fe] compare
MPMX26_00404 -3.5 -25.1 2-isopropylmalate synthase compare
MPMX26_00535 -3.5 -7.1 Signal transduction histidine-protein kinase BarA compare
MPMX26_02838 -3.5 -2.4 Transcriptional regulatory protein OmpR compare
MPMX26_00275 -3.5 -3.3 Polyribonucleotide nucleotidyltransferase compare
MPMX26_02950 -3.5 -22.4 Glutamate--cysteine ligase compare
MPMX26_02427 -3.5 -8.7 Aspartate/glutamate leucyltransferase compare
MPMX26_01293 -3.4 -6.6 Sensory histidine kinase/phosphatase NtrB compare
MPMX26_00205 -3.4 -5.6 tRNA-Trp compare
MPMX26_02238 -3.4 -2.3 Erythronate-4-phosphate dehydrogenase compare
MPMX26_02020 -3.4 -4.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX26_00094 -3.4 -16.0 Zinc import ATP-binding protein ZnuC compare
MPMX26_01175 -3.4 -3.3 Release factor glutamine methyltransferase compare
MPMX26_01060 -3.4 -10.7 hypothetical protein compare
MPMX26_01087 -3.3 -4.5 D-erythrose-4-phosphate dehydrogenase compare
MPMX26_00659 -3.2 -13.3 2-methyl-aconitate isomerase compare
MPMX26_02481 -3.2 -8.7 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) compare
MPMX26_02806 -3.2 -2.7 hypothetical protein compare
MPMX26_02726 -3.2 -18.7 HTH-type transcriptional repressor NsrR compare
MPMX26_00371 -3.2 -8.8 hypothetical protein compare
MPMX26_02574 -3.1 -13.6 Undecaprenyl-diphosphatase compare
MPMX26_00316 -3.1 -1.9 hypothetical protein compare
MPMX26_01320 -3.1 -11.7 hypothetical protein compare
MPMX26_00583 -3.1 -19.0 hypothetical protein compare
MPMX26_02732 -3.1 -14.1 ATP-dependent DNA helicase RecG compare
MPMX26_00766 -3.1 -2.1 Carbamoyl-phosphate synthase large chain compare
MPMX26_00047 -3.1 -15.0 Tyrosine-protein kinase ptk compare
MPMX26_03194 -3.1 -2.2 hypothetical protein compare
MPMX26_02113 -3.1 -14.6 Methionine aminopeptidase compare
MPMX26_00767 -3.0 -2.1 Carbamoyl-phosphate synthase small chain compare
MPMX26_01683 -3.0 -16.3 hypothetical protein compare
MPMX26_01231 -3.0 -21.8 Uracil-DNA glycosylase compare
MPMX26_02320 -3.0 -4.1 HTH-type transcriptional regulator SyrM 1 compare
MPMX26_00049 -3.0 -13.5 hypothetical protein compare
MPMX26_00045 -3.0 -25.3 Outer membrane protein MIP compare
MPMX26_00642 -3.0 -15.7 Cell shape-determining protein MreB compare
MPMX26_01264 -2.9 -18.2 Methionine aminopeptidase compare
MPMX26_02541 -2.9 -7.0 HTH-type transcriptional regulator CysL compare
MPMX26_00377 -2.9 -13.2 hypothetical protein compare
MPMX26_00737 -2.9 -14.6 SsrA-binding protein compare
MPMX26_02936 -2.9 -18.9 Glutathione synthetase compare
MPMX26_02171 -2.9 -7.4 HTH-type transcriptional regulator SsuR compare
MPMX26_02259 -2.9 -3.4 L-lactate permease compare
MPMX26_02193 -2.8 -21.6 hypothetical protein compare
MPMX26_02333 -2.8 -16.3 Aclacinomycin methylesterase RdmC compare
MPMX26_02378 -2.8 -1.4 Maleylpyruvate isomerase compare
MPMX26_02192 -2.8 -22.6 Biopolymer transport protein ExbD compare
MPMX26_02191 -2.8 -22.6 Tol-Pal system protein TolQ compare
MPMX26_00181 -2.8 -17.2 hypothetical protein compare
MPMX26_02949 -2.7 -13.0 Disulfide bond formation protein B compare
MPMX26_01753 -2.7 -15.8 Transaldolase compare
MPMX26_00771 -2.7 -8.7 Ribosomal RNA large subunit methyltransferase E compare
MPMX26_01182 -2.7 -16.4 hypothetical protein compare
MPMX26_00193 -2.7 -7.7 Trans-acting regulatory protein HvrA compare
MPMX26_00428 -2.7 -11.3 Cytoskeleton protein RodZ compare
MPMX26_02414 -2.6 -21.9 Phosphomannomutase/phosphoglucomutase compare
MPMX26_02525 -2.6 -19.7 Iron-sulfur cluster carrier protein compare
MPMX26_03113 -2.6 -1.9 hypothetical protein compare
MPMX26_02351 -2.6 -22.4 Methionine synthase compare
MPMX26_03008 -2.6 -5.5 Chaperone protein DnaJ compare
MPMX26_02194 -2.5 -19.8 Tol-Pal system protein TolB compare
MPMX26_03208 -2.5 -8.0 hypothetical protein compare
MPMX26_01760 -2.4 -20.2 Aminopeptidase N compare
MPMX26_02824 -2.4 -7.2 Ribosomal RNA small subunit methyltransferase H compare
MPMX26_00407 -2.4 -14.4 Trigger factor compare
MPMX26_00643 -2.4 -12.6 Cell shape-determining protein MreC compare
MPMX26_00095 -2.4 -15.9 Zinc uptake regulation protein compare
MPMX26_02107 -2.4 -4.9 Peptidoglycan glycosyltransferase MrdB compare
MPMX26_00226 -2.3 -19.3 Fatty acid oxidation complex subunit alpha compare
MPMX26_00315 -2.3 -14.3 Ribonuclease E compare
MPMX26_01039 -2.3 -9.5 hypothetical protein compare
MPMX26_03050 -2.3 -17.7 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX26_02195 -2.3 -17.6 Peptidoglycan-associated lipoprotein compare
MPMX26_01368 -2.2 -10.5 hypothetical protein compare
MPMX26_02258 -2.2 -15.6 Putative L-lactate dehydrogenase operon regulatory protein compare
MPMX26_00644 -2.2 -9.2 hypothetical protein compare
MPMX26_02311 -2.2 -7.0 Peptidoglycan D,D-transpeptidase MrdA compare
MPMX26_00054 -2.2 -7.0 N(5)-(carboxyethyl)ornithine synthase compare
MPMX26_00690 -2.2 -19.9 Multidrug efflux pump subunit AcrA compare
MPMX26_03139 -2.1 -8.2 hypothetical protein compare
MPMX26_02513 -2.1 -10.3 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP compare
MPMX26_02739 -2.1 -9.6 Intermembrane phospholipid transport system binding protein MlaD compare
MPMX26_00050 -2.1 -11.9 UDP-N-acetyl-D-glucosamine 6-dehydrogenase compare


Specific Phenotypes

For 37 genes in this experiment

For nitrogen source L-Serine in Acinetobacter radioresistens SK82

For nitrogen source L-Serine across organisms