Experiment set1S317 for Bacteroides ovatus ATCC 8483

Compare to:

Xylan from corncob 2.5 mg/mL carbon source

200 most detrimental genes:

  gene name fitness t score description  
BACOVA_02745 +1.6 13.5 glycosyl hydrolase family 3 N-terminal domain protein compare
BACOVA_02541 +1.4 4.1 putative RNA polymerase-binding protein DksA compare
BACOVA_01591 +1.4 3.2 hypothetical protein compare
BACOVA_04856 +1.4 3.4 putative NADH dehydrogenase subunit K compare
BACOVA_04684 +1.3 3.6 single-strand binding family protein compare
BACOVA_03979 +1.3 4.9 Sigma-70 region 2 compare
BACOVA_05219 +1.1 3.7 hypothetical protein compare
BACOVA_03666 +1.1 5.9 methylenetetrahydrofolate reductase (NAD(P)H) compare
BACOVA_05355 +1.1 1.8 hypothetical protein compare
BACOVA_01948 +1.1 7.2 Heptosyltransferase compare
BACOVA_01761 +1.1 1.6 hypothetical protein compare
BACOVA_05300 +1.1 2.1 hypothetical protein compare
BACOVA_04214 +1.0 2.7 hypothetical protein compare
BACOVA_02595 +0.9 2.1 hypothetical protein compare
BACOVA_04525 +0.9 1.6 hypothetical protein compare
BACOVA_01498 +0.9 2.5 hypothetical protein compare
BACOVA_02695 +0.9 1.6 hypothetical protein compare
BACOVA_01760 +0.9 5.5 hypothetical protein compare
BACOVA_04465 +0.9 7.1 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein compare
BACOVA_01278 +0.8 3.4 hypothetical protein compare
BACOVA_01643 +0.8 5.4 prokaryotic transcription elongation factor, GreA/GreB domain protein compare
BACOVA_03981 +0.8 4.5 OmpA family protein compare
BACOVA_01424 +0.8 1.0 hypothetical protein compare
BACOVA_05503 +0.8 3.6 hypothetical protein compare
BACOVA_02867 +0.8 1.1 hypothetical protein compare
BACOVA_01775 +0.7 4.6 tetratricopeptide repeat domain protein compare
BACOVA_00628 +0.7 2.9 hypothetical protein compare
BACOVA_04783 +0.7 1.9 hypothetical protein compare
BACOVA_04740 +0.7 1.5 hypothetical protein compare
BACOVA_03126 +0.7 1.6 hypothetical protein compare
BACOVA_05159 +0.7 1.5 hypothetical protein compare
BACOVA_04755 +0.7 1.8 hypothetical protein compare
BACOVA_00269 +0.7 2.5 hypothetical protein compare
BACOVA_02226 +0.7 1.7 N-acetylmuramoyl-L-alanine amidase compare
BACOVA_00080 +0.7 5.2 alpha-glucan phosphorylase compare
BACOVA_04556 +0.7 1.8 hypothetical protein compare
BACOVA_00358 +0.7 1.1 tRNA-Val compare
BACOVA_04654 +0.7 1.1 hypothetical protein compare
BACOVA_02215 +0.7 4.9 hypothetical protein compare
BACOVA_02274 +0.7 2.9 hypothetical protein compare
BACOVA_02869 +0.6 1.1 transcriptional regulator, y4mF family compare
BACOVA_04580 +0.6 2.0 hypothetical protein compare
BACOVA_01656 +0.6 4.1 hypothetical protein compare
BACOVA_03242 +0.6 3.0 putative DNA-binding protein compare
BACOVA_04677 +0.6 1.6 hypothetical protein compare
BACOVA_00538 +0.6 2.6 hypothetical protein compare
BACOVA_00664 +0.6 4.3 transcriptional regulator, AsnC family compare
BACOVA_04767 +0.6 1.6 hypothetical protein compare
BACOVA_02600 +0.6 1.4 hypothetical protein compare
BACOVA_03968 +0.6 4.1 bacterial cytochrome ubiquinol oxidase compare
BACOVA_01147 +0.6 2.6 DJ-1 family protein compare
BACOVA_01523 +0.6 2.1 hypothetical protein compare
BACOVA_02146 +0.6 2.3 hypothetical protein compare
BACOVA_03664 +0.6 2.1 PSP1 C-terminal domain protein compare
BACOVA_04994 +0.6 1.2 hypothetical protein compare
BACOVA_04700 +0.6 1.7 hypothetical protein compare
BACOVA_03351 +0.6 0.8 hypothetical protein compare
BACOVA_05391 +0.6 2.8 hypothetical protein compare
BACOVA_01326 +0.6 2.4 hypothetical protein compare
BACOVA_02934 +0.6 1.8 hypothetical protein compare
BACOVA_03741 +0.6 2.6 WxcM-like protein compare
BACOVA_04198 +0.6 1.3 hypothetical protein compare
BACOVA_03571 +0.6 3.1 hypothetical protein compare
BACOVA_05158 +0.6 4.8 hypothetical protein compare
BACOVA_05412 +0.6 3.2 hypothetical protein compare
BACOVA_04244 +0.6 1.8 putative DNA-binding protein compare
BACOVA_01485 +0.6 0.9 hypothetical protein compare
BACOVA_01669 +0.6 1.6 hypothetical protein compare
BACOVA_02522 +0.6 1.7 hypothetical protein compare
BACOVA_04488 +0.6 1.5 hypothetical protein compare
BACOVA_01881 +0.6 1.3 hypothetical protein compare
BACOVA_05136 +0.6 3.7 hypothetical protein compare
BACOVA_02539 +0.6 3.5 hypothetical protein compare
BACOVA_01516 +0.5 1.5 hypothetical protein compare
BACOVA_02319 +0.5 1.5 hypothetical protein compare
BACOVA_02400 +0.5 2.8 HAD hydrolase, family IA, variant 3 compare
BACOVA_02406 +0.5 1.2 chloramphenicol O-acetyltransferase compare
BACOVA_05385 +0.5 2.5 hypothetical protein compare
BACOVA_01887 +0.5 2.9 hypothetical protein compare
BACOVA_04698 +0.5 1.5 hypothetical protein compare
BACOVA_01662 +0.5 1.8 hypothetical protein compare
BACOVA_00196 +0.5 1.9 transcription termination/antitermination factor NusG compare
BACOVA_01509 +0.5 0.9 PRTRC system protein C compare
BACOVA_03036 +0.5 1.0 hypothetical protein compare
BACOVA_05428 +0.5 1.0 hypothetical protein compare
BACOVA_02322 +0.5 0.7 hypothetical protein compare
BACOVA_00406 +0.5 2.1 hypothetical protein compare
BACOVA_03272 +0.5 0.7 hypothetical protein compare
BACOVA_05257 +0.5 1.7 hypothetical protein compare
BACOVA_02401 +0.5 1.1 hypothetical protein compare
BACOVA_02453 +0.5 0.9 hypothetical protein compare
BACOVA_02780 +0.5 1.6 hypothetical protein compare
BACOVA_04466 +0.5 2.6 chromate transport protein compare
BACOVA_02376 +0.5 1.0 tRNA-Leu compare
BACOVA_03686 +0.5 3.5 chain length determinant protein compare
BACOVA_01122 +0.5 1.5 hypothetical protein compare
BACOVA_03585 +0.5 4.2 AMP-binding enzyme compare
BACOVA_02935 +0.5 0.9 tRNA-Phe compare
BACOVA_04691 +0.5 1.7 hypothetical protein compare
BACOVA_00083 +0.5 3.0 ABC transporter, permease protein compare
BACOVA_03672 +0.5 1.6 hypothetical protein compare
BACOVA_02306 +0.5 0.8 hypothetical protein compare
BACOVA_04915 +0.5 1.3 hypothetical protein compare
BACOVA_03310 +0.5 4.1 aconitate hydratase compare
BACOVA_01146 +0.5 2.0 TonB family domain protein compare
BACOVA_03560 +0.5 1.5 hypothetical protein compare
BACOVA_03829 +0.5 1.3 KDPG and KHG aldolase compare
BACOVA_02985 +0.5 1.3 hypothetical protein compare
BACOVA_01582 +0.5 1.1 hypothetical protein compare
BACOVA_00097 +0.5 3.5 phosphate acetyl/butyryl transferase compare
BACOVA_02547 +0.5 3.7 outer membrane protein, OMP85 family compare
BACOVA_00873 +0.5 2.6 biotin biosynthesis protein BioC compare
BACOVA_02514 +0.5 1.5 hypothetical protein compare
BACOVA_03132 +0.5 1.4 hypothetical protein compare
BACOVA_05291 +0.5 2.3 hypothetical protein compare
BACOVA_03676 +0.5 2.9 hypothetical protein compare
BACOVA_00781 +0.5 2.1 hypothetical protein compare
BACOVA_01930 +0.5 1.1 hypothetical protein compare
BACOVA_04417 +0.5 3.2 phosphate-selective porin O and P compare
BACOVA_00470 +0.5 1.9 hypothetical protein compare
BACOVA_00863 +0.5 1.9 transglycosylase associated protein compare
BACOVA_01580 +0.5 2.1 hypothetical protein compare
BACOVA_05572 +0.5 2.1 hypothetical protein compare
BACOVA_00866 +0.5 3.8 TonB-linked outer membrane protein, SusC/RagA family compare
BACOVA_03538 +0.5 2.6 aminotransferase, class I/II compare
BACOVA_02586 +0.5 1.3 putative bacteriocin export ABC transporter, lactococcin 972 group compare
BACOVA_02895 +0.5 2.4 tRNA-i(6)A37 thiotransferase enzyme MiaB compare
BACOVA_01658 +0.4 3.5 hypothetical protein compare
BACOVA_04574 +0.4 1.0 hypothetical protein compare
BACOVA_01074 +0.4 2.7 hypothetical protein compare
BACOVA_04064 +0.4 2.6 beta-ketoacyl-acyl-carrier-protein synthase III compare
BACOVA_03637 +0.4 1.8 hypothetical protein compare
BACOVA_03788 +0.4 0.9 hypothetical protein compare
BACOVA_04429 +0.4 2.9 hypothetical protein compare
BACOVA_04678 +0.4 1.2 hypothetical protein compare
BACOVA_01129 +0.4 1.1 hypothetical protein compare
BACOVA_02339 +0.4 0.8 hypothetical protein compare
BACOVA_00527 +0.4 2.1 transcriptional regulator, AraC family compare
BACOVA_03453 +0.4 1.8 hypothetical protein compare
BACOVA_03674 +0.4 2.6 hypothetical protein compare
BACOVA_02914 +0.4 2.0 tRNA pseudouridine synthase B compare
BACOVA_01657 +0.4 2.4 hypothetical protein compare
BACOVA_00794 +0.4 3.3 HAD hydrolase, family IIB compare
BACOVA_01984 +0.4 2.6 hypothetical protein compare
BACOVA_01707 +0.4 1.2 hypothetical protein compare
BACOVA_01112 +0.4 0.9 hydrolase compare
BACOVA_05447 +0.4 1.4 hypothetical protein compare
BACOVA_03952 +0.4 2.3 hypothetical protein compare
BACOVA_01481 +0.4 1.2 hypothetical protein compare
BACOVA_02136 +0.4 2.9 hypothetical protein compare
BACOVA_00699 +0.4 2.1 Creatinase compare
BACOVA_00892 +0.4 1.9 hypothetical protein compare
BACOVA_02253 +0.4 2.0 secondary thiamine-phosphate synthase enzyme compare
BACOVA_02504 +0.4 2.2 hypothetical protein compare
BACOVA_04559 +0.4 1.5 integrase core domain protein compare
BACOVA_01568 +0.4 1.5 hypothetical protein compare
BACOVA_03978 +0.4 1.8 LemA family protein compare
BACOVA_02523 +0.4 1.8 hypothetical protein compare
BACOVA_04494 +0.4 1.9 6-O-methylguanine DNA methyltransferase, DNA binding domain protein compare
BACOVA_03681 +0.4 1.3 HpcH/HpaI aldolase/citrate lyase family protein compare
BACOVA_00474 +0.4 1.0 hypothetical protein compare
BACOVA_05575 +0.4 1.3 hypothetical protein compare
BACOVA_01251 +0.4 2.0 RNA polymerase sigma-70 factor compare
BACOVA_00783 +0.4 1.4 hypothetical protein compare
BACOVA_03777 +0.4 1.8 hypothetical protein compare
BACOVA_00116 +0.4 3.1 putative glutamate/gamma-aminobutyrate antiporter compare
BACOVA_04067 +0.4 1.3 hypothetical protein compare
BACOVA_01766 +0.4 2.8 hypothetical protein compare
BACOVA_00947 +0.4 0.8 hypothetical protein compare
BACOVA_02280 +0.4 1.6 hypothetical protein compare
BACOVA_05097 +0.4 2.2 large conductance mechanosensitive channel protein compare
BACOVA_04971 +0.4 0.8 hypothetical protein compare
BACOVA_04008 +0.4 1.1 putative DNA-binding protein compare
BACOVA_01731 +0.4 1.3 hypothetical protein compare
BACOVA_02561 +0.4 1.9 FHA domain protein compare
BACOVA_00545 +0.4 1.2 hypothetical protein compare
BACOVA_00759 +0.4 2.8 hypothetical protein compare
BACOVA_04322 +0.4 1.7 hypothetical protein compare
BACOVA_01056 +0.4 1.1 hypothetical protein compare
BACOVA_04178 +0.4 1.2 hypothetical protein compare
BACOVA_01762 +0.4 1.8 hypothetical protein compare
BACOVA_02925 +0.4 0.9 conserved hypothetical protein YidD compare
BACOVA_05175 +0.4 0.8 hypothetical protein compare
BACOVA_01727 +0.4 0.6 putative DNA-binding protein compare
BACOVA_00160 +0.4 1.8 hypothetical protein compare
BACOVA_04555 +0.4 0.7 hypothetical protein compare
BACOVA_00345 +0.4 2.9 OmpA family protein compare
BACOVA_00744 +0.4 3.0 hypothetical protein compare
BACOVA_02508 +0.4 2.2 Tat pathway signal sequence domain protein compare
BACOVA_00871 +0.4 2.7 putative 8-amino-7-oxononanoate synthase compare
BACOVA_04213 +0.4 2.3 hypothetical protein compare
BACOVA_03976 +0.4 1.9 hypothetical protein compare
BACOVA_03002 +0.4 1.6 hypothetical protein compare
BACOVA_02252 +0.4 1.5 exodeoxyribonuclease III compare
BACOVA_00393 +0.4 0.8 Acyltransferase compare
BACOVA_03675 +0.4 2.4 glycosyltransferase, group 2 family protein compare
BACOVA_03086 +0.4 1.9 hypothetical protein compare
BACOVA_02407 +0.4 1.9 hypothetical protein compare
BACOVA_04055 +0.4 1.4 hypothetical protein compare
BACOVA_01867 +0.4 2.4 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Xylan from corncob in Bacteroides ovatus ATCC 8483

For carbon source Xylan from corncob across organisms