Experiment set1S304 for Bacteroides ovatus ATCC 8483

Compare to:

Inulin from chicory 2.5 mg/mL carbon source

200 most detrimental genes:

  gene name fitness t score description  
BACOVA_04527 +1.4 3.1 hypothetical protein compare
BACOVA_04524 +1.3 2.2 hypothetical protein compare
BACOVA_02695 +1.2 2.4 hypothetical protein compare
BACOVA_03666 +1.1 5.3 methylenetetrahydrofolate reductase (NAD(P)H) compare
BACOVA_01881 +1.1 2.5 hypothetical protein compare
BACOVA_04856 +1.0 2.3 putative NADH dehydrogenase subunit K compare
BACOVA_03689 +1.0 2.8 hypothetical protein compare
BACOVA_00323 +1.0 2.2 hypothetical protein compare
BACOVA_01643 +1.0 5.5 prokaryotic transcription elongation factor, GreA/GreB domain protein compare
BACOVA_03527 +1.0 1.5 PASTA domain protein compare
BACOVA_02047 +0.9 2.7 hypothetical protein compare
BACOVA_00511 +0.9 5.2 GDP-mannose 4,6-dehydratase compare
BACOVA_03906 +0.9 1.4 hypothetical protein compare
BACOVA_04675 +0.9 2.7 hypothetical protein compare
BACOVA_03911 +0.9 2.3 hypothetical protein compare
BACOVA_00545 +0.9 2.7 hypothetical protein compare
BACOVA_01591 +0.8 1.7 hypothetical protein compare
BACOVA_01131 +0.8 2.4 hypothetical protein compare
BACOVA_03036 +0.8 1.8 hypothetical protein compare
BACOVA_00312 +0.8 1.8 hypothetical protein compare
BACOVA_00952 +0.8 1.6 hypothetical protein compare
BACOVA_04574 +0.8 1.9 hypothetical protein compare
BACOVA_00715 +0.8 1.5 hypothetical protein compare
BACOVA_04682 +0.7 1.1 hypothetical protein compare
BACOVA_03816 +0.7 2.8 hypothetical protein compare
BACOVA_05219 +0.7 1.5 hypothetical protein compare
BACOVA_04381 +0.7 1.7 hypothetical protein compare
BACOVA_01466 +0.7 1.5 hypothetical protein compare
BACOVA_01316 +0.7 2.0 hypothetical protein compare
BACOVA_00331 +0.7 2.8 hypothetical protein compare
BACOVA_03903 +0.7 2.0 hypothetical protein compare
BACOVA_00406 +0.7 2.4 hypothetical protein compare
BACOVA_01541 +0.7 2.2 DNA-binding protein HU compare
BACOVA_04556 +0.7 1.7 hypothetical protein compare
BACOVA_00664 +0.7 3.9 transcriptional regulator, AsnC family compare
BACOVA_01465 +0.6 3.7 acetyl-CoA carboxylase, biotin carboxylase subunit compare
BACOVA_01419 +0.6 1.0 hypothetical protein compare
BACOVA_02297 +0.6 2.6 hypothetical protein compare
BACOVA_00585 +0.6 1.5 RyR domain protein compare
BACOVA_05530 +0.6 1.3 hypothetical protein compare
BACOVA_02471 +0.6 3.7 glycosyltransferase, group 2 family protein compare
BACOVA_04768 +0.6 1.8 conjugative transposon TraN protein compare
BACOVA_03132 +0.6 1.4 hypothetical protein compare
BACOVA_01618 +0.6 2.7 hypothetical protein compare
BACOVA_04867 +0.6 2.7 hypothetical protein compare
BACOVA_01322 +0.6 2.2 Sigma-70 region 2 compare
BACOVA_01719 +0.6 1.3 transporter, major facilitator family protein compare
BACOVA_02591 +0.6 2.9 GtrA-like protein compare
BACOVA_04255 +0.6 2.5 hypothetical protein compare
BACOVA_03418 +0.6 1.9 hypothetical protein compare
BACOVA_01074 +0.6 3.3 hypothetical protein compare
BACOVA_03448 +0.6 1.0 hypothetical protein compare
BACOVA_01769 +0.6 4.4 putative sulfate adenylyltransferase subunit 1 compare
BACOVA_04698 +0.6 2.3 hypothetical protein compare
BACOVA_00794 +0.6 4.6 HAD hydrolase, family IIB compare
BACOVA_02810 +0.6 1.3 hypothetical protein compare
BACOVA_00947 +0.6 1.7 hypothetical protein compare
BACOVA_01509 +0.6 1.0 PRTRC system protein C compare
BACOVA_03674 +0.6 3.3 hypothetical protein compare
BACOVA_03812 +0.6 2.2 hypothetical protein compare
BACOVA_04677 +0.6 2.2 hypothetical protein compare
BACOVA_02226 +0.6 1.2 N-acetylmuramoyl-L-alanine amidase compare
BACOVA_05061 +0.6 1.5 hypothetical protein compare
BACOVA_03866 +0.6 2.2 IS66 family element, transposase compare
BACOVA_02790 +0.6 1.6 hypothetical protein compare
BACOVA_02257 +0.6 1.7 hypothetical protein compare
BACOVA_02401 +0.6 1.4 hypothetical protein compare
BACOVA_03007 +0.6 3.5 homoserine O-succinyltransferase compare
BACOVA_02422 +0.6 2.3 hypothetical protein compare
BACOVA_01154 +0.6 2.6 hypothetical protein compare
BACOVA_01707 +0.5 1.4 hypothetical protein compare
BACOVA_01482 +0.5 2.2 hypothetical protein compare
BACOVA_00471 +0.5 1.5 conjugative transposon protein TraE compare
BACOVA_04007 +0.5 1.6 hypothetical protein compare
BACOVA_03688 +0.5 4.3 polysaccharide biosynthesis protein compare
BACOVA_00924 +0.5 1.3 hypothetical protein compare
BACOVA_01424 +0.5 1.0 hypothetical protein compare
BACOVA_03722 +0.5 1.5 Hsp20/alpha crystallin family protein compare
BACOVA_01381 +0.5 2.2 hypothetical protein compare
BACOVA_02274 +0.5 2.2 hypothetical protein compare
BACOVA_01781 +0.5 1.7 xanthine phosphoribosyltransferase compare
BACOVA_03881 +0.5 0.6 hypothetical protein compare
BACOVA_04643 +0.5 2.2 hypothetical protein compare
BACOVA_01443 +0.5 1.6 dTDP-glucose 4,6-dehydratase compare
BACOVA_05346 +0.5 1.8 hypothetical protein compare
BACOVA_00605 +0.5 2.2 phosphate transport system regulatory protein PhoU compare
BACOVA_04628 +0.5 3.6 transcriptional regulator, AraC family compare
BACOVA_04430 +0.5 1.2 methylmalonyl-CoA epimerase compare
BACOVA_02869 +0.5 0.6 transcriptional regulator, y4mF family compare
BACOVA_01703 +0.5 2.9 Vitamin B12 dependent methionine synthase, activation domain protein compare
BACOVA_01804 +0.5 1.5 hypothetical protein compare
BACOVA_03957 +0.5 2.5 hypothetical protein compare
BACOVA_02914 +0.5 2.3 tRNA pseudouridine synthase B compare
BACOVA_05262 +0.5 2.1 cysteine-rich domain protein compare
BACOVA_04019 +0.5 2.4 peptidase C1-like family compare
BACOVA_04661 +0.5 2.1 hypothetical protein compare
BACOVA_01756 +0.5 2.2 dTDP-glucose 4,6-dehydratase compare
BACOVA_03952 +0.5 2.6 hypothetical protein compare
BACOVA_02309 +0.5 1.5 DNA-binding helix-turn-helix protein compare
BACOVA_04754 +0.5 1.8 hypothetical protein compare
BACOVA_03475 +0.5 4.0 Sodium:neurotransmitter symporter family protein compare
BACOVA_01265 +0.5 1.9 hypothetical protein compare
BACOVA_01258 +0.5 1.2 hypothetical protein compare
BACOVA_03741 +0.5 2.0 WxcM-like protein compare
BACOVA_04008 +0.5 1.1 putative DNA-binding protein compare
BACOVA_03842 +0.5 1.7 transcriptional regulator, HxlR family compare
BACOVA_04519 +0.5 0.7 hypothetical protein compare
BACOVA_03928 +0.5 2.7 hypothetical protein compare
BACOVA_04755 +0.5 1.4 hypothetical protein compare
BACOVA_03981 +0.5 1.8 OmpA family protein compare
BACOVA_02410 +0.5 2.2 acetyltransferase, GNAT family compare
BACOVA_01767 +0.5 2.2 hypothetical protein compare
BACOVA_01404 +0.5 0.5 hypothetical protein compare
BACOVA_01141 +0.5 0.9 hypothetical protein compare
BACOVA_03788 +0.5 1.2 hypothetical protein compare
BACOVA_04971 +0.5 0.9 hypothetical protein compare
BACOVA_04130 +0.5 1.6 hypothetical protein compare
BACOVA_01463 +0.5 3.4 carboxyl transferase domain protein compare
BACOVA_02376 +0.5 0.8 tRNA-Leu compare
BACOVA_01940 +0.5 1.2 hypothetical protein compare
BACOVA_01510 +0.5 0.8 hypothetical protein compare
BACOVA_04295 +0.5 0.7 hypothetical protein compare
BACOVA_04236 +0.5 1.6 hypothetical protein compare
BACOVA_02578 +0.4 0.9 hypothetical protein compare
BACOVA_02406 +0.4 1.0 chloramphenicol O-acetyltransferase compare
BACOVA_05167 +0.4 1.4 hypothetical protein compare
BACOVA_01241 +0.4 1.2 hypothetical protein compare
BACOVA_03933 +0.4 0.9 hypothetical protein compare
BACOVA_04875 +0.4 1.9 hypothetical protein compare
BACOVA_05133 +0.4 2.1 hypothetical protein compare
BACOVA_05235 +0.4 1.5 hypothetical protein compare
BACOVA_04541 +0.4 1.9 hypothetical protein compare
BACOVA_03869 +0.4 1.7 hypothetical protein compare
BACOVA_05215 +0.4 2.4 YjeF domain protein compare
BACOVA_03841 +0.4 1.5 acetyltransferase, GNAT family compare
BACOVA_01768 +0.4 3.1 putative sulfate adenylyltransferase subunit 2 compare
BACOVA_01498 +0.4 1.0 hypothetical protein compare
BACOVA_04525 +0.4 0.7 hypothetical protein compare
BACOVA_00083 +0.4 2.5 ABC transporter, permease protein compare
BACOVA_01783 +0.4 1.5 indolepyruvate oxidoreductase subunit beta compare
BACOVA_02458 +0.4 2.7 polysaccharide biosynthesis protein compare
BACOVA_04466 +0.4 2.0 chromate transport protein compare
BACOVA_02213 +0.4 1.9 hypothetical protein compare
BACOVA_04680 +0.4 1.5 hypothetical protein compare
BACOVA_00771 +0.4 1.9 RNA polymerase sigma-70 factor compare
BACOVA_01479 +0.4 1.4 hypothetical protein compare
BACOVA_03351 +0.4 1.1 hypothetical protein compare
BACOVA_05016 +0.4 2.6 hypothetical protein compare
BACOVA_01933 +0.4 0.9 hypothetical protein compare
BACOVA_01516 +0.4 1.7 hypothetical protein compare
BACOVA_04561 +0.4 0.9 hypothetical protein compare
BACOVA_01712 +0.4 1.7 putative L-ribulose-5-phosphate 4-epimerase compare
BACOVA_03993 +0.4 1.8 glycosyltransferase, group 2 family protein compare
BACOVA_00538 +0.4 1.4 hypothetical protein compare
BACOVA_00449 +0.4 1.1 hypothetical protein compare
BACOVA_05401 +0.4 2.5 hypothetical protein compare
BACOVA_05462 +0.4 0.9 hypothetical protein compare
BACOVA_05504 +0.4 1.3 transcription termination/antitermination factor NusG compare
BACOVA_03970 +0.4 2.3 4-phosphoerythronate dehydrogenase compare
BACOVA_00402 +0.4 1.2 hypothetical protein compare
BACOVA_02302 +0.4 0.4 hypothetical protein compare
BACOVA_04715 +0.4 1.6 hypothetical protein compare
BACOVA_03898 +0.4 1.5 hypothetical protein compare
BACOVA_01761 +0.4 0.8 hypothetical protein compare
BACOVA_01887 +0.4 2.0 hypothetical protein compare
BACOVA_04537 +0.4 1.0 electron transfer flavoprotein domain protein compare
BACOVA_03772 +0.4 2.6 hypothetical protein compare
BACOVA_00155 +0.4 2.7 sigma factor regulatory protein, FecR/PupR family compare
BACOVA_00226 +0.4 0.7 hypothetical protein compare
BACOVA_03571 +0.4 2.0 hypothetical protein compare
BACOVA_02201 +0.4 1.8 hypothetical protein compare
BACOVA_02270 +0.4 1.3 hypothetical protein compare
BACOVA_02385 +0.4 1.8 response regulator receiver domain protein compare
BACOVA_05217 +0.4 1.5 hypothetical protein compare
BACOVA_02868 +0.4 1.8 hypothetical protein compare
BACOVA_04650 +0.4 1.2 hypothetical protein compare
BACOVA_02900 +0.4 1.1 N-acetylmuramoyl-L-alanine amidase compare
BACOVA_00464 +0.4 1.6 hypothetical protein compare
BACOVA_02397 +0.4 1.0 putative bacteriocin export ABC transporter, lactococcin 972 group compare
BACOVA_03827 +0.4 1.4 hypothetical protein compare
BACOVA_03777 +0.4 1.3 hypothetical protein compare
BACOVA_02080 +0.4 1.5 peptidase, S54 family compare
BACOVA_04771 +0.4 0.9 hypothetical protein compare
BACOVA_00599 +0.4 1.3 tetratricopeptide repeat protein compare
BACOVA_00348 +0.4 2.0 hypothetical protein compare
BACOVA_00527 +0.4 1.8 transcriptional regulator, AraC family compare
BACOVA_05503 +0.4 1.0 hypothetical protein compare
BACOVA_03887 +0.4 1.1 hypothetical protein compare
BACOVA_03682 +0.4 2.5 hypothetical protein compare
BACOVA_03676 +0.4 2.2 hypothetical protein compare
BACOVA_03927 +0.4 1.9 putative phage prohead protease, HK97 family compare
BACOVA_04736 +0.4 1.5 peptidase, M23 family compare
BACOVA_02925 +0.4 0.6 conserved hypothetical protein YidD compare
BACOVA_02243 +0.4 1.7 toxin-antitoxin system, toxin component, RelE family compare
BACOVA_03667 +0.4 1.7 ferritin-like protein compare
BACOVA_00879 +0.4 1.1 putative DNA-binding protein compare
BACOVA_02334 +0.4 2.3 HAD hydrolase, family IA, variant 3 compare
BACOVA_03526 +0.4 1.4 hypothetical protein compare
BACOVA_03585 +0.4 3.2 AMP-binding enzyme compare
BACOVA_03813 +0.4 1.9 TonB-dependent receptor compare


Specific Phenotypes

For 6 genes in this experiment

For carbon source Inulin from chicory in Bacteroides ovatus ATCC 8483

For carbon source Inulin from chicory across organisms