Experiment set1S26 for Azospirillum sp. SherDot2

Compare to:

NL-CCM, start OD=0.1

200 most important genes:

  gene name fitness t score description  
MPMX19_03906 -2.6 -15.5 Pca regulon regulatory protein compare
MPMX19_01054 -2.2 -6.8 Aspartate carbamoyltransferase compare
MPMX19_02543 -2.1 -2.4 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_03787 -2.1 -1.9 hypothetical protein compare
MPMX19_01560 -2.1 -4.0 3'-5' exonuclease DinG compare
MPMX19_01053 -2.0 -4.7 Dihydroorotase compare
MPMX19_00129 -1.9 -2.1 hypothetical protein compare
MPMX19_02267 -1.8 -1.7 hypothetical protein compare
MPMX19_00128 -1.7 -10.8 hypothetical protein compare
MPMX19_02303 -1.7 -3.2 hypothetical protein compare
MPMX19_04554 -1.7 -4.3 Response regulator PleD compare
MPMX19_02218 -1.7 -2.2 hypothetical protein compare
MPMX19_00530 -1.7 -3.7 Orotate phosphoribosyltransferase compare
MPMX19_00838 -1.6 -3.2 GTP pyrophosphokinase rsh compare
MPMX19_01076 -1.6 -2.7 Molybdopterin synthase catalytic subunit compare
MPMX19_03609 -1.6 -3.3 HTH-type transcriptional repressor NagR compare
MPMX19_06539 -1.5 -2.0 hypothetical protein compare
MPMX19_04449 -1.5 -1.6 Inosine-5'-monophosphate dehydrogenase compare
MPMX19_01714 -1.5 -1.9 tRNA-modifying protein YgfZ compare
MPMX19_02657 -1.4 -11.8 Glutamate synthase [NADPH] large chain compare
MPMX19_05438 -1.4 -3.2 hypothetical protein compare
MPMX19_04948 -1.4 -2.6 HTH-type transcriptional regulator GltR compare
MPMX19_03635 -1.4 -1.7 DNA-binding transcriptional activator DecR compare
MPMX19_05355 -1.4 -3.9 Transcriptional regulator SlyA compare
MPMX19_04079 -1.3 -1.6 hypothetical protein compare
MPMX19_05773 -1.3 -3.3 Putative 1,2-phenylacetyl-CoA epoxidase, subunit D compare
MPMX19_05581 -1.3 -1.6 hypothetical protein compare
MPMX19_01014 -1.2 -4.6 Indole-3-glycerol phosphate synthase compare
MPMX19_02742 -1.2 -2.7 hypothetical protein compare
MPMX19_01400 -1.2 -2.4 hypothetical protein compare
MPMX19_03652 -1.2 -3.9 Sorbitol dehydrogenase compare
MPMX19_00503 -1.2 -3.8 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MPMX19_03141 -1.2 -2.2 hypothetical protein compare
MPMX19_00131 -1.2 -2.3 hypothetical protein compare
MPMX19_00705 -1.1 -2.8 Cell division coordinator CpoB compare
MPMX19_06180 -1.1 -2.0 Sensor histidine kinase RegB compare
MPMX19_06253 -1.1 -2.4 hypothetical protein compare
MPMX19_05271 -1.1 -1.5 hypothetical protein compare
MPMX19_03072 -1.1 -1.6 hypothetical protein compare
MPMX19_01084 -1.1 -3.9 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_01883 -1.1 -5.4 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_00236 -1.1 -2.8 HTH-type transcriptional regulator IscR compare
MPMX19_04701 -1.1 -2.6 Transcriptional regulatory protein FixJ compare
MPMX19_06195 -1.0 -2.2 hypothetical protein compare
MPMX19_06967 -1.0 -1.9 hypothetical protein compare
MPMX19_05680 -1.0 -3.1 Cell cycle response regulator CtrA compare
MPMX19_04396 -1.0 -3.7 HTH-type transcriptional regulator HmrR compare
MPMX19_04325 -1.0 -4.2 hypothetical protein compare
MPMX19_02980 -1.0 -1.7 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_03196 -1.0 -2.8 hypothetical protein compare
MPMX19_01545 -1.0 -1.4 Lon protease compare
MPMX19_05831 -1.0 -2.7 Protein/nucleic acid deglycase 2 compare
MPMX19_03752 -1.0 -1.8 hypothetical protein compare
MPMX19_01585 -0.9 -2.4 Zinc uptake regulation protein compare
MPMX19_02675 -0.9 -7.1 Phosphoenolpyruvate-dependent phosphotransferase system compare
MPMX19_02981 -0.9 -3.9 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_04010 -0.9 -2.1 Isoaspartyl peptidase compare
MPMX19_01015 -0.9 -3.3 Anthranilate phosphoribosyltransferase compare
MPMX19_01304 -0.9 -5.5 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_01297 -0.9 -1.6 hypothetical protein compare
MPMX19_01912 -0.9 -2.5 Acetyl-CoA acetyltransferase compare
MPMX19_03722 -0.9 -1.8 hypothetical protein compare
MPMX19_00906 -0.9 -6.2 Amidophosphoribosyltransferase compare
MPMX19_00714 -0.9 -4.2 Ferrous-iron efflux pump FieF compare
MPMX19_01998 -0.8 -3.5 3-isopropylmalate dehydratase large subunit compare
MPMX19_04954 -0.8 -2.3 Putative hydro-lyase compare
MPMX19_06777 -0.8 -1.6 hypothetical protein compare
MPMX19_03788 -0.8 -3.2 hypothetical protein compare
MPMX19_00240 -0.8 -1.5 hypothetical protein compare
MPMX19_06353 -0.8 -1.4 hypothetical protein compare
MPMX19_03226 -0.8 -1.9 hypothetical protein compare
MPMX19_02405 -0.8 -1.9 hypothetical protein compare
MPMX19_00122 -0.8 -2.4 hypothetical protein compare
MPMX19_02202 -0.8 -1.8 hypothetical protein compare
MPMX19_03298 -0.8 -1.8 hypothetical protein compare
MPMX19_04244 -0.8 -2.6 hypothetical protein compare
MPMX19_04085 -0.8 -1.8 hypothetical protein compare
MPMX19_00050 -0.8 -2.3 Pyridoxal phosphate homeostasis protein compare
MPMX19_03612 -0.8 -2.9 hypothetical protein compare
MPMX19_03634 -0.8 -2.0 Arginase compare
MPMX19_00126 -0.8 -1.9 hypothetical protein compare
MPMX19_06033 -0.8 -3.1 Phosphate transport system permease protein PstC compare
MPMX19_06863 -0.8 -2.6 hypothetical protein compare
MPMX19_05624 -0.8 -1.3 hypothetical protein compare
MPMX19_02207 -0.8 -1.8 N-(5'-phosphoribosyl)anthranilate isomerase compare
MPMX19_05387 -0.8 -1.9 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
MPMX19_01834 -0.8 -1.6 hypothetical protein compare
MPMX19_02703 -0.8 -1.9 hypothetical protein compare
MPMX19_06763 -0.8 -2.5 hypothetical protein compare
MPMX19_01918 -0.8 -1.2 tRNA-Ala compare
MPMX19_05119 -0.8 -5.8 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_00132 -0.8 -2.4 hypothetical protein compare
MPMX19_01249 -0.8 -1.3 Periplasmic serine endoprotease DegP compare
MPMX19_00304 -0.8 -1.9 Phosphatidylcholine synthase compare
MPMX19_02736 -0.8 -5.0 Tryptophan synthase beta chain compare
MPMX19_02320 -0.8 -1.1 HTH-type transcriptional regulator GltR compare
MPMX19_05144 -0.8 -1.8 hypothetical protein compare
MPMX19_06179 -0.7 -1.2 putative SURF1-like protein compare
MPMX19_03798 -0.7 -2.1 hypothetical protein compare
MPMX19_02706 -0.7 -2.1 hypothetical protein compare
MPMX19_00432 -0.7 -2.4 hypothetical protein compare
MPMX19_00148 -0.7 -1.6 hypothetical protein compare
MPMX19_06123 -0.7 -1.5 hypothetical protein compare
MPMX19_06197 -0.7 -1.1 hypothetical protein compare
MPMX19_00190 -0.7 -2.2 hypothetical protein compare
MPMX19_01235 -0.7 -1.3 hypothetical protein compare
MPMX19_03276 -0.7 -1.8 hypothetical protein compare
MPMX19_01074 -0.7 -3.2 Molybdopterin molybdenumtransferase compare
MPMX19_00572 -0.7 -2.3 Type-4 uracil-DNA glycosylase compare
MPMX19_03586 -0.7 -1.9 HTH-type transcriptional repressor ComR compare
MPMX19_00025 -0.7 -1.3 hypothetical protein compare
MPMX19_05997 -0.7 -1.4 hypothetical protein compare
MPMX19_01729 -0.7 -1.3 Ethylmalonyl-CoA/methylmalonyl-CoA epimerase compare
MPMX19_05824 -0.7 -2.3 hypothetical protein compare
MPMX19_03168 -0.7 -3.5 hypothetical protein compare
MPMX19_02737 -0.7 -3.0 Tryptophan synthase alpha chain compare
MPMX19_00696 -0.7 -3.0 Crossover junction endodeoxyribonuclease RuvC compare
MPMX19_01794 -0.7 -2.2 Putative cysteine protease YraA compare
MPMX19_02658 -0.7 -4.8 Glutamate synthase [NADPH] small chain compare
MPMX19_04359 -0.7 -2.2 Ferredoxin, 2Fe-2S compare
MPMX19_01596 -0.7 -2.4 hypothetical protein compare
MPMX19_05915 -0.7 -1.8 Flagellar M-ring protein compare
MPMX19_04930 -0.7 -3.1 Hydrogen peroxide-inducible genes activator compare
MPMX19_02553 -0.7 -2.9 Protein-export protein SecB compare
MPMX19_05733 -0.7 -1.0 Biopolymer transport protein ExbD compare
MPMX19_04461 -0.7 -2.7 HTH-type transcriptional repressor RspR compare
MPMX19_04265 -0.7 -1.6 Aliphatic sulfonates import ATP-binding protein SsuB compare
MPMX19_04208 -0.7 -2.1 flagellum biosynthesis repressor protein FlbT compare
MPMX19_04694 -0.7 -1.7 Na(+)/H(+) antiporter subunit E1 compare
MPMX19_00619 -0.7 -2.2 Diacetyl reductase [(S)-acetoin forming] compare
MPMX19_02852 -0.7 -2.7 hypothetical protein compare
MPMX19_03668 -0.6 -2.9 hypothetical protein compare
MPMX19_06460 -0.6 -1.7 DNA-invertase hin compare
MPMX19_04171 -0.6 -1.4 16S ribosomal RNA compare
MPMX19_05358 -0.6 -0.8 hypothetical protein compare
MPMX19_00694 -0.6 -1.4 2',3'-cyclic-nucleotide 2'-phosphodiesterase compare
MPMX19_03367 -0.6 -1.9 Magnetosome membrane protein 22 compare
MPMX19_01111 -0.6 -1.1 Sensory histidine kinase/phosphatase NtrB compare
MPMX19_05359 -0.6 -3.3 hypothetical protein compare
MPMX19_05095 -0.6 -1.8 Toxin YoeB compare
MPMX19_06700 -0.6 -0.6 Copper-sensing transcriptional repressor RicR compare
MPMX19_00260 -0.6 -1.3 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_01727 -0.6 -2.2 hypothetical protein compare
MPMX19_01884 -0.6 -1.4 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_05816 -0.6 -2.8 Thiol-disulfide oxidoreductase ResA compare
MPMX19_06320 -0.6 -2.3 hypothetical protein compare
MPMX19_03654 -0.6 -1.6 Fructokinase compare
MPMX19_01630 -0.6 -1.9 Phosphoribosylamine--glycine ligase compare
MPMX19_03557 -0.6 -2.1 HTH-type transcriptional regulator CynR compare
MPMX19_01777 -0.6 -1.8 2-aminoadipate transaminase compare
MPMX19_05472 -0.6 -1.9 hypothetical protein compare
MPMX19_05272 -0.6 -1.9 hypothetical protein compare
MPMX19_02979 -0.6 -2.0 Hydrogen cyanide synthase subunit HcnB compare
MPMX19_06327 -0.6 -0.9 hypothetical protein compare
MPMX19_00141 -0.6 -2.0 hypothetical protein compare
MPMX19_06880 -0.6 -1.4 Validamycin A dioxygenase compare
MPMX19_05469 -0.6 -2.3 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_06399 -0.6 -1.6 hypothetical protein compare
MPMX19_01822 -0.6 -2.9 2-isopropylmalate synthase compare
MPMX19_00832 -0.6 -2.3 hypothetical protein compare
MPMX19_01463 -0.6 -2.8 hypothetical protein compare
MPMX19_01841 -0.6 -1.7 hypothetical protein compare
MPMX19_01703 -0.6 -1.0 hypothetical protein compare
MPMX19_00046 -0.6 -1.3 hypothetical protein compare
MPMX19_05658 -0.6 -1.7 hypothetical protein compare
MPMX19_02298 -0.6 -1.6 hypothetical protein compare
MPMX19_03552 -0.6 -1.6 hypothetical protein compare
MPMX19_02511 -0.6 -1.2 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase compare
MPMX19_01247 -0.6 -1.4 Transcriptional regulatory protein DegU compare
MPMX19_05445 -0.6 -1.7 tRNA-Glu compare
MPMX19_01085 -0.6 -2.6 hypothetical protein compare
MPMX19_01321 -0.6 -2.1 tRNA-Cys compare
MPMX19_03187 -0.6 -3.8 Magnesium-transporting ATPase, P-type 1 compare
MPMX19_02307 -0.6 -2.4 hypothetical protein compare
MPMX19_06877 -0.6 -2.0 hypothetical protein compare
MPMX19_05152 -0.6 -1.5 Phosphonoacetaldehyde hydrolase compare
MPMX19_00794 -0.6 -1.7 Transcriptional activator protein CopR compare
MPMX19_04818 -0.6 -2.1 Hydroxyacylglutathione hydrolase GloC compare
MPMX19_00841 -0.6 -1.1 Holo-[acyl-carrier-protein] synthase compare
MPMX19_00912 -0.6 -4.1 Bifunctional uridylyltransferase/uridylyl-removing enzyme compare
MPMX19_05498 -0.6 -1.8 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_02538 -0.6 -1.2 hypothetical protein compare
MPMX19_06271 -0.6 -3.9 hypothetical protein compare
MPMX19_06102 -0.6 -1.7 Membrane-bound lytic murein transglycosylase C compare
MPMX19_03389 -0.6 -2.0 Carbon monoxide dehydrogenase small chain compare
MPMX19_06519 -0.6 -0.7 HTH-type transcriptional repressor NagR compare
MPMX19_00140 -0.6 -3.4 hypothetical protein compare
MPMX19_04563 -0.6 -1.3 hypothetical protein compare
MPMX19_04956 -0.6 -3.3 5-oxoprolinase subunit B compare
MPMX19_04937 -0.6 -1.5 Mannosyl-D-glycerate transport/metabolism system repressor MngR compare
MPMX19_05507 -0.6 -2.3 Transcriptional regulatory protein DegU compare
MPMX19_06546 -0.6 -1.5 hypothetical protein compare
MPMX19_05451 -0.6 -2.7 hypothetical protein compare
MPMX19_05496 -0.6 -1.6 hypothetical protein compare
MPMX19_06044 -0.6 -1.1 hypothetical protein compare
MPMX19_01125 -0.6 -0.9 hypothetical protein compare
MPMX19_05443 -0.6 -2.6 hypothetical protein compare
MPMX19_03085 -0.6 -1.4 Hydrogen peroxide-inducible genes activator compare
MPMX19_03790 -0.5 -1.3 hypothetical protein compare
MPMX19_03197 -0.5 -1.5 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm experiments