Experiment set1S24 for Azospirillum sp. SherDot2

Compare to:

NLN

200 most important genes:

  gene name fitness t score description  
MPMX19_01884 -3.5 -4.2 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_02543 -3.4 -2.3 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_01883 -3.1 -9.5 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_03734 -3.1 -3.6 RutC family protein YjgH compare
MPMX19_03647 -3.0 -6.0 N-acetylglucosamine repressor compare
MPMX19_01630 -2.9 -5.2 Phosphoribosylamine--glycine ligase compare
MPMX19_02658 -2.9 -15.6 Glutamate synthase [NADPH] small chain compare
MPMX19_02657 -2.9 -20.3 Glutamate synthase [NADPH] large chain compare
MPMX19_00530 -2.7 -4.1 Orotate phosphoribosyltransferase compare
MPMX19_02207 -2.5 -4.0 N-(5'-phosphoribosyl)anthranilate isomerase compare
MPMX19_04392 -2.5 -3.7 Bifunctional methionine biosynthesis protein MetXA/MetW compare
MPMX19_01054 -2.4 -6.0 Aspartate carbamoyltransferase compare
MPMX19_00606 -2.4 -7.5 3-isopropylmalate dehydratase small subunit 1 compare
MPMX19_01053 -2.3 -4.7 Dihydroorotase compare
MPMX19_01998 -2.3 -6.2 3-isopropylmalate dehydratase large subunit compare
MPMX19_02736 -2.3 -11.8 Tryptophan synthase beta chain compare
MPMX19_02737 -2.3 -7.1 Tryptophan synthase alpha chain compare
MPMX19_01822 -2.3 -6.6 2-isopropylmalate synthase compare
MPMX19_01304 -2.2 -10.8 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_05727 -2.2 -8.4 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_00635 -2.2 -11.6 5,10-methylenetetrahydrofolate reductase compare
MPMX19_01014 -2.1 -6.2 Indole-3-glycerol phosphate synthase compare
MPMX19_00607 -2.1 -10.9 3-isopropylmalate dehydrogenase compare
MPMX19_00906 -2.1 -12.6 Amidophosphoribosyltransferase compare
MPMX19_04391 -2.1 -8.8 Homoserine O-acetyltransferase compare
MPMX19_02267 -2.0 -1.9 hypothetical protein compare
MPMX19_00128 -1.9 -12.4 hypothetical protein compare
MPMX19_02981 -1.9 -5.7 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_01939 -1.8 -4.3 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
MPMX19_03654 -1.8 -3.3 Fructokinase compare
MPMX19_03141 -1.8 -3.2 hypothetical protein compare
MPMX19_06050 -1.7 -12.9 Phosphoenolpyruvate carboxylase compare
MPMX19_01243 -1.6 -2.4 hypothetical protein compare
MPMX19_01084 -1.6 -4.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_05143 -1.5 -2.0 hypothetical protein compare
MPMX19_01409 -1.5 -8.6 Carbonic anhydrase 1 compare
MPMX19_00838 -1.5 -2.9 GTP pyrophosphokinase rsh compare
MPMX19_05023 -1.5 -2.1 hypothetical protein compare
MPMX19_01015 -1.4 -4.5 Anthranilate phosphoribosyltransferase compare
MPMX19_01364 -1.4 -9.5 O-succinylhomoserine sulfhydrylase compare
MPMX19_00705 -1.4 -2.9 Cell division coordinator CpoB compare
MPMX19_01560 -1.4 -2.8 3'-5' exonuclease DinG compare
MPMX19_02268 -1.4 -3.4 hypothetical protein compare
MPMX19_03252 -1.3 -3.8 hypothetical protein compare
MPMX19_02162 -1.3 -9.2 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX19_03196 -1.3 -3.4 hypothetical protein compare
MPMX19_04087 -1.2 -3.3 Flagellum site-determining protein YlxH compare
MPMX19_00126 -1.2 -2.3 hypothetical protein compare
MPMX19_04864 -1.2 -2.9 hypothetical protein compare
MPMX19_06090 -1.2 -2.1 Pyruvate dehydrogenase complex repressor compare
MPMX19_06141 -1.2 -3.2 Intermembrane phospholipid transport system permease protein MlaE compare
MPMX19_05442 -1.2 -2.7 Ribosomal large subunit pseudouridine synthase D compare
MPMX19_03635 -1.1 -1.5 DNA-binding transcriptional activator DecR compare
MPMX19_02772 -1.1 -2.7 N-acetylcysteine deacetylase compare
MPMX19_06579 -1.1 -2.7 Carnitine monooxygenase oxygenase subunit compare
MPMX19_00653 -1.1 -4.5 hypothetical protein compare
MPMX19_00696 -1.1 -4.3 Crossover junction endodeoxyribonuclease RuvC compare
MPMX19_00633 -1.1 -4.8 Intermembrane phospholipid transport system lipoprotein MlaA compare
MPMX19_01714 -1.1 -1.5 tRNA-modifying protein YgfZ compare
MPMX19_00632 -1.0 -3.0 Intermembrane phospholipid transport system binding protein MlaC compare
MPMX19_01499 -1.0 -3.4 hypothetical protein compare
MPMX19_05119 -1.0 -7.3 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_00319 -1.0 -1.4 hypothetical protein compare
MPMX19_03787 -1.0 -1.8 hypothetical protein compare
MPMX19_05111 -1.0 -2.8 PqqA binding protein compare
MPMX19_06277 -1.0 -6.6 hypothetical protein compare
MPMX19_06275 -1.0 -6.8 Argininosuccinate lyase compare
MPMX19_01342 -1.0 -2.0 hypothetical protein compare
MPMX19_02618 -1.0 -1.9 Transcriptional regulatory protein BaeR compare
MPMX19_01495 -1.0 -2.0 hypothetical protein compare
MPMX19_02980 -1.0 -1.7 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_04206 -1.0 -4.0 3-oxoacyl-[acyl-carrier-protein] synthase 3 compare
MPMX19_01545 -0.9 -1.3 Lon protease compare
MPMX19_06765 -0.9 -1.2 Hydrogen peroxide-inducible genes activator compare
MPMX19_01702 -0.9 -2.0 Inorganic triphosphatase compare
MPMX19_00652 -0.9 -7.5 Sulfite reductase [ferredoxin] compare
MPMX19_04208 -0.9 -2.6 flagellum biosynthesis repressor protein FlbT compare
MPMX19_00766 -0.9 -2.0 hypothetical protein compare
MPMX19_01297 -0.9 -1.6 hypothetical protein compare
MPMX19_04968 -0.9 -1.4 hypothetical protein compare
MPMX19_01050 -0.9 -1.7 hypothetical protein compare
MPMX19_01777 -0.9 -1.9 2-aminoadipate transaminase compare
MPMX19_00304 -0.9 -2.1 Phosphatidylcholine synthase compare
MPMX19_03425 -0.9 -1.7 hypothetical protein compare
MPMX19_02320 -0.9 -1.5 HTH-type transcriptional regulator GltR compare
MPMX19_03650 -0.9 -5.1 Diacetylchitobiose uptake system permease protein NgcG compare
MPMX19_03276 -0.8 -2.4 hypothetical protein compare
MPMX19_03169 -0.8 -1.6 Dihydroanticapsin 7-dehydrogenase compare
MPMX19_05387 -0.8 -2.1 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
MPMX19_06547 -0.8 -3.9 hypothetical protein compare
MPMX19_03195 -0.8 -1.6 hypothetical protein compare
MPMX19_03806 -0.8 -2.3 hypothetical protein compare
MPMX19_00650 -0.8 -4.3 Siroheme synthase compare
MPMX19_04954 -0.8 -2.4 Putative hydro-lyase compare
MPMX19_00066 -0.8 -1.6 hypothetical protein compare
MPMX19_00904 -0.8 -4.6 DNA repair protein RadA compare
MPMX19_04199 -0.8 -5.1 Pseudaminic acid synthase compare
MPMX19_06969 -0.8 -2.2 hypothetical protein compare
MPMX19_06808 -0.8 -1.6 HTH-type transcriptional regulator DmlR compare
MPMX19_03851 -0.8 -2.4 hypothetical protein compare
MPMX19_03652 -0.8 -2.7 Sorbitol dehydrogenase compare
MPMX19_04114 -0.8 -3.1 hypothetical protein compare
MPMX19_04204 -0.8 -4.6 D-alanine--D-alanyl carrier protein ligase compare
MPMX19_01247 -0.8 -1.5 Transcriptional regulatory protein DegU compare
MPMX19_00503 -0.8 -2.7 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MPMX19_03212 -0.8 -1.6 hypothetical protein compare
MPMX19_05680 -0.8 -2.5 Cell cycle response regulator CtrA compare
MPMX19_05825 -0.8 -2.1 hypothetical protein compare
MPMX19_03035 -0.8 -2.2 Protein YceI compare
MPMX19_04053 -0.8 -2.7 Transcriptional regulatory protein OmpR compare
MPMX19_02850 -0.8 -1.9 Glyceraldehyde-3-phosphate dehydrogenase 1 compare
MPMX19_04112 -0.8 -3.1 hypothetical protein compare
MPMX19_03096 -0.8 -1.4 hypothetical protein compare
MPMX19_03649 -0.8 -4.2 Trehalose transport system permease protein SugA compare
MPMX19_00181 -0.8 -2.8 hypothetical protein compare
MPMX19_06914 -0.8 -1.8 Acyl-CoA dehydrogenase FadE27 compare
MPMX19_04457 -0.7 -3.3 Pyruvate, phosphate dikinase compare
MPMX19_03653 -0.7 -3.5 Mannitol 2-dehydrogenase compare
MPMX19_01497 -0.7 -2.2 hypothetical protein compare
MPMX19_00122 -0.7 -2.3 hypothetical protein compare
MPMX19_06033 -0.7 -3.0 Phosphate transport system permease protein PstC compare
MPMX19_02779 -0.7 -1.7 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_05449 -0.7 -1.8 hypothetical protein compare
MPMX19_04465 -0.7 -4.7 Pantothenate synthetase compare
MPMX19_05831 -0.7 -2.2 Protein/nucleic acid deglycase 2 compare
MPMX19_03226 -0.7 -2.2 hypothetical protein compare
MPMX19_00366 -0.7 -2.8 hypothetical protein compare
MPMX19_00351 -0.7 -3.1 hypothetical protein compare
MPMX19_04205 -0.7 -2.5 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_05070 -0.7 -3.5 hypothetical protein compare
MPMX19_05472 -0.7 -2.2 hypothetical protein compare
MPMX19_06150 -0.7 -2.5 Corrinoid adenosyltransferase compare
MPMX19_01244 -0.7 -2.0 hypothetical protein compare
MPMX19_05725 -0.7 -1.3 hypothetical protein compare
MPMX19_02227 -0.7 -5.4 Pyruvate, phosphate dikinase compare
MPMX19_02703 -0.7 -1.7 hypothetical protein compare
MPMX19_04218 -0.7 -3.2 Protein phosphatase PrpC compare
MPMX19_06179 -0.7 -1.4 putative SURF1-like protein compare
MPMX19_06028 -0.7 -2.2 hypothetical protein compare
MPMX19_00862 -0.7 -3.9 hypothetical protein compare
MPMX19_03822 -0.7 -1.2 Sulfur carrier protein FdhD compare
MPMX19_03499 -0.7 -1.7 Formate dehydrogenase, cytochrome b556(fdo) subunit compare
MPMX19_00648 -0.7 -4.0 Sulfate adenylyltransferase subunit 2 compare
MPMX19_00020 -0.7 -1.1 hypothetical protein compare
MPMX19_03976 -0.7 -2.8 hypothetical protein compare
MPMX19_00262 -0.7 -1.1 Thiazole synthase compare
MPMX19_02002 -0.7 -2.2 hypothetical protein compare
MPMX19_00693 -0.7 -3.3 5-formyltetrahydrofolate cyclo-ligase compare
MPMX19_01314 -0.7 -2.6 hypothetical protein compare
MPMX19_04474 -0.7 -2.4 hypothetical protein compare
MPMX19_05217 -0.7 -0.7 Flagellin compare
MPMX19_04092 -0.7 -3.8 Flagellar motor switch protein FliN compare
MPMX19_04115 -0.7 -1.1 Sensor histidine kinase RcsC compare
MPMX19_00976 -0.7 -1.3 ATP-dependent RNA helicase RhlE compare
MPMX19_06644 -0.7 -5.7 GDP-mannose 4,6-dehydratase compare
MPMX19_02123 -0.7 -2.3 Glycerol-3-phosphate dehydrogenase [NAD(P)+] compare
MPMX19_02514 -0.7 -0.7 hypothetical protein compare
MPMX19_05534 -0.6 -1.4 DNA gyrase inhibitor YacG compare
MPMX19_00647 -0.6 -5.0 Bifunctional enzyme CysN/CysC compare
MPMX19_04316 -0.6 -2.8 hypothetical protein compare
MPMX19_02298 -0.6 -1.8 hypothetical protein compare
MPMX19_04869 -0.6 -2.6 DNA polymerase I compare
MPMX19_03609 -0.6 -1.7 HTH-type transcriptional repressor NagR compare
MPMX19_00141 -0.6 -2.5 hypothetical protein compare
MPMX19_03892 -0.6 -3.1 HTH-type transcriptional repressor NanR compare
MPMX19_04683 -0.6 -1.9 Acylamidase compare
MPMX19_01365 -0.6 -1.0 hypothetical protein compare
MPMX19_04571 -0.6 -1.6 hypothetical protein compare
MPMX19_03620 -0.6 -2.3 hypothetical protein compare
MPMX19_01601 -0.6 -2.9 DNA repair protein RecN compare
MPMX19_01421 -0.6 -1.0 hypothetical protein compare
MPMX19_03292 -0.6 -1.4 hypothetical protein compare
MPMX19_06580 -0.6 -2.8 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_00266 -0.6 -1.3 hypothetical protein compare
MPMX19_05606 -0.6 -1.1 hypothetical protein compare
MPMX19_02486 -0.6 -1.8 Chemotaxis protein CheY compare
MPMX19_03207 -0.6 -4.1 hypothetical protein compare
MPMX19_03194 -0.6 -1.4 hypothetical protein compare
MPMX19_04422 -0.6 -2.7 Benzoate--CoA ligase compare
MPMX19_05954 -0.6 -2.7 hypothetical protein compare
MPMX19_04696 -0.6 -1.7 Na(+)/H(+) antiporter subunit C1 compare
MPMX19_05451 -0.6 -3.0 hypothetical protein compare
MPMX19_00152 -0.6 -1.2 hypothetical protein compare
MPMX19_00794 -0.6 -1.9 Transcriptional activator protein CopR compare
MPMX19_00513 -0.6 -3.0 Phosphotransferase RcsD compare
MPMX19_05014 -0.6 -1.3 Cytochrome c1 compare
MPMX19_00166 -0.6 -1.2 hypothetical protein compare
MPMX19_00157 -0.6 -4.6 hypothetical protein compare
MPMX19_06418 -0.6 -3.3 Adaptive-response sensory-kinase SasA compare
MPMX19_02601 -0.6 -3.6 hypothetical protein compare
MPMX19_03688 -0.6 -2.1 Response regulator UvrY compare
MPMX19_00986 -0.6 -3.2 Ribonuclease D compare
MPMX19_02402 -0.6 -1.5 hypothetical protein compare
MPMX19_00634 -0.6 -3.7 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial compare
MPMX19_05298 -0.6 -2.7 Periplasmic [NiFeSe] hydrogenase large subunit compare
MPMX19_01990 -0.6 -4.4 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme compare
MPMX19_00061 -0.6 -1.6 L-lysine 2,3-aminomutase compare
MPMX19_02392 -0.6 -4.9 Aspartate/prephenate aminotransferase compare
MPMX19_00149 -0.6 -2.7 hypothetical protein compare
MPMX19_04953 -0.6 -1.9 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nln experiments