Experiment set1S22 for Azospirillum sp. SherDot2

Compare to:

NLN

200 most detrimental genes:

  gene name fitness t score description  
MPMX19_06197 +1.0 2.6 hypothetical protein compare
MPMX19_01918 +0.9 2.3 tRNA-Ala compare
MPMX19_01394 +0.9 1.5 hypothetical protein compare
MPMX19_02424 +0.9 3.4 hypothetical protein compare
MPMX19_06297 +0.8 1.9 hypothetical protein compare
MPMX19_06207 +0.8 3.6 hypothetical protein compare
MPMX19_03800 +0.8 2.0 hypothetical protein compare
MPMX19_05906 +0.8 2.3 hypothetical protein compare
MPMX19_04863 +0.8 2.5 Transcriptional regulatory protein LnrK compare
MPMX19_04726 +0.8 3.1 Glycine betaine/choline transport system permease protein OusW compare
MPMX19_01067 +0.8 2.1 hypothetical protein compare
MPMX19_04551 +0.8 1.9 HTH-type transcriptional repressor RspR compare
MPMX19_01401 +0.7 2.1 Ubiquinone biosynthesis accessory factor UbiK compare
MPMX19_00211 +0.7 2.8 putative copper-importing P-type ATPase A compare
MPMX19_00186 +0.7 1.8 hypothetical protein compare
MPMX19_01012 +0.7 2.5 Cyclic pyranopterin monophosphate synthase compare
MPMX19_03868 +0.7 3.2 Xylitol-binding protein compare
MPMX19_01073 +0.7 2.0 5'-nucleotidase compare
MPMX19_00839 +0.7 1.8 hypothetical protein compare
MPMX19_02348 +0.7 2.8 hypothetical protein compare
MPMX19_02811 +0.7 3.1 Long-chain-alcohol dehydrogenase 1 compare
MPMX19_00166 +0.6 1.8 hypothetical protein compare
MPMX19_03262 +0.6 2.3 putative HTH-type transcriptional repressor ExuR compare
MPMX19_04738 +0.6 2.2 hypothetical protein compare
MPMX19_00577 +0.6 3.2 Ribosomal RNA small subunit methyltransferase E compare
MPMX19_02801 +0.6 1.7 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_03756 +0.6 1.9 hypothetical protein compare
MPMX19_06509 +0.6 2.5 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_06535 +0.6 2.7 hypothetical protein compare
MPMX19_06519 +0.6 1.5 HTH-type transcriptional repressor NagR compare
MPMX19_02041 +0.6 2.1 Protein YciI compare
MPMX19_06843 +0.6 2.7 hypothetical protein compare
MPMX19_05581 +0.6 1.5 hypothetical protein compare
MPMX19_03072 +0.6 1.4 hypothetical protein compare
MPMX19_06520 +0.6 1.8 Nitrate import ATP-binding protein NrtC compare
MPMX19_06964 +0.6 2.9 HTH-type transcriptional regulator KipR compare
MPMX19_00074 +0.6 1.9 Electron transfer flavoprotein subunit beta compare
MPMX19_03001 +0.6 2.2 Ribulokinase compare
MPMX19_00344 +0.6 1.6 hypothetical protein compare
MPMX19_02987 +0.6 1.8 hypothetical protein compare
MPMX19_03069 +0.6 1.9 hypothetical protein compare
MPMX19_06488 +0.6 1.5 Taurine-binding periplasmic protein compare
MPMX19_02279 +0.6 2.0 hypothetical protein compare
MPMX19_00206 +0.6 4.1 Cytochrome c oxidase subunit 1, bacteroid compare
MPMX19_02484 +0.6 2.2 Heat-inducible transcription repressor HrcA compare
MPMX19_02538 +0.5 1.4 hypothetical protein compare
MPMX19_03846 +0.5 2.1 hypothetical protein compare
MPMX19_01811 +0.5 1.8 hypothetical protein compare
MPMX19_03308 +0.5 2.3 hypothetical protein compare
MPMX19_02866 +0.5 2.2 4-hydroxymandelate oxidase compare
MPMX19_02313 +0.5 3.8 Oxygen-independent coproporphyrinogen III oxidase compare
MPMX19_00049 +0.5 2.4 hypothetical protein compare
MPMX19_00212 +0.5 4.5 Nitrogen fixation regulation protein FixK compare
MPMX19_00600 +0.5 2.2 hypothetical protein compare
MPMX19_05623 +0.5 2.2 Photosynthetic apparatus regulatory protein RegA compare
MPMX19_04986 +0.5 2.0 hypothetical protein compare
MPMX19_05586 +0.5 1.0 hypothetical protein compare
MPMX19_04792 +0.5 1.8 hypothetical protein compare
MPMX19_06896 +0.5 2.2 L-aspartate oxidase compare
MPMX19_06773 +0.5 2.1 2-(R)-hydroxypropyl-CoM dehydrogenase compare
MPMX19_05181 +0.5 1.2 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_03694 +0.5 0.9 hypothetical protein compare
MPMX19_05748 +0.5 1.9 Response regulator SaeR compare
MPMX19_03629 +0.5 2.7 hypothetical protein compare
MPMX19_05152 +0.5 1.3 Phosphonoacetaldehyde hydrolase compare
MPMX19_02320 +0.5 1.3 HTH-type transcriptional regulator GltR compare
MPMX19_06862 +0.5 1.5 hypothetical protein compare
MPMX19_00008 +0.5 1.6 hypothetical protein compare
MPMX19_06888 +0.5 2.0 hypothetical protein compare
MPMX19_05534 +0.5 1.2 DNA gyrase inhibitor YacG compare
MPMX19_00619 +0.5 1.6 Diacetyl reductase [(S)-acetoin forming] compare
MPMX19_00005 +0.5 1.8 hypothetical protein compare
MPMX19_02063 +0.5 2.2 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_00875 +0.5 1.8 hypothetical protein compare
MPMX19_06514 +0.5 3.2 L-methionine gamma-lyase compare
MPMX19_05020 +0.4 3.4 Acetyl-/propionyl-coenzyme A carboxylase alpha chain compare
MPMX19_06569 +0.4 1.6 hypothetical protein compare
MPMX19_01917 +0.4 1.5 hypothetical protein compare
MPMX19_05528 +0.4 2.3 hypothetical protein compare
MPMX19_03803 +0.4 1.7 hypothetical protein compare
MPMX19_06661 +0.4 2.4 hypothetical protein compare
MPMX19_01609 +0.4 1.6 hypothetical protein compare
MPMX19_00044 +0.4 1.9 hypothetical protein compare
MPMX19_03811 +0.4 2.1 hypothetical protein compare
MPMX19_06990 +0.4 1.8 NADH oxidase compare
MPMX19_05036 +0.4 2.5 hypothetical protein compare
MPMX19_06874 +0.4 1.2 hypothetical protein compare
MPMX19_06928 +0.4 0.9 hypothetical protein compare
MPMX19_06759 +0.4 1.1 Taurine import ATP-binding protein TauB compare
MPMX19_00976 +0.4 1.2 ATP-dependent RNA helicase RhlE compare
MPMX19_06020 +0.4 2.4 hypothetical protein compare
MPMX19_04699 +0.4 1.8 hypothetical protein compare
MPMX19_06179 +0.4 1.1 putative SURF1-like protein compare
MPMX19_05375 +0.4 2.0 hypothetical protein compare
MPMX19_06510 +0.4 1.5 Aliphatic sulfonates import ATP-binding protein SsuB compare
MPMX19_03331 +0.4 1.8 hypothetical protein compare
MPMX19_03883 +0.4 2.2 hypothetical protein compare
MPMX19_05016 +0.4 1.1 Sensor histidine kinase RcsC compare
MPMX19_01075 +0.4 1.0 Molybdopterin synthase sulfur carrier subunit compare
MPMX19_00841 +0.4 0.8 Holo-[acyl-carrier-protein] synthase compare
MPMX19_05402 +0.4 2.4 hypothetical protein compare
MPMX19_03916 +0.4 1.1 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
MPMX19_04985 +0.4 0.8 HTH-type transcriptional regulator DmlR compare
MPMX19_05229 +0.4 2.2 ECF RNA polymerase sigma factor RpoE compare
MPMX19_05483 +0.4 2.0 hypothetical protein compare
MPMX19_06526 +0.4 1.9 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_05019 +0.4 2.4 Propionyl-CoA carboxylase beta chain compare
MPMX19_02080 +0.4 2.3 Translation initiation factor IF-3 compare
MPMX19_03613 +0.4 1.4 N-acetylglucosamine-6-phosphate deacetylase compare
MPMX19_06646 +0.4 1.7 hypothetical protein compare
MPMX19_06355 +0.4 1.5 hypothetical protein compare
MPMX19_06886 +0.4 2.1 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_06299 +0.4 2.2 hypothetical protein compare
MPMX19_04948 +0.4 1.1 HTH-type transcriptional regulator GltR compare
MPMX19_03123 +0.4 0.8 Citrate lyase acyl carrier protein compare
MPMX19_01503 +0.4 1.4 hypothetical protein compare
MPMX19_03699 +0.4 1.4 Maltose/maltodextrin import ATP-binding protein MalK compare
MPMX19_06930 +0.4 0.8 Sensor kinase CckA compare
MPMX19_06096 +0.4 2.5 hypothetical protein compare
MPMX19_03093 +0.4 1.5 Manganese import ATP-binding protein ScaC compare
MPMX19_03789 +0.4 2.1 hypothetical protein compare
MPMX19_01622 +0.4 2.0 hypothetical protein compare
MPMX19_00464 +0.4 1.9 Ferredoxin-like protein FixX compare
MPMX19_03646 +0.4 2.1 Histidinol-phosphate aminotransferase compare
MPMX19_06309 +0.4 1.3 hypothetical protein compare
MPMX19_03728 +0.4 1.1 hypothetical protein compare
MPMX19_00942 +0.4 1.7 hypothetical protein compare
MPMX19_06853 +0.4 1.6 Glyoxylate/hydroxypyruvate reductase A compare
MPMX19_06456 +0.4 0.9 hypothetical protein compare
MPMX19_04786 +0.4 2.3 Thymidylate kinase compare
MPMX19_03350 +0.4 2.5 GTP 3',8-cyclase compare
MPMX19_05068 +0.4 1.3 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA compare
MPMX19_03492 +0.4 1.3 3'-5' exonuclease DinG compare
MPMX19_05005 +0.4 1.8 hypothetical protein compare
MPMX19_06959 +0.4 2.5 hypothetical protein compare
MPMX19_05169 +0.4 2.6 Vitamin B12-binding protein compare
MPMX19_00813 +0.4 0.9 HTH-type transcriptional regulator CysL compare
MPMX19_06281 +0.4 1.5 hypothetical protein compare
MPMX19_05362 +0.4 1.2 hypothetical protein compare
MPMX19_03092 +0.4 1.9 High-affinity zinc uptake system membrane protein ZnuB compare
MPMX19_01866 +0.4 1.7 Sulfur carrier protein CysO compare
MPMX19_04670 +0.4 1.7 hypothetical protein compare
MPMX19_00809 +0.4 1.7 Autoinducer 2 sensor kinase/phosphatase LuxQ compare
MPMX19_04913 +0.4 0.9 hypothetical protein compare
MPMX19_05428 +0.4 1.8 PCP degradation transcriptional activation protein compare
MPMX19_06187 +0.4 1.8 hypothetical protein compare
MPMX19_05043 +0.4 1.9 hypothetical protein compare
MPMX19_05162 +0.4 1.5 Ferrous-iron efflux pump FieF compare
MPMX19_02109 +0.4 1.7 hypothetical protein compare
MPMX19_00319 +0.4 0.8 hypothetical protein compare
MPMX19_01627 +0.4 1.8 hypothetical protein compare
MPMX19_00716 +0.4 2.2 Hydrogenase maturation factor HypD compare
MPMX19_05436 +0.3 1.9 putative isomerase YddE compare
MPMX19_02094 +0.3 1.5 hypothetical protein compare
MPMX19_03265 +0.3 2.4 Spermidine/putrescine import ATP-binding protein PotA compare
MPMX19_04731 +0.3 1.7 hypothetical protein compare
MPMX19_03665 +0.3 2.0 hypothetical protein compare
MPMX19_06776 +0.3 1.5 hypothetical protein compare
MPMX19_04638 +0.3 1.0 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_06195 +0.3 1.1 hypothetical protein compare
MPMX19_06961 +0.3 2.2 Acetyl-CoA:oxalate CoA-transferase compare
MPMX19_06202 +0.3 1.0 hypothetical protein compare
MPMX19_03866 +0.3 0.9 Ribose import permease protein RbsC compare
MPMX19_06255 +0.3 1.7 hypothetical protein compare
MPMX19_02733 +0.3 2.2 Regulatory protein LuxO compare
MPMX19_03900 +0.3 1.6 Hca operon transcriptional activator HcaR compare
MPMX19_05393 +0.3 1.0 hypothetical protein compare
MPMX19_05762 +0.3 1.2 hypothetical protein compare
MPMX19_01643 +0.3 2.0 hypothetical protein compare
MPMX19_03114 +0.3 1.3 hypothetical protein compare
MPMX19_02937 +0.3 0.9 hypothetical protein compare
MPMX19_03631 +0.3 0.7 hypothetical protein compare
MPMX19_06750 +0.3 1.5 Aliphatic sulfonates import ATP-binding protein SsuB compare
MPMX19_06537 +0.3 1.9 NADH-dependent FMN reductase SfnF compare
MPMX19_02492 +0.3 1.5 hypothetical protein compare
MPMX19_04723 +0.3 2.2 Protein FixB compare
MPMX19_06484 +0.3 2.0 hypothetical protein compare
MPMX19_01564 +0.3 1.8 hypothetical protein compare
MPMX19_05011 +0.3 1.7 tRNA (cytidine(34)-2'-O)-methyltransferase compare
MPMX19_06476 +0.3 1.7 HTH-type transcriptional regulator ArgP compare
MPMX19_06241 +0.3 1.6 hypothetical protein compare
MPMX19_04615 +0.3 1.0 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_05894 +0.3 1.9 hypothetical protein compare
MPMX19_06381 +0.3 0.8 putative manganese efflux pump MntP compare
MPMX19_04669 +0.3 1.1 Glucose 1-dehydrogenase compare
MPMX19_03549 +0.3 1.0 HTH-type transcriptional regulator PgrR compare
MPMX19_03169 +0.3 0.9 Dihydroanticapsin 7-dehydrogenase compare
MPMX19_00764 +0.3 1.1 ECF RNA polymerase sigma factor EcfG compare
MPMX19_06497 +0.3 1.3 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_04620 +0.3 1.5 HTH-type transcriptional regulator CynR compare
MPMX19_00460 +0.3 2.7 Sensor histidine kinase RcsC compare
MPMX19_03100 +0.3 1.5 hypothetical protein compare
MPMX19_00089 +0.3 1.1 hypothetical protein compare
MPMX19_01365 +0.3 0.7 hypothetical protein compare
MPMX19_00061 +0.3 1.2 L-lysine 2,3-aminomutase compare
MPMX19_04579 +0.3 1.3 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX19_05910 +0.3 1.7 hypothetical protein compare
MPMX19_05175 +0.3 1.3 hypothetical protein compare
MPMX19_03474 +0.3 1.7 hypothetical protein compare
MPMX19_04557 +0.3 1.8 Na(+)/H(+) antiporter NhaA compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nln experiments