Experiment set1S21 for Azospirillum sp. SherDot2

Compare to:

NLN

200 most important genes:

  gene name fitness t score description  
MPMX19_01884 -3.4 -4.6 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_02658 -3.3 -16.5 Glutamate synthase [NADPH] small chain compare
MPMX19_02657 -3.1 -21.9 Glutamate synthase [NADPH] large chain compare
MPMX19_01630 -3.0 -5.4 Phosphoribosylamine--glycine ligase compare
MPMX19_00530 -3.0 -4.5 Orotate phosphoribosyltransferase compare
MPMX19_01883 -2.8 -10.0 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_00606 -2.7 -8.2 3-isopropylmalate dehydratase small subunit 1 compare
MPMX19_02543 -2.7 -3.1 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_01054 -2.6 -6.4 Aspartate carbamoyltransferase compare
MPMX19_03647 -2.6 -6.9 N-acetylglucosamine repressor compare
MPMX19_02736 -2.5 -12.9 Tryptophan synthase beta chain compare
MPMX19_01304 -2.4 -12.0 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_02207 -2.4 -3.8 N-(5'-phosphoribosyl)anthranilate isomerase compare
MPMX19_00607 -2.4 -12.5 3-isopropylmalate dehydrogenase compare
MPMX19_02981 -2.2 -7.1 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_00906 -2.2 -13.6 Amidophosphoribosyltransferase compare
MPMX19_03654 -2.1 -3.7 Fructokinase compare
MPMX19_00126 -2.0 -4.4 hypothetical protein compare
MPMX19_01822 -2.0 -7.0 2-isopropylmalate synthase compare
MPMX19_01939 -2.0 -4.8 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
MPMX19_00635 -1.9 -11.3 5,10-methylenetetrahydrofolate reductase compare
MPMX19_04391 -1.9 -9.0 Homoserine O-acetyltransferase compare
MPMX19_01998 -1.9 -6.5 3-isopropylmalate dehydratase large subunit compare
MPMX19_05727 -1.9 -8.1 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_02737 -1.9 -7.7 Tryptophan synthase alpha chain compare
MPMX19_01053 -1.9 -4.7 Dihydroorotase compare
MPMX19_02267 -1.8 -2.1 hypothetical protein compare
MPMX19_00128 -1.8 -11.3 hypothetical protein compare
MPMX19_01015 -1.7 -5.5 Anthranilate phosphoribosyltransferase compare
MPMX19_01364 -1.7 -11.4 O-succinylhomoserine sulfhydrylase compare
MPMX19_02980 -1.7 -2.4 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_01014 -1.6 -5.7 Indole-3-glycerol phosphate synthase compare
MPMX19_04392 -1.6 -3.2 Bifunctional methionine biosynthesis protein MetXA/MetW compare
MPMX19_01084 -1.6 -5.1 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_04207 -1.6 -4.2 hypothetical protein compare
MPMX19_02268 -1.5 -3.9 hypothetical protein compare
MPMX19_01409 -1.5 -8.5 Carbonic anhydrase 1 compare
MPMX19_05680 -1.4 -4.2 Cell cycle response regulator CtrA compare
MPMX19_04208 -1.4 -4.1 flagellum biosynthesis repressor protein FlbT compare
MPMX19_00632 -1.4 -4.5 Intermembrane phospholipid transport system binding protein MlaC compare
MPMX19_06050 -1.4 -11.3 Phosphoenolpyruvate carboxylase compare
MPMX19_04115 -1.2 -1.4 Sensor histidine kinase RcsC compare
MPMX19_01610 -1.2 -2.5 ATP-dependent DNA helicase PcrA compare
MPMX19_04968 -1.2 -1.8 hypothetical protein compare
MPMX19_01560 -1.2 -2.2 3'-5' exonuclease DinG compare
MPMX19_01495 -1.2 -2.3 hypothetical protein compare
MPMX19_01297 -1.2 -2.2 hypothetical protein compare
MPMX19_03653 -1.2 -5.1 Mannitol 2-dehydrogenase compare
MPMX19_06179 -1.1 -2.1 putative SURF1-like protein compare
MPMX19_02162 -1.1 -8.3 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX19_01777 -1.1 -2.1 2-aminoadipate transaminase compare
MPMX19_03069 -1.1 -2.3 hypothetical protein compare
MPMX19_04079 -1.1 -1.7 hypothetical protein compare
MPMX19_03165 -1.1 -2.8 hypothetical protein compare
MPMX19_05119 -1.0 -7.7 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_02664 -1.0 -1.5 Arabinose 5-phosphate isomerase KdsD compare
MPMX19_02618 -1.0 -1.8 Transcriptional regulatory protein BaeR compare
MPMX19_03072 -1.0 -1.4 hypothetical protein compare
MPMX19_04869 -1.0 -3.7 DNA polymerase I compare
MPMX19_00634 -1.0 -5.7 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial compare
MPMX19_02123 -1.0 -2.7 Glycerol-3-phosphate dehydrogenase [NAD(P)+] compare
MPMX19_05272 -0.9 -2.4 hypothetical protein compare
MPMX19_00653 -0.9 -4.3 hypothetical protein compare
MPMX19_01113 -0.9 -2.0 Adaptive-response sensory-kinase SasA compare
MPMX19_06580 -0.9 -4.8 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_03722 -0.9 -2.0 hypothetical protein compare
MPMX19_00652 -0.9 -7.7 Sulfite reductase [ferredoxin] compare
MPMX19_06277 -0.9 -6.4 hypothetical protein compare
MPMX19_04171 -0.9 -1.6 16S ribosomal RNA compare
MPMX19_01394 -0.9 -1.4 hypothetical protein compare
MPMX19_00705 -0.9 -2.3 Cell division coordinator CpoB compare
MPMX19_05831 -0.9 -2.4 Protein/nucleic acid deglycase 2 compare
MPMX19_05387 -0.9 -2.4 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
MPMX19_00633 -0.9 -4.3 Intermembrane phospholipid transport system lipoprotein MlaA compare
MPMX19_00156 -0.9 -3.4 hypothetical protein compare
MPMX19_02951 -0.8 -1.8 Deoxyribose-phosphate aldolase 1 compare
MPMX19_03649 -0.8 -4.5 Trehalose transport system permease protein SugA compare
MPMX19_04112 -0.8 -3.1 hypothetical protein compare
MPMX19_05445 -0.8 -2.3 tRNA-Glu compare
MPMX19_06275 -0.8 -6.1 Argininosuccinate lyase compare
MPMX19_01669 -0.8 -3.5 Transcriptional regulator MraZ compare
MPMX19_05714 -0.8 -5.1 hypothetical protein compare
MPMX19_00576 -0.8 -1.9 hypothetical protein compare
MPMX19_06090 -0.8 -1.8 Pyruvate dehydrogenase complex repressor compare
MPMX19_03194 -0.8 -1.2 hypothetical protein compare
MPMX19_05442 -0.8 -2.0 Ribosomal large subunit pseudouridine synthase D compare
MPMX19_00148 -0.8 -2.1 hypothetical protein compare
MPMX19_04701 -0.8 -2.1 Transcriptional regulatory protein FixJ compare
MPMX19_01499 -0.8 -3.0 hypothetical protein compare
MPMX19_02979 -0.8 -2.8 Hydrogen cyanide synthase subunit HcnB compare
MPMX19_02227 -0.8 -6.1 Pyruvate, phosphate dikinase compare
MPMX19_03650 -0.8 -4.9 Diacetylchitobiose uptake system permease protein NgcG compare
MPMX19_04218 -0.8 -3.7 Protein phosphatase PrpC compare
MPMX19_01796 -0.8 -1.4 hypothetical protein compare
MPMX19_05997 -0.8 -2.1 hypothetical protein compare
MPMX19_04204 -0.8 -4.5 D-alanine--D-alanyl carrier protein ligase compare
MPMX19_04118 -0.7 -2.1 Sensor histidine kinase RcsC compare
MPMX19_05021 -0.7 -3.6 Methylmalonyl-CoA mutase compare
MPMX19_04092 -0.7 -4.1 Flagellar motor switch protein FliN compare
MPMX19_02962 -0.7 -3.5 hypothetical protein compare
MPMX19_04200 -0.7 -4.1 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase compare
MPMX19_04222 -0.7 -6.0 hypothetical protein compare
MPMX19_04199 -0.7 -4.6 Pseudaminic acid synthase compare
MPMX19_05100 -0.7 -2.3 hypothetical protein compare
MPMX19_01314 -0.7 -3.2 hypothetical protein compare
MPMX19_02511 -0.7 -1.1 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase compare
MPMX19_05454 -0.7 -1.5 hypothetical protein compare
MPMX19_01400 -0.7 -1.6 hypothetical protein compare
MPMX19_05333 -0.7 -1.4 Thymidine phosphorylase compare
MPMX19_05070 -0.7 -3.5 hypothetical protein compare
MPMX19_04354 -0.7 -1.8 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_00862 -0.7 -4.1 hypothetical protein compare
MPMX19_01277 -0.7 -3.6 hypothetical protein compare
MPMX19_06892 -0.7 -2.0 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_00650 -0.7 -3.8 Siroheme synthase compare
MPMX19_00904 -0.7 -3.9 DNA repair protein RadA compare
MPMX19_05677 -0.7 -2.4 hypothetical protein compare
MPMX19_01601 -0.7 -3.2 DNA repair protein RecN compare
MPMX19_00986 -0.7 -3.7 Ribonuclease D compare
MPMX19_04206 -0.6 -2.5 3-oxoacyl-[acyl-carrier-protein] synthase 3 compare
MPMX19_04465 -0.6 -4.4 Pantothenate synthetase compare
MPMX19_01703 -0.6 -1.4 hypothetical protein compare
MPMX19_01443 -0.6 -3.8 Regulator of RpoS compare
MPMX19_04835 -0.6 -1.8 hypothetical protein compare
MPMX19_06966 -0.6 -1.9 hypothetical protein compare
MPMX19_05023 -0.6 -1.2 hypothetical protein compare
MPMX19_04094 -0.6 -4.1 Flagellar M-ring protein compare
MPMX19_03787 -0.6 -1.5 hypothetical protein compare
MPMX19_05034 -0.6 -1.8 ATP synthase subunit c compare
MPMX19_05228 -0.6 -3.8 Anti-sigma-E factor ChrR compare
MPMX19_02875 -0.6 -1.9 hypothetical protein compare
MPMX19_01483 -0.6 -4.4 Flagellar basal-body rod protein FlgG compare
MPMX19_06141 -0.6 -2.1 Intermembrane phospholipid transport system permease protein MlaE compare
MPMX19_04119 -0.6 -1.8 hypothetical protein compare
MPMX19_02202 -0.6 -1.2 hypothetical protein compare
MPMX19_06150 -0.6 -2.6 Corrinoid adenosyltransferase compare
MPMX19_01477 -0.6 -4.4 DNA repair protein RecO compare
MPMX19_03652 -0.6 -2.6 Sorbitol dehydrogenase compare
MPMX19_00866 -0.6 -3.6 Flagellar biosynthetic protein FliR compare
MPMX19_04696 -0.6 -1.8 Na(+)/H(+) antiporter subunit C1 compare
MPMX19_01565 -0.6 -1.6 hypothetical protein compare
MPMX19_01704 -0.6 -1.2 hypothetical protein compare
MPMX19_02195 -0.6 -3.1 Recombination protein RecR compare
MPMX19_06790 -0.6 -2.3 D-amino acid dehydrogenase compare
MPMX19_04902 -0.6 -2.5 hypothetical protein compare
MPMX19_01648 -0.6 -2.5 hypothetical protein compare
MPMX19_00864 -0.6 -1.8 Flagellar hook-basal body complex protein FliE compare
MPMX19_06734 -0.6 -5.3 Alginate biosynthesis protein AlgA compare
MPMX19_06547 -0.6 -2.5 hypothetical protein compare
MPMX19_02607 -0.6 -2.2 hypothetical protein compare
MPMX19_00790 -0.6 -1.2 hypothetical protein compare
MPMX19_03504 -0.6 -1.5 Sulfur carrier protein FdhD compare
MPMX19_06577 -0.6 -4.5 hypothetical protein compare
MPMX19_03195 -0.6 -0.9 hypothetical protein compare
MPMX19_03788 -0.6 -3.1 hypothetical protein compare
MPMX19_04223 -0.6 -4.6 hypothetical protein compare
MPMX19_04000 -0.6 -2.1 Flagellar motor switch protein FliG compare
MPMX19_06028 -0.6 -2.0 hypothetical protein compare
MPMX19_04647 -0.6 -1.1 hypothetical protein compare
MPMX19_00863 -0.6 -3.4 Flagellar basal-body rod protein FlgC compare
MPMX19_04554 -0.6 -2.0 Response regulator PleD compare
MPMX19_04114 -0.6 -1.9 hypothetical protein compare
MPMX19_06885 -0.6 -1.4 Nitrate import ATP-binding protein NrtD compare
MPMX19_06644 -0.6 -4.9 GDP-mannose 4,6-dehydratase compare
MPMX19_02392 -0.6 -4.8 Aspartate/prephenate aminotransferase compare
MPMX19_00433 -0.6 -2.6 Lysine/ornithine decarboxylase compare
MPMX19_05127 -0.6 -2.2 hypothetical protein compare
MPMX19_05684 -0.6 -3.5 Chemotaxis protein methyltransferase 1 compare
MPMX19_00157 -0.6 -4.0 hypothetical protein compare
MPMX19_00263 -0.6 -1.3 hypothetical protein compare
MPMX19_02702 -0.6 -2.2 hypothetical protein compare
MPMX19_00647 -0.5 -4.5 Bifunctional enzyme CysN/CysC compare
MPMX19_05618 -0.5 -1.5 putative manganese efflux pump MntP compare
MPMX19_01577 -0.5 -1.9 hypothetical protein compare
MPMX19_06545 -0.5 -4.9 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase compare
MPMX19_04058 -0.5 -1.6 Aldehyde oxidoreductase iron-sulfur-binding subunit PaoA compare
MPMX19_01718 -0.5 -1.3 Ribosomal large subunit pseudouridine synthase C compare
MPMX19_05294 -0.5 -2.3 hypothetical protein compare
MPMX19_06001 -0.5 -2.5 hypothetical protein compare
MPMX19_03648 -0.5 -3.7 hypothetical protein compare
MPMX19_06382 -0.5 -2.2 putative MFS-type transporter YfcJ compare
MPMX19_00794 -0.5 -1.8 Transcriptional activator protein CopR compare
MPMX19_02860 -0.5 -1.7 hypothetical protein compare
MPMX19_03342 -0.5 -1.2 hypothetical protein compare
MPMX19_05313 -0.5 -1.1 4,4'-diapolycopene aldehyde oxidase compare
MPMX19_02927 -0.5 -1.8 5,6,7,8-tetrahydromethanopterin hydro-lyase compare
MPMX19_00858 -0.5 -1.9 Flagellar biosynthetic protein FliP compare
MPMX19_04093 -0.5 -1.9 hypothetical protein compare
MPMX19_00693 -0.5 -2.9 5-formyltetrahydrofolate cyclo-ligase compare
MPMX19_03724 -0.5 -0.9 hypothetical protein compare
MPMX19_06930 -0.5 -0.9 Sensor kinase CckA compare
MPMX19_04535 -0.5 -1.4 Maleate isomerase compare
MPMX19_02134 -0.5 -2.8 Phage shock protein C compare
MPMX19_02118 -0.5 -1.9 hypothetical protein compare
MPMX19_00609 -0.5 -1.8 Chemotaxis protein CheY compare
MPMX19_03096 -0.5 -1.0 hypothetical protein compare
MPMX19_00123 -0.5 -4.1 ATP-dependent DNA helicase RecQ compare
MPMX19_00181 -0.5 -2.1 hypothetical protein compare
MPMX19_04458 -0.5 -1.2 2-hydroxy-3-oxopropionate reductase compare
MPMX19_01149 -0.5 -2.6 Polyphosphate kinase compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nln experiments