Experiment set1S19 for Azospirillum sp. SherDot2

Compare to:

NLN

200 most important genes:

  gene name fitness t score description  
MPMX19_02658 -3.3 -16.2 Glutamate synthase [NADPH] small chain compare
MPMX19_01630 -3.2 -5.3 Phosphoribosylamine--glycine ligase compare
MPMX19_01884 -3.0 -4.6 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_02657 -3.0 -21.4 Glutamate synthase [NADPH] large chain compare
MPMX19_01883 -2.9 -10.3 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_05727 -2.8 -9.7 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_03647 -2.6 -7.4 N-acetylglucosamine repressor compare
MPMX19_00607 -2.6 -12.3 3-isopropylmalate dehydrogenase compare
MPMX19_00126 -2.6 -4.5 hypothetical protein compare
MPMX19_01084 -2.5 -6.2 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_01054 -2.4 -6.4 Aspartate carbamoyltransferase compare
MPMX19_02267 -2.4 -1.6 hypothetical protein compare
MPMX19_02737 -2.4 -8.5 Tryptophan synthase alpha chain compare
MPMX19_04391 -2.4 -9.8 Homoserine O-acetyltransferase compare
MPMX19_01053 -2.3 -4.9 Dihydroorotase compare
MPMX19_02736 -2.2 -12.4 Tryptophan synthase beta chain compare
MPMX19_02981 -2.2 -7.1 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_00906 -2.2 -13.0 Amidophosphoribosyltransferase compare
MPMX19_02543 -2.1 -3.2 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_00128 -2.1 -13.8 hypothetical protein compare
MPMX19_01304 -2.1 -10.7 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_01822 -2.1 -6.7 2-isopropylmalate synthase compare
MPMX19_01939 -2.0 -4.4 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
MPMX19_01998 -1.9 -6.5 3-isopropylmalate dehydratase large subunit compare
MPMX19_00635 -1.9 -11.1 5,10-methylenetetrahydrofolate reductase compare
MPMX19_00606 -1.9 -7.3 3-isopropylmalate dehydratase small subunit 1 compare
MPMX19_02207 -1.9 -2.8 N-(5'-phosphoribosyl)anthranilate isomerase compare
MPMX19_01014 -1.7 -5.7 Indole-3-glycerol phosphate synthase compare
MPMX19_00705 -1.7 -3.5 Cell division coordinator CpoB compare
MPMX19_04392 -1.7 -3.1 Bifunctional methionine biosynthesis protein MetXA/MetW compare
MPMX19_01409 -1.7 -9.6 Carbonic anhydrase 1 compare
MPMX19_00530 -1.7 -4.0 Orotate phosphoribosyltransferase compare
MPMX19_01714 -1.6 -2.1 tRNA-modifying protein YgfZ compare
MPMX19_06050 -1.6 -12.8 Phosphoenolpyruvate carboxylase compare
MPMX19_02268 -1.5 -4.1 hypothetical protein compare
MPMX19_01015 -1.5 -5.0 Anthranilate phosphoribosyltransferase compare
MPMX19_01560 -1.5 -3.3 3'-5' exonuclease DinG compare
MPMX19_04208 -1.5 -3.9 flagellum biosynthesis repressor protein FlbT compare
MPMX19_01364 -1.5 -10.2 O-succinylhomoserine sulfhydrylase compare
MPMX19_02123 -1.5 -4.6 Glycerol-3-phosphate dehydrogenase [NAD(P)+] compare
MPMX19_01748 -1.4 -2.1 hypothetical protein compare
MPMX19_05680 -1.4 -4.0 Cell cycle response regulator CtrA compare
MPMX19_03654 -1.4 -3.1 Fructokinase compare
MPMX19_02303 -1.3 -2.8 hypothetical protein compare
MPMX19_06878 -1.3 -3.6 Putative amino-acid ABC transporter-binding protein YhdW compare
MPMX19_05207 -1.3 -1.8 Hemolysin secretion protein D, plasmid compare
MPMX19_03652 -1.2 -3.9 Sorbitol dehydrogenase compare
MPMX19_02162 -1.2 -9.0 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX19_03195 -1.2 -2.1 hypothetical protein compare
MPMX19_00633 -1.2 -5.7 Intermembrane phospholipid transport system lipoprotein MlaA compare
MPMX19_01777 -1.2 -1.9 2-aminoadipate transaminase compare
MPMX19_05725 -1.2 -2.2 hypothetical protein compare
MPMX19_00653 -1.2 -4.9 hypothetical protein compare
MPMX19_01610 -1.2 -1.3 ATP-dependent DNA helicase PcrA compare
MPMX19_02979 -1.1 -3.9 Hydrogen cyanide synthase subunit HcnB compare
MPMX19_01113 -1.1 -2.0 Adaptive-response sensory-kinase SasA compare
MPMX19_00182 -1.0 -1.9 hypothetical protein compare
MPMX19_03653 -1.0 -4.7 Mannitol 2-dehydrogenase compare
MPMX19_06150 -1.0 -3.7 Corrinoid adenosyltransferase compare
MPMX19_00652 -1.0 -8.6 Sulfite reductase [ferredoxin] compare
MPMX19_05119 -1.0 -7.5 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_04647 -1.0 -2.5 hypothetical protein compare
MPMX19_06141 -1.0 -2.6 Intermembrane phospholipid transport system permease protein MlaE compare
MPMX19_03649 -1.0 -5.7 Trehalose transport system permease protein SugA compare
MPMX19_04205 -1.0 -3.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_03650 -1.0 -5.9 Diacetylchitobiose uptake system permease protein NgcG compare
MPMX19_04701 -0.9 -1.6 Transcriptional regulatory protein FixJ compare
MPMX19_00304 -0.9 -2.4 Phosphatidylcholine synthase compare
MPMX19_06275 -0.9 -6.5 Argininosuccinate lyase compare
MPMX19_00366 -0.9 -3.5 hypothetical protein compare
MPMX19_06277 -0.9 -6.2 hypothetical protein compare
MPMX19_04869 -0.9 -3.1 DNA polymerase I compare
MPMX19_04206 -0.9 -4.1 3-oxoacyl-[acyl-carrier-protein] synthase 3 compare
MPMX19_04115 -0.9 -1.6 Sensor histidine kinase RcsC compare
MPMX19_00144 -0.9 -2.9 hypothetical protein compare
MPMX19_06399 -0.9 -2.5 hypothetical protein compare
MPMX19_01277 -0.9 -4.4 hypothetical protein compare
MPMX19_04204 -0.9 -5.2 D-alanine--D-alanyl carrier protein ligase compare
MPMX19_03635 -0.9 -1.2 DNA-binding transcriptional activator DecR compare
MPMX19_01499 -0.8 -2.9 hypothetical protein compare
MPMX19_02980 -0.8 -1.7 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_05387 -0.8 -1.6 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
MPMX19_00167 -0.8 -1.8 hypothetical protein compare
MPMX19_00693 -0.8 -4.2 5-formyltetrahydrofolate cyclo-ligase compare
MPMX19_06966 -0.8 -2.3 hypothetical protein compare
MPMX19_04042 -0.8 -2.8 hypothetical protein compare
MPMX19_01297 -0.8 -1.7 hypothetical protein compare
MPMX19_04615 -0.8 -1.6 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_00933 -0.8 -2.1 hypothetical protein compare
MPMX19_03648 -0.8 -5.4 hypothetical protein compare
MPMX19_01495 -0.8 -1.6 hypothetical protein compare
MPMX19_05358 -0.8 -1.6 hypothetical protein compare
MPMX19_03787 -0.8 -1.5 hypothetical protein compare
MPMX19_01617 -0.8 -1.3 hypothetical protein compare
MPMX19_00634 -0.8 -4.7 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial compare
MPMX19_04861 -0.8 -1.9 hypothetical protein compare
MPMX19_00190 -0.8 -2.3 hypothetical protein compare
MPMX19_00838 -0.7 -1.8 GTP pyrophosphokinase rsh compare
MPMX19_04563 -0.7 -1.5 hypothetical protein compare
MPMX19_02320 -0.7 -1.5 HTH-type transcriptional regulator GltR compare
MPMX19_00181 -0.7 -2.8 hypothetical protein compare
MPMX19_06230 -0.7 -1.4 hypothetical protein compare
MPMX19_03096 -0.7 -1.6 hypothetical protein compare
MPMX19_04200 -0.7 -4.1 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase compare
MPMX19_01243 -0.7 -1.3 hypothetical protein compare
MPMX19_00025 -0.7 -1.2 hypothetical protein compare
MPMX19_06253 -0.7 -1.3 hypothetical protein compare
MPMX19_03295 -0.7 -1.9 HTH-type transcriptional regulator McbR compare
MPMX19_05111 -0.7 -2.2 PqqA binding protein compare
MPMX19_01395 -0.7 -1.6 hypothetical protein compare
MPMX19_00839 -0.7 -1.4 hypothetical protein compare
MPMX19_01545 -0.7 -1.0 Lon protease compare
MPMX19_01314 -0.7 -3.3 hypothetical protein compare
MPMX19_02664 -0.7 -1.1 Arabinose 5-phosphate isomerase KdsD compare
MPMX19_04000 -0.7 -2.3 Flagellar motor switch protein FliG compare
MPMX19_01153 -0.7 -1.8 hypothetical protein compare
MPMX19_00696 -0.7 -2.7 Crossover junction endodeoxyribonuclease RuvC compare
MPMX19_01597 -0.7 -1.2 23S rRNA (uridine(2479)-2'-O)-methyltransferase compare
MPMX19_00647 -0.7 -5.3 Bifunctional enzyme CysN/CysC compare
MPMX19_04079 -0.7 -1.4 hypothetical protein compare
MPMX19_06419 -0.7 -1.5 IS110 family transposase ISHne3 compare
MPMX19_05254 -0.7 -1.2 Carbon monoxide dehydrogenase small chain compare
MPMX19_02392 -0.7 -5.8 Aspartate/prephenate aminotransferase compare
MPMX19_03193 -0.7 -3.2 hypothetical protein compare
MPMX19_02580 -0.7 -1.5 Acetyltransferase compare
MPMX19_04114 -0.7 -2.2 hypothetical protein compare
MPMX19_03722 -0.7 -1.3 hypothetical protein compare
MPMX19_04289 -0.7 -4.0 hypothetical protein compare
MPMX19_03651 -0.7 -4.5 Maltose/maltodextrin import ATP-binding protein MalK compare
MPMX19_04949 -0.7 -2.8 Leu/Ile/Val-binding protein compare
MPMX19_03798 -0.7 -1.8 hypothetical protein compare
MPMX19_05719 -0.7 -1.6 hypothetical protein compare
MPMX19_05044 -0.7 -1.4 hypothetical protein compare
MPMX19_02105 -0.7 -1.5 hypothetical protein compare
MPMX19_02202 -0.7 -1.5 hypothetical protein compare
MPMX19_06969 -0.7 -2.0 hypothetical protein compare
MPMX19_00648 -0.7 -4.0 Sulfate adenylyltransferase subunit 2 compare
MPMX19_00650 -0.7 -3.6 Siroheme synthase compare
MPMX19_01321 -0.6 -2.2 tRNA-Cys compare
MPMX19_02511 -0.6 -1.1 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase compare
MPMX19_03141 -0.6 -1.5 hypothetical protein compare
MPMX19_04112 -0.6 -2.9 hypothetical protein compare
MPMX19_02618 -0.6 -1.6 Transcriptional regulatory protein BaeR compare
MPMX19_06988 -0.6 -2.6 hypothetical protein compare
MPMX19_01330 -0.6 -1.7 3-mercaptopyruvate sulfurtransferase compare
MPMX19_04087 -0.6 -1.4 Flagellum site-determining protein YlxH compare
MPMX19_00632 -0.6 -2.3 Intermembrane phospholipid transport system binding protein MlaC compare
MPMX19_05144 -0.6 -1.6 hypothetical protein compare
MPMX19_02527 -0.6 -2.4 hypothetical protein compare
MPMX19_06580 -0.6 -3.3 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_04222 -0.6 -5.1 hypothetical protein compare
MPMX19_06179 -0.6 -1.3 putative SURF1-like protein compare
MPMX19_06808 -0.6 -1.3 HTH-type transcriptional regulator DmlR compare
MPMX19_04477 -0.6 -2.1 hypothetical protein compare
MPMX19_01377 -0.6 -3.3 Outer membrane protein assembly factor BamA compare
MPMX19_04958 -0.6 -1.8 Methyl-accepting chemotaxis protein compare
MPMX19_01201 -0.6 -1.7 hypothetical protein compare
MPMX19_01149 -0.6 -3.0 Polyphosphate kinase compare
MPMX19_01796 -0.6 -1.3 hypothetical protein compare
MPMX19_04085 -0.6 -1.3 hypothetical protein compare
MPMX19_03128 -0.6 -2.4 hypothetical protein compare
MPMX19_06933 -0.6 -1.6 Manganese transport system ATP-binding protein MntB compare
MPMX19_03200 -0.6 -2.3 Transcriptional regulatory protein LiaR compare
MPMX19_02706 -0.6 -2.4 hypothetical protein compare
MPMX19_00163 -0.6 -2.2 hypothetical protein compare
MPMX19_05872 -0.6 -1.6 Redox-sensitive transcriptional activator SoxR compare
MPMX19_06460 -0.6 -1.4 DNA-invertase hin compare
MPMX19_06644 -0.6 -5.2 GDP-mannose 4,6-dehydratase compare
MPMX19_00904 -0.6 -3.5 DNA repair protein RadA compare
MPMX19_04422 -0.6 -2.9 Benzoate--CoA ligase compare
MPMX19_04673 -0.6 -1.8 Purine ribonucleoside efflux pump NepI compare
MPMX19_02227 -0.6 -4.6 Pyruvate, phosphate dikinase compare
MPMX19_06581 -0.6 -3.8 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 2 compare
MPMX19_04207 -0.6 -1.7 hypothetical protein compare
MPMX19_01729 -0.6 -1.0 Ethylmalonyl-CoA/methylmalonyl-CoA epimerase compare
MPMX19_01875 -0.6 -2.0 hypothetical protein compare
MPMX19_00748 -0.6 -2.0 Organic hydroperoxide resistance transcriptional regulator compare
MPMX19_01955 -0.6 -0.6 Putative anti-sigma factor antagonist compare
MPMX19_02011 -0.6 -1.5 RNA helicase CrhR compare
MPMX19_05389 -0.6 -2.5 Pyruvate kinase compare
MPMX19_01917 -0.5 -1.6 hypothetical protein compare
MPMX19_04864 -0.5 -1.6 hypothetical protein compare
MPMX19_05070 -0.5 -2.1 hypothetical protein compare
MPMX19_06547 -0.5 -2.9 hypothetical protein compare
MPMX19_02177 -0.5 -1.9 Succinylornithine transaminase/acetylornithine aminotransferase compare
MPMX19_05915 -0.5 -1.5 Flagellar M-ring protein compare
MPMX19_04359 -0.5 -1.9 Ferredoxin, 2Fe-2S compare
MPMX19_00020 -0.5 -1.0 hypothetical protein compare
MPMX19_05954 -0.5 -2.4 hypothetical protein compare
MPMX19_02978 -0.5 -2.5 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_04952 -0.5 -1.3 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_00862 -0.5 -3.6 hypothetical protein compare
MPMX19_04390 -0.5 -0.9 hypothetical protein compare
MPMX19_01523 -0.5 -2.3 Polar-differentiation response regulator DivK compare
MPMX19_04956 -0.5 -2.8 5-oxoprolinase subunit B compare
MPMX19_01990 -0.5 -4.1 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme compare
MPMX19_05921 -0.5 -1.2 hypothetical protein compare
MPMX19_05650 -0.5 -2.5 Ribonuclease HII compare
MPMX19_06885 -0.5 -1.4 Nitrate import ATP-binding protein NrtD compare
MPMX19_00794 -0.5 -1.7 Transcriptional activator protein CopR compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nln experiments