Experiment set1S19 for Azospirillum sp. SherDot2

Compare to:

NLN

200 most detrimental genes:

  gene name fitness t score description  
MPMX19_03728 +1.0 2.1 hypothetical protein compare
MPMX19_04449 +0.9 1.8 Inosine-5'-monophosphate dehydrogenase compare
MPMX19_06989 +0.8 2.8 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_02084 +0.8 2.1 hypothetical protein compare
MPMX19_00687 +0.8 2.3 hypothetical protein compare
MPMX19_04095 +0.8 3.6 hypothetical protein compare
MPMX19_00923 +0.8 2.6 hypothetical protein compare
MPMX19_01811 +0.7 2.0 hypothetical protein compare
MPMX19_01125 +0.7 1.3 hypothetical protein compare
MPMX19_03262 +0.7 2.1 putative HTH-type transcriptional repressor ExuR compare
MPMX19_00695 +0.7 2.6 putative transcriptional regulatory protein compare
MPMX19_05089 +0.7 3.2 Acetyl-CoA acetyltransferase compare
MPMX19_05220 +0.7 2.5 hypothetical protein compare
MPMX19_00577 +0.7 3.3 Ribosomal RNA small subunit methyltransferase E compare
MPMX19_05014 +0.7 2.0 Cytochrome c1 compare
MPMX19_03816 +0.7 2.2 hypothetical protein compare
MPMX19_01978 +0.6 1.2 hypothetical protein compare
MPMX19_00543 +0.6 2.0 Molybdenum cofactor guanylyltransferase compare
MPMX19_05016 +0.6 1.3 Sensor histidine kinase RcsC compare
MPMX19_06381 +0.6 1.5 putative manganese efflux pump MntP compare
MPMX19_06773 +0.6 2.7 2-(R)-hydroxypropyl-CoM dehydrogenase compare
MPMX19_05295 +0.6 1.2 hypothetical protein compare
MPMX19_03114 +0.6 2.5 hypothetical protein compare
MPMX19_00263 +0.6 2.1 hypothetical protein compare
MPMX19_05623 +0.6 2.3 Photosynthetic apparatus regulatory protein RegA compare
MPMX19_04913 +0.6 1.6 hypothetical protein compare
MPMX19_05581 +0.6 1.5 hypothetical protein compare
MPMX19_04743 +0.6 2.3 Formyltransferase/hydrolase complex subunit D compare
MPMX19_06759 +0.6 2.0 Taurine import ATP-binding protein TauB compare
MPMX19_04680 +0.6 2.1 Inner membrane ABC transporter permease protein YdcV compare
MPMX19_02424 +0.6 1.9 hypothetical protein compare
MPMX19_03476 +0.6 2.2 hypothetical protein compare
MPMX19_03972 +0.6 2.4 Enolase compare
MPMX19_06488 +0.5 1.7 Taurine-binding periplasmic protein compare
MPMX19_05104 +0.5 1.6 hypothetical protein compare
MPMX19_05143 +0.5 1.4 hypothetical protein compare
MPMX19_03462 +0.5 2.1 Acetate CoA-transferase subunit alpha compare
MPMX19_06385 +0.5 2.2 hypothetical protein compare
MPMX19_05622 +0.5 4.2 Sensor histidine kinase RegB compare
MPMX19_04990 +0.5 1.8 Hydrogen peroxide-inducible genes activator compare
MPMX19_03939 +0.5 1.9 Enoyl-CoA-hydratase compare
MPMX19_00718 +0.5 1.6 hypothetical protein compare
MPMX19_06497 +0.5 2.1 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_06610 +0.5 1.3 hypothetical protein compare
MPMX19_02318 +0.5 2.2 Inosine-5'-monophosphate dehydrogenase compare
MPMX19_06526 +0.5 2.1 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_04393 +0.5 1.7 hypothetical protein compare
MPMX19_00206 +0.5 3.7 Cytochrome c oxidase subunit 1, bacteroid compare
MPMX19_01401 +0.5 1.3 Ubiquinone biosynthesis accessory factor UbiK compare
MPMX19_04963 +0.5 1.2 Cysteine desulfurase IscS compare
MPMX19_05813 +0.5 1.7 2-hydroxy-3-oxopropionate reductase compare
MPMX19_02674 +0.5 1.3 NADH:quinone reductase compare
MPMX19_03439 +0.5 1.3 hypothetical protein compare
MPMX19_01480 +0.5 2.6 hypothetical protein compare
MPMX19_04898 +0.5 1.9 Transcriptional regulatory protein LnrK compare
MPMX19_06490 +0.5 0.9 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_02987 +0.5 1.3 hypothetical protein compare
MPMX19_00005 +0.5 2.0 hypothetical protein compare
MPMX19_03396 +0.5 2.1 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_03308 +0.5 2.0 hypothetical protein compare
MPMX19_03800 +0.5 1.6 hypothetical protein compare
MPMX19_00608 +0.5 0.8 hypothetical protein compare
MPMX19_02811 +0.5 2.1 Long-chain-alcohol dehydrogenase 1 compare
MPMX19_02769 +0.5 1.6 Ribokinase compare
MPMX19_04731 +0.5 2.3 hypothetical protein compare
MPMX19_01353 +0.5 1.6 hypothetical protein compare
MPMX19_02348 +0.5 1.7 hypothetical protein compare
MPMX19_06510 +0.5 1.6 Aliphatic sulfonates import ATP-binding protein SsuB compare
MPMX19_00212 +0.5 3.9 Nitrogen fixation regulation protein FixK compare
MPMX19_02313 +0.5 3.3 Oxygen-independent coproporphyrinogen III oxidase compare
MPMX19_01283 +0.5 1.3 hypothetical protein compare
MPMX19_06804 +0.5 1.0 hypothetical protein compare
MPMX19_01012 +0.5 1.6 Cyclic pyranopterin monophosphate synthase compare
MPMX19_05997 +0.5 1.7 hypothetical protein compare
MPMX19_02830 +0.5 2.2 N-carbamoyl-L-amino-acid hydrolase compare
MPMX19_00852 +0.4 0.7 hypothetical protein compare
MPMX19_02310 +0.4 1.7 hypothetical protein compare
MPMX19_06404 +0.4 1.8 hypothetical protein compare
MPMX19_00166 +0.4 1.1 hypothetical protein compare
MPMX19_00600 +0.4 2.4 hypothetical protein compare
MPMX19_05910 +0.4 2.1 hypothetical protein compare
MPMX19_05882 +0.4 1.8 hypothetical protein compare
MPMX19_02149 +0.4 1.6 hypothetical protein compare
MPMX19_00890 +0.4 1.6 hypothetical protein compare
MPMX19_03198 +0.4 1.8 hypothetical protein compare
MPMX19_03613 +0.4 1.6 N-acetylglucosamine-6-phosphate deacetylase compare
MPMX19_03822 +0.4 1.3 Sulfur carrier protein FdhD compare
MPMX19_02988 +0.4 1.9 hypothetical protein compare
MPMX19_04257 +0.4 3.0 D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase compare
MPMX19_03287 +0.4 2.2 6-aminohexanoate-cyclic-dimer hydrolase compare
MPMX19_04551 +0.4 0.9 HTH-type transcriptional repressor RspR compare
MPMX19_04531 +0.4 1.6 hypothetical protein compare
MPMX19_05837 +0.4 2.8 hypothetical protein compare
MPMX19_05176 +0.4 0.9 4-hydroxy-3-prenylphenylpyruvate oxygenase/4-hydroxy-3-prenylbenzoate synthase compare
MPMX19_00211 +0.4 1.6 putative copper-importing P-type ATPase A compare
MPMX19_03710 +0.4 1.6 Glycine cleavage system transcriptional activator compare
MPMX19_05762 +0.4 1.5 hypothetical protein compare
MPMX19_05656 +0.4 1.0 HTH-type transcriptional activator RhaR compare
MPMX19_00210 +0.4 2.2 hypothetical protein compare
MPMX19_04985 +0.4 1.1 HTH-type transcriptional regulator DmlR compare
MPMX19_06646 +0.4 1.5 hypothetical protein compare
MPMX19_03335 +0.4 1.4 hypothetical protein compare
MPMX19_01083 +0.4 1.7 hypothetical protein compare
MPMX19_06235 +0.4 1.6 Glycine cleavage system transcriptional activator compare
MPMX19_06967 +0.4 1.0 hypothetical protein compare
MPMX19_04734 +0.4 1.8 5,6,7,8-tetrahydromethanopterin hydro-lyase compare
MPMX19_06211 +0.4 1.4 tRNA-Ala compare
MPMX19_03299 +0.4 2.3 4-hydroxy-tetrahydrodipicolinate synthase compare
MPMX19_05314 +0.4 0.9 hypothetical protein compare
MPMX19_06763 +0.4 1.4 hypothetical protein compare
MPMX19_03298 +0.4 0.9 hypothetical protein compare
MPMX19_02181 +0.4 1.8 hypothetical protein compare
MPMX19_04119 +0.4 1.2 hypothetical protein compare
MPMX19_01717 +0.4 1.9 Pyrophosphatase PpaX compare
MPMX19_06004 +0.4 1.3 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_05095 +0.4 1.4 Toxin YoeB compare
MPMX19_05178 +0.4 1.9 Alkanesulfonate monooxygenase compare
MPMX19_06467 +0.4 1.8 hypothetical protein compare
MPMX19_04518 +0.4 2.0 Acetyl-CoA:oxalate CoA-transferase compare
MPMX19_04986 +0.4 1.6 hypothetical protein compare
MPMX19_04638 +0.4 0.8 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_05853 +0.4 1.5 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_05344 +0.4 2.4 HTH-type transcriptional regulator YofA compare
MPMX19_04699 +0.4 1.6 hypothetical protein compare
MPMX19_01075 +0.4 0.9 Molybdopterin synthase sulfur carrier subunit compare
MPMX19_04644 +0.4 1.0 hypothetical protein compare
MPMX19_03102 +0.4 2.2 hypothetical protein compare
MPMX19_02559 +0.4 1.3 7-methyl-GTP pyrophosphatase compare
MPMX19_06519 +0.4 0.7 HTH-type transcriptional repressor NagR compare
MPMX19_02787 +0.4 1.6 (R)-benzylsuccinyl-CoA dehydrogenase compare
MPMX19_01983 +0.4 1.7 ADP-dependent (S)-NAD(P)H-hydrate dehydratase compare
MPMX19_03707 +0.4 1.2 L-cystine import ATP-binding protein TcyC compare
MPMX19_05031 +0.4 2.1 ATP synthase gamma chain compare
MPMX19_01893 +0.4 1.6 Glutamine-dependent NAD(+) synthetase compare
MPMX19_05227 +0.4 2.1 hypothetical protein compare
MPMX19_04738 +0.4 1.2 hypothetical protein compare
MPMX19_04606 +0.4 1.8 Long-chain-alcohol dehydrogenase 1 compare
MPMX19_03277 +0.4 1.7 hypothetical protein compare
MPMX19_06456 +0.4 0.5 hypothetical protein compare
MPMX19_04726 +0.4 1.3 Glycine betaine/choline transport system permease protein OusW compare
MPMX19_06748 +0.4 1.8 Protein-glutamate methylesterase/protein-glutamine glutaminase of group 3 operon compare
MPMX19_02295 +0.4 2.2 Periplasmic nitrate reductase, electron transfer subunit compare
MPMX19_04896 +0.3 2.8 Outer membrane protein W compare
MPMX19_00209 +0.3 2.1 Cbb3-type cytochrome c oxidase subunit FixP compare
MPMX19_04299 +0.3 2.0 hypothetical protein compare
MPMX19_02514 +0.3 0.7 hypothetical protein compare
MPMX19_04995 +0.3 1.9 D-alanine aminotransferase compare
MPMX19_05896 +0.3 1.2 hypothetical protein compare
MPMX19_02164 +0.3 1.3 NADH pyrophosphatase compare
MPMX19_00572 +0.3 1.4 Type-4 uracil-DNA glycosylase compare
MPMX19_06907 +0.3 1.3 L-talarate/galactarate dehydratase compare
MPMX19_01197 +0.3 1.4 ECF RNA polymerase sigma factor EcfG compare
MPMX19_06197 +0.3 0.8 hypothetical protein compare
MPMX19_04863 +0.3 1.0 Transcriptional regulatory protein LnrK compare
MPMX19_02116 +0.3 0.9 Cold shock protein CspA compare
MPMX19_02806 +0.3 0.9 HTH-type transcriptional regulator DmlR compare
MPMX19_06217 +0.3 1.8 Fructose import ATP-binding protein FruK compare
MPMX19_02091 +0.3 1.6 hypothetical protein compare
MPMX19_06395 +0.3 1.3 Inner membrane protein YqaA compare
MPMX19_04633 +0.3 1.3 hypothetical protein compare
MPMX19_01005 +0.3 1.5 hypothetical protein compare
MPMX19_05755 +0.3 2.2 putative amino-acid metabolite efflux pump compare
MPMX19_04549 +0.3 1.7 L-cystine-binding protein FliY compare
MPMX19_02832 +0.3 2.2 putative cystine transporter YijE compare
MPMX19_04323 +0.3 1.1 Segregation and condensation protein B compare
MPMX19_04296 +0.3 1.9 hypothetical protein compare
MPMX19_04607 +0.3 2.3 hypothetical protein compare
MPMX19_03431 +0.3 2.1 hypothetical protein compare
MPMX19_01056 +0.3 2.0 hypothetical protein compare
MPMX19_01860 +0.3 1.3 hypothetical protein compare
MPMX19_05013 +0.3 1.6 Cytochrome b compare
MPMX19_03252 +0.3 1.5 hypothetical protein compare
MPMX19_05459 +0.3 0.7 hypothetical protein compare
MPMX19_03900 +0.3 1.5 Hca operon transcriptional activator HcaR compare
MPMX19_05075 +0.3 1.6 hypothetical protein compare
MPMX19_02885 +0.3 2.3 Citrate transporter compare
MPMX19_05199 +0.3 1.6 Zinc transport protein ZntB compare
MPMX19_01120 +0.3 2.0 Fructose-1, 6-bisphosphatase/inositol-1-monophosphatase compare
MPMX19_05860 +0.3 2.0 3-oxoadipate enol-lactonase 2 compare
MPMX19_02865 +0.3 1.4 hypothetical protein compare
MPMX19_02031 +0.3 0.9 tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ compare
MPMX19_02909 +0.3 1.7 Cytochrome c oxidase subunit 3 compare
MPMX19_03169 +0.3 0.9 Dihydroanticapsin 7-dehydrogenase compare
MPMX19_04051 +0.3 1.6 Alcohol dehydrogenase compare
MPMX19_01059 +0.3 0.4 hypothetical protein compare
MPMX19_00008 +0.3 1.1 hypothetical protein compare
MPMX19_00042 +0.3 2.3 hypothetical protein compare
MPMX19_03868 +0.3 1.0 Xylitol-binding protein compare
MPMX19_01061 +0.3 1.7 Glutathione-regulated potassium-efflux system protein KefC compare
MPMX19_00544 +0.3 0.7 hypothetical protein compare
MPMX19_03127 +0.3 1.1 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase compare
MPMX19_06326 +0.3 1.0 hypothetical protein compare
MPMX19_00495 +0.3 2.2 hypothetical protein compare
MPMX19_01196 +0.3 1.3 hypothetical protein compare
MPMX19_03069 +0.3 0.8 hypothetical protein compare
MPMX19_06788 +0.3 1.0 putative protein YiaX1 compare
MPMX19_06892 +0.3 1.1 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_05153 +0.3 2.3 4-methylaminobutanoate oxidase (formaldehyde-forming) compare
MPMX19_02929 +0.3 1.9 hypothetical protein compare
MPMX19_06872 +0.3 1.4 Short-chain-enoyl-CoA hydratase compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nln experiments