Experiment set1S13 for Azospirillum sp. SherDot2

Compare to:

NF

200 most detrimental genes:

  gene name fitness t score description  
MPMX19_03787 +1.6 2.3 hypothetical protein compare
MPMX19_04985 +1.1 1.7 HTH-type transcriptional regulator DmlR compare
MPMX19_01073 +1.0 4.1 5'-nucleotidase compare
MPMX19_05586 +1.0 2.0 hypothetical protein compare
MPMX19_05798 +0.9 2.3 HTH-type transcriptional repressor NanR compare
MPMX19_06808 +0.9 2.0 HTH-type transcriptional regulator DmlR compare
MPMX19_06539 +0.8 1.9 hypothetical protein compare
MPMX19_02634 +0.8 3.2 DNA-binding transcriptional regulator BolA compare
MPMX19_06281 +0.8 2.9 hypothetical protein compare
MPMX19_00186 +0.8 2.2 hypothetical protein compare
MPMX19_00813 +0.8 1.8 HTH-type transcriptional regulator CysL compare
MPMX19_02116 +0.8 2.3 Cold shock protein CspA compare
MPMX19_01978 +0.8 1.1 hypothetical protein compare
MPMX19_01727 +0.8 2.2 hypothetical protein compare
MPMX19_04161 +0.7 2.2 hypothetical protein compare
MPMX19_03916 +0.7 1.4 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
MPMX19_05779 +0.7 1.8 Beta-ketoadipyl-CoA thiolase compare
MPMX19_03123 +0.7 1.7 Citrate lyase acyl carrier protein compare
MPMX19_04551 +0.7 1.2 HTH-type transcriptional repressor RspR compare
MPMX19_03141 +0.7 2.1 hypothetical protein compare
MPMX19_06765 +0.7 1.8 Hydrogen peroxide-inducible genes activator compare
MPMX19_04726 +0.7 2.2 Glycine betaine/choline transport system permease protein OusW compare
MPMX19_03095 +0.7 1.4 hypothetical protein compare
MPMX19_03262 +0.6 1.7 putative HTH-type transcriptional repressor ExuR compare
MPMX19_06197 +0.6 1.2 hypothetical protein compare
MPMX19_06522 +0.6 2.5 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_03109 +0.6 2.3 hypothetical protein compare
MPMX19_01983 +0.6 2.6 ADP-dependent (S)-NAD(P)H-hydrate dehydratase compare
MPMX19_01614 +0.6 1.5 hypothetical protein compare
MPMX19_05726 +0.6 1.7 hypothetical protein compare
MPMX19_01956 +0.6 2.5 hypothetical protein compare
MPMX19_01059 +0.6 1.1 hypothetical protein compare
MPMX19_04118 +0.6 2.0 Sensor histidine kinase RcsC compare
MPMX19_06537 +0.6 3.1 NADH-dependent FMN reductase SfnF compare
MPMX19_01757 +0.6 3.2 Ferredoxin--NADP reductase compare
MPMX19_04088 +0.6 2.6 Signal recognition particle 54 kDa protein compare
MPMX19_02403 +0.6 3.0 hypothetical protein compare
MPMX19_03073 +0.6 1.6 hypothetical protein compare
MPMX19_05734 +0.6 2.6 Tol-Pal system protein TolQ compare
MPMX19_06467 +0.6 2.3 hypothetical protein compare
MPMX19_01421 +0.6 1.9 hypothetical protein compare
MPMX19_02999 +0.6 2.2 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_02511 +0.6 1.4 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase compare
MPMX19_02604 +0.6 2.6 Mycothiol acetyltransferase compare
MPMX19_01445 +0.6 2.1 hypothetical protein compare
MPMX19_06429 +0.6 2.0 HTH-type transcriptional regulator HmrR compare
MPMX19_05190 +0.6 2.7 putative malonic semialdehyde reductase RutE compare
MPMX19_03549 +0.6 1.9 HTH-type transcriptional regulator PgrR compare
MPMX19_03816 +0.6 1.6 hypothetical protein compare
MPMX19_03811 +0.6 2.7 hypothetical protein compare
MPMX19_01718 +0.6 1.2 Ribosomal large subunit pseudouridine synthase C compare
MPMX19_01217 +0.6 1.9 Ribosomal RNA small subunit methyltransferase C compare
MPMX19_03825 +0.6 0.6 IS5 family transposase IS4811 compare
MPMX19_06456 +0.5 1.0 hypothetical protein compare
MPMX19_03112 +0.5 2.9 Ribonuclease BN compare
MPMX19_03305 +0.5 2.0 L-fucose mutarotase compare
MPMX19_06807 +0.5 2.3 Solute-binding protein compare
MPMX19_06989 +0.5 1.0 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_01462 +0.5 2.6 hypothetical protein compare
MPMX19_00263 +0.5 1.3 hypothetical protein compare
MPMX19_05470 +0.5 1.7 hypothetical protein compare
MPMX19_06783 +0.5 1.9 5-keto-D-gluconate 5-reductase compare
MPMX19_05181 +0.5 1.3 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_06907 +0.5 1.5 L-talarate/galactarate dehydratase compare
MPMX19_03735 +0.5 1.8 Transposon Tn10 TetC protein compare
MPMX19_02706 +0.5 2.1 hypothetical protein compare
MPMX19_05313 +0.5 1.0 4,4'-diapolycopene aldehyde oxidase compare
MPMX19_01645 +0.5 1.0 HTH-type transcriptional regulator GltC compare
MPMX19_00544 +0.5 1.1 hypothetical protein compare
MPMX19_02987 +0.5 1.0 hypothetical protein compare
MPMX19_03558 +0.5 1.6 hypothetical protein compare
MPMX19_02531 +0.5 0.9 hypothetical protein compare
MPMX19_02380 +0.5 2.9 Periplasmic pH-dependent serine endoprotease DegQ compare
MPMX19_01847 +0.5 2.2 hypothetical protein compare
MPMX19_02727 +0.5 1.7 hypothetical protein compare
MPMX19_03823 +0.5 1.7 hypothetical protein compare
MPMX19_00790 +0.5 1.1 hypothetical protein compare
MPMX19_04913 +0.5 1.1 hypothetical protein compare
MPMX19_05459 +0.5 0.8 hypothetical protein compare
MPMX19_04633 +0.5 1.3 hypothetical protein compare
MPMX19_00173 +0.5 1.7 hypothetical protein compare
MPMX19_02466 +0.5 1.4 Octopine permease ATP-binding protein P compare
MPMX19_02241 +0.5 1.6 hypothetical protein compare
MPMX19_04390 +0.5 1.2 hypothetical protein compare
MPMX19_04799 +0.5 1.8 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_02091 +0.5 1.7 hypothetical protein compare
MPMX19_05623 +0.5 1.7 Photosynthetic apparatus regulatory protein RegA compare
MPMX19_05186 +0.5 2.6 Thiosulfate sulfurtransferase GlpE compare
MPMX19_04788 +0.5 2.8 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_01075 +0.5 0.9 Molybdopterin synthase sulfur carrier subunit compare
MPMX19_01047 +0.5 1.8 Transcriptional regulatory protein ros compare
MPMX19_04246 +0.5 1.6 hypothetical protein compare
MPMX19_03937 +0.5 1.6 Acyl-CoA dehydrogenase compare
MPMX19_03819 +0.4 1.8 NADP-reducing hydrogenase subunit HndA compare
MPMX19_04280 +0.4 1.2 hypothetical protein compare
MPMX19_06966 +0.4 1.0 hypothetical protein compare
MPMX19_06969 +0.4 0.8 hypothetical protein compare
MPMX19_00582 +0.4 2.6 hypothetical protein compare
MPMX19_05906 +0.4 1.0 hypothetical protein compare
MPMX19_05430 +0.4 1.2 HTH-type transcriptional regulator DmlR compare
MPMX19_04079 +0.4 1.0 hypothetical protein compare
MPMX19_00335 +0.4 1.0 Magnesium transport protein CorA compare
MPMX19_03676 +0.4 1.7 hypothetical protein compare
MPMX19_03776 +0.4 1.4 hypothetical protein compare
MPMX19_06569 +0.4 1.4 hypothetical protein compare
MPMX19_00491 +0.4 2.2 hypothetical protein compare
MPMX19_00812 +0.4 2.5 Molybdopterin molybdenumtransferase compare
MPMX19_06216 +0.4 1.2 Inner membrane ABC transporter permease protein YtfT compare
MPMX19_06490 +0.4 1.0 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_06776 +0.4 1.6 hypothetical protein compare
MPMX19_01755 +0.4 1.4 hypothetical protein compare
MPMX19_06492 +0.4 1.5 IS5 family transposase ISAzs10 compare
MPMX19_02937 +0.4 0.9 hypothetical protein compare
MPMX19_02866 +0.4 1.5 4-hydroxymandelate oxidase compare
MPMX19_02366 +0.4 2.4 hypothetical protein compare
MPMX19_06914 +0.4 0.8 Acyl-CoA dehydrogenase FadE27 compare
MPMX19_05034 +0.4 1.3 ATP synthase subunit c compare
MPMX19_04731 +0.4 1.9 hypothetical protein compare
MPMX19_02472 +0.4 1.4 hypothetical protein compare
MPMX19_01834 +0.4 1.1 hypothetical protein compare
MPMX19_02660 +0.4 1.7 Inner membrane protein YbjJ compare
MPMX19_04262 +0.4 2.1 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_01415 +0.4 1.3 hypothetical protein compare
MPMX19_02172 +0.4 1.7 putative GTPase compare
MPMX19_05221 +0.4 1.4 hypothetical protein compare
MPMX19_06975 +0.4 1.8 HTH-type transcriptional regulator HdfR compare
MPMX19_03111 +0.4 2.2 Putative fatty-acid--CoA ligase FadD21 compare
MPMX19_00822 +0.4 2.1 Divalent metal cation transporter MntH compare
MPMX19_06194 +0.4 2.0 Flagellar basal-body rod protein FlgC compare
MPMX19_05089 +0.4 1.4 Acetyl-CoA acetyltransferase compare
MPMX19_06342 +0.4 2.5 hypothetical protein compare
MPMX19_06266 +0.4 0.9 hypothetical protein compare
MPMX19_04392 +0.4 1.0 Bifunctional methionine biosynthesis protein MetXA/MetW compare
MPMX19_02788 +0.4 1.8 Gluconate 5-dehydrogenase compare
MPMX19_06355 +0.4 1.7 hypothetical protein compare
MPMX19_02581 +0.4 1.5 HTH-type transcriptional regulator SutR compare
MPMX19_06886 +0.4 1.6 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_00663 +0.4 0.8 hypothetical protein compare
MPMX19_00190 +0.4 1.4 hypothetical protein compare
MPMX19_06795 +0.4 0.9 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase compare
MPMX19_06309 +0.4 1.3 hypothetical protein compare
MPMX19_03623 +0.4 2.6 Ribose import permease protein RbsC compare
MPMX19_06485 +0.4 1.8 putative malonic semialdehyde reductase RutE compare
MPMX19_06979 +0.4 1.2 hypothetical protein compare
MPMX19_02880 +0.4 1.9 hypothetical protein compare
MPMX19_02851 +0.4 1.0 hypothetical protein compare
MPMX19_00297 +0.4 0.8 4-carboxy-4-hydroxy-2-oxoadipate aldolase compare
MPMX19_04591 +0.4 1.8 hypothetical protein compare
MPMX19_00088 +0.4 1.7 HTH-type transcriptional regulator HdfR compare
MPMX19_05188 +0.4 1.3 Aliphatic sulfonates import ATP-binding protein SsuB compare
MPMX19_00795 +0.4 1.8 Adaptive-response sensory-kinase SasA compare
MPMX19_04986 +0.4 1.0 hypothetical protein compare
MPMX19_05177 +0.4 1.3 Glyoxylate/hydroxypyruvate reductase A compare
MPMX19_04610 +0.4 0.8 putative enoyl-CoA hydratase 1 compare
MPMX19_06486 +0.4 1.4 Phenylacetate-coenzyme A ligase compare
MPMX19_06473 +0.4 2.2 Putative aliphatic sulfonates-binding protein compare
MPMX19_06526 +0.4 1.4 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_04902 +0.4 1.1 hypothetical protein compare
MPMX19_02062 +0.4 1.6 Maleylpyruvate isomerase compare
MPMX19_05231 +0.4 1.8 1,2-epoxyphenylacetyl-CoA isomerase compare
MPMX19_03298 +0.4 1.0 hypothetical protein compare
MPMX19_05282 +0.4 1.3 1,3,6,8-tetrahydroxynaphthalene synthase compare
MPMX19_04760 +0.4 1.7 Sialic acid TRAP transporter large permease protein SiaM compare
MPMX19_00573 +0.4 2.2 hypothetical protein compare
MPMX19_06165 +0.4 2.4 Amino acid--[acyl-carrier-protein] ligase compare
MPMX19_06484 +0.4 1.9 hypothetical protein compare
MPMX19_00458 +0.4 2.1 Leucine efflux protein compare
MPMX19_04085 +0.4 1.1 hypothetical protein compare
MPMX19_06471 +0.4 1.4 Glyoxylate/hydroxypyruvate reductase A compare
MPMX19_03491 +0.4 1.0 putative FAD-linked oxidoreductase compare
MPMX19_03683 +0.4 2.7 Fe(2+) transporter FeoB compare
MPMX19_02180 +0.4 1.4 hypothetical protein compare
MPMX19_00068 +0.4 1.4 hypothetical protein compare
MPMX19_05809 +0.4 1.4 NAD-dependent dihydropyrimidine dehydrogenase subunit PreT compare
MPMX19_02031 +0.4 0.9 tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ compare
MPMX19_00362 +0.4 1.2 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_03072 +0.4 0.5 hypothetical protein compare
MPMX19_04116 +0.4 2.0 Protein-glutamate methylesterase/protein-glutamine glutaminase of group 3 operon compare
MPMX19_04914 +0.4 1.9 hypothetical protein compare
MPMX19_05729 +0.3 2.1 hypothetical protein compare
MPMX19_00002 +0.3 2.4 Response regulator PleD compare
MPMX19_05588 +0.3 1.6 Galactose/methyl galactoside import ATP-binding protein MglA compare
MPMX19_03953 +0.3 1.8 High-affinity branched-chain amino acid transport system permease protein LivH compare
MPMX19_01617 +0.3 0.6 hypothetical protein compare
MPMX19_04508 +0.3 1.4 Phosphoglycolate phosphatase compare
MPMX19_06160 +0.3 2.0 Succinyl-diaminopimelate desuccinylase compare
MPMX19_06690 +0.3 1.5 hypothetical protein compare
MPMX19_03671 +0.3 1.9 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial compare
MPMX19_02765 +0.3 1.6 hypothetical protein compare
MPMX19_04755 +0.3 1.5 Ureidoglycolate lyase compare
MPMX19_00669 +0.3 2.0 hypothetical protein compare
MPMX19_01479 +0.3 1.7 hypothetical protein compare
MPMX19_02990 +0.3 2.1 hypothetical protein compare
MPMX19_04064 +0.3 2.0 hypothetical protein compare
MPMX19_02611 +0.3 1.2 hypothetical protein compare
MPMX19_03545 +0.3 1.5 Ectoine hydrolase compare
MPMX19_06510 +0.3 0.8 Aliphatic sulfonates import ATP-binding protein SsuB compare
MPMX19_01609 +0.3 0.9 hypothetical protein compare
MPMX19_00580 +0.3 1.4 hypothetical protein compare
MPMX19_02266 +0.3 1.3 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nf experiments